; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G003580 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G003580
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:3059482..3062575
RNA-Seq ExpressionLsi02G003580
SyntenyLsi02G003580
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152468.1 uncharacterized protein LOC101221499 isoform X1 [Cucumis sativus]1.9e-12184.5Show/hide
Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV
        MPGPGPHMLYAMGSGMALTTL+DGRFSPHHTL YT+NAFFGPDIGSFSDWLSSVLGFSASSVPD IHHPVFYILILGLPLCLFYSWLSSFLL KGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV

Query:  FG---------------------------ENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL
        FG                           ENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKS KSISKQSYQS+KL+VVVATL
Subjt:  FG---------------------------ENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL

Query:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL
        YS WCASQIYWASPRRPAVGEEADLGVLVFLV YFFLPHYLCIKSMQPKD E +HLPL
Subjt:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL

XP_004152469.1 uncharacterized protein LOC101221499 isoform X2 [Cucumis sativus]7.5e-12694.37Show/hide
Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV
        MPGPGPHMLYAMGSGMALTTL+DGRFSPHHTL YT+NAFFGPDIGSFSDWLSSVLGFSASSVPD IHHPVFYILILGLPLCLFYSWLSSFLL KGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV

Query:  FGENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATLYSTWCASQIYWASPRRPAVGEEADLGV
        FGENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKS KSISKQSYQS+KL+VVVATLYS WCASQIYWASPRRPAVGEEADLGV
Subjt:  FGENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATLYSTWCASQIYWASPRRPAVGEEADLGV

Query:  LVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL
        LVFLV YFFLPHYLCIKSMQPKD E +HLPL
Subjt:  LVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL

XP_008438226.1 PREDICTED: uncharacterized protein LOC103483387 isoform X2 [Cucumis melo]1.1e-12191.34Show/hide
Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV
        MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTL Y++NAFFGPDIGSFSDWLSSVLGF ASS+PDAIHHPVFYILILGLPLCLFYSWLSSFLL+KGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV

Query:  FGENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATLYSTWCASQIYWASPRRPAVGEEADLGV
         GENGHSSTYTWILSTGWWENRAPINPDAV VVGFLC CLIGGFVYINRVKS KSISKQ +QS+KL+VVVATLYS WCASQIYWASPRRPAVGEEAD GV
Subjt:  FGENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATLYSTWCASQIYWASPRRPAVGEEADLGV

Query:  LVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL
        LVFLV YFFLPHYLCIKSMQPKD E +HLPL
Subjt:  LVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL

XP_023000663.1 uncharacterized protein LOC111495033 [Cucurbita maxima]2.8e-12083.33Show/hide
Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV
        MPGPGPHMLYAMGSGMAL +L+DGRFSPHHTLIYT+NAFFGPDIGSFS+WLSSVLGFS SSVPDAIHHPVFYILILGLPLCLFY+WLSSFLL+KGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV

Query:  FG---------------------------ENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL
        FG                           ENGHSS YTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSI KQSYQS+KLI+VVATL
Subjt:  FG---------------------------ENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL

Query:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL
        YS WCASQIYWA+PRRPA GEEADLGVLVFL VYFFLPHYLCIKSMQPKDLEIRHLPL
Subjt:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL

XP_038893660.1 uncharacterized protein LOC120082528 isoform X1 [Benincasa hispida]1.7e-12285.66Show/hide
Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV
        MPGPGPHMLYAMGSG ALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFS SSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLL+SV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV

Query:  ---------------------------FGENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL
                                   F ENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINR KSAKSISKQSYQS+KLI+VVATL
Subjt:  ---------------------------FGENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL

Query:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL
        YS WCASQIYWASPRRPAVGEEADLGVLVFLV YFFLPHYLCIKSMQPKDLEI+HLPL
Subjt:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL

TrEMBL top hitse value%identityAlignment
A0A0A0LR72 Uncharacterized protein9.3e-12284.5Show/hide
Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV
        MPGPGPHMLYAMGSGMALTTL+DGRFSPHHTL YT+NAFFGPDIGSFSDWLSSVLGFSASSVPD IHHPVFYILILGLPLCLFYSWLSSFLL KGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV

Query:  FG---------------------------ENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL
        FG                           ENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKS KSISKQSYQS+KL+VVVATL
Subjt:  FG---------------------------ENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL

Query:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL
        YS WCASQIYWASPRRPAVGEEADLGVLVFLV YFFLPHYLCIKSMQPKD E +HLPL
Subjt:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL

A0A1S3AVZ4 uncharacterized protein LOC103483387 isoform X25.4e-12291.34Show/hide
Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV
        MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTL Y++NAFFGPDIGSFSDWLSSVLGF ASS+PDAIHHPVFYILILGLPLCLFYSWLSSFLL+KGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV

Query:  FGENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATLYSTWCASQIYWASPRRPAVGEEADLGV
         GENGHSSTYTWILSTGWWENRAPINPDAV VVGFLC CLIGGFVYINRVKS KSISKQ +QS+KL+VVVATLYS WCASQIYWASPRRPAVGEEAD GV
Subjt:  FGENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATLYSTWCASQIYWASPRRPAVGEEADLGV

Query:  LVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL
        LVFLV YFFLPHYLCIKSMQPKD E +HLPL
Subjt:  LVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL

A0A1S3AWH9 uncharacterized protein LOC103483387 isoform X11.4e-11781.78Show/hide
Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV
        MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTL Y++NAFFGPDIGSFSDWLSSVLGF ASS+PDAIHHPVFYILILGLPLCLFYSWLSSFLL+KGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV

Query:  ---------------------------FGENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL
                                   F ENGHSSTYTWILSTGWWENRAPINPDAV VVGFLC CLIGGFVYINRVKS KSISKQ +QS+KL+VVVATL
Subjt:  ---------------------------FGENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL

Query:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL
        YS WCASQIYWASPRRPAVGEEAD GVLVFLV YFFLPHYLCIKSMQPKD E +HLPL
Subjt:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL

A0A6J1EAR6 uncharacterized protein LOC1114314543.0e-12083.33Show/hide
Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV
        MPGPGPHMLYAMGSGMAL +L+DGRFSPHHTLIYT+NAFFGPDIGSFS+WLSSVLGFS SSVPDAIHHPVFYILILGLPLCLFY+WLSS LL+KGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV

Query:  FG---------------------------ENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL
        FG                           ENGHSS YTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSI KQSYQS+KLI+VVATL
Subjt:  FG---------------------------ENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL

Query:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL
        YS WCASQIYWA+PRRPAVGEEADLGVLVFL VYFFLPHYLCIKSMQPKDLEIRHLPL
Subjt:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL

A0A6J1KN89 uncharacterized protein LOC1114950331.3e-12083.33Show/hide
Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV
        MPGPGPHMLYAMGSGMAL +L+DGRFSPHHTLIYT+NAFFGPDIGSFS+WLSSVLGFS SSVPDAIHHPVFYILILGLPLCLFY+WLSSFLL+KGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV

Query:  FG---------------------------ENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL
        FG                           ENGHSS YTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSI KQSYQS+KLI+VVATL
Subjt:  FG---------------------------ENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL

Query:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL
        YS WCASQIYWA+PRRPA GEEADLGVLVFL VYFFLPHYLCIKSMQPKDLEIRHLPL
Subjt:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCGGACCTGGGCCTCACATGCTCTACGCCATGGGCTCAGGCATGGCTCTGACGACTCTCACCGACGGCCGATTCAGCCCCCACCATACCCTCATTTACACCGTCAA
CGCCTTCTTCGGCCCCGACATCGGCTCCTTCTCCGATTGGCTCTCTTCCGTACTCGGTTTCTCAGCTTCTTCCGTTCCCGATGCAATCCATCATCCCGTCTTCTACATCC
TTATTCTGGGTCTTCCTCTCTGCCTCTTCTACTCCTGGCTTTCCTCTTTTCTTCTCCAAAAGGGCCTTCTCGATTCCGTCTTTGGGGAAAACGGGCATTCATCAACATAC
ACTTGGATATTGAGCACTGGTTGGTGGGAGAACCGAGCACCAATCAATCCAGATGCTGTTATGGTTGTTGGATTCCTGTGCACTTGCTTAATCGGCGGCTTTGTTTACAT
TAACAGAGTGAAGTCTGCAAAGTCGATTTCGAAACAATCGTATCAGTCGTTAAAGCTTATCGTAGTTGTAGCTACCCTATATTCCACGTGGTGCGCAAGCCAGATATACT
GGGCTAGCCCTCGTCGACCAGCTGTCGGTGAAGAAGCCGACCTTGGAGTTTTAGTGTTTCTGGTTGTTTATTTTTTTCTACCTCATTATCTTTGTATAAAGTCCATGCAA
CCAAAAGATCTTGAAATCAGACATCTTCCATTGTGA
mRNA sequenceShow/hide mRNA sequence
CTTAATTGTTACCATCTTTAAAATATATGAATTAATTAATCCTTACTTCTTTAATATTTACCATAAAGAATCTCATCGACATTGACTTAATGCTTCCGTTCCCCTCGGCT
CTACTGAGTATTGAGATCGGAAAATTGGGTTCGACGGTGATCGTCGAGACGGAAGCGGAACCATGCCCGGACCTGGGCCTCACATGCTCTACGCCATGGGCTCAGGCATG
GCTCTGACGACTCTCACCGACGGCCGATTCAGCCCCCACCATACCCTCATTTACACCGTCAACGCCTTCTTCGGCCCCGACATCGGCTCCTTCTCCGATTGGCTCTCTTC
CGTACTCGGTTTCTCAGCTTCTTCCGTTCCCGATGCAATCCATCATCCCGTCTTCTACATCCTTATTCTGGGTCTTCCTCTCTGCCTCTTCTACTCCTGGCTTTCCTCTT
TTCTTCTCCAAAAGGGCCTTCTCGATTCCGTCTTTGGGGAAAACGGGCATTCATCAACATACACTTGGATATTGAGCACTGGTTGGTGGGAGAACCGAGCACCAATCAAT
CCAGATGCTGTTATGGTTGTTGGATTCCTGTGCACTTGCTTAATCGGCGGCTTTGTTTACATTAACAGAGTGAAGTCTGCAAAGTCGATTTCGAAACAATCGTATCAGTC
GTTAAAGCTTATCGTAGTTGTAGCTACCCTATATTCCACGTGGTGCGCAAGCCAGATATACTGGGCTAGCCCTCGTCGACCAGCTGTCGGTGAAGAAGCCGACCTTGGAG
TTTTAGTGTTTCTGGTTGTTTATTTTTTTCTACCTCATTATCTTTGTATAAAGTCCATGCAACCAAAAGATCTTGAAATCAGACATCTTCCATTGTGATAGGCGCATAAT
TTGTTAGCATATGTAGAATTCCGAGTTTCTCATGCATATTTGGAACCCATCGCTGACTTTGCGAAAGCAGGAAGAGAAAAAGCAGCAGTATGGATCTAAACAGCAGAATT
AAACAGCCAATTAGTTTAGATCTTAGAAGGGAGAAGCATAGCATAGGCTTATGAACAAATGTGAGCAAAAGAAAGAAGAAACCACCTCTGAGTTGTAGAACTTGGGGGGT
CCTTTTGCAACACCAAAATTTCCTGGATCCAACAGGTTCACGGGGCGTTTGAAGTCGACTGATGGACCGTCAGTTGAACAGAGCATGAAGCCGATCGCCCCACTGAATTT
GGATAATTTAGCAGGGAAGAAAGCCATTAGAAAACTCCAGATTGTGCAGAAACATAAAAGTAAAGAATTTTGGAAATGAAACAAAGCTAATATATGGTTTTGGTTGGGTT
TGCCTTGGATAAGAAGGAACAGAAGTCCAAGCATAGTTTACAGAGCCTTTGAAGATGTCACGACAGAGAGTTATAGTATCTTCCATGGCGAAATTGTTGAGCCATATGCT
GTCTGCCGGAGTCGACATTACCCCGCCGGGCTTCAAAGCCTTCGCTATTGATTTAAGCAAGTCTTCATTTGAAAGCTCTGTTGCATAAGCCCCTGATATCCATATTCAAT
TATATAGGCTTCAACTTCTCTTTGTATAGTG
Protein sequenceShow/hide protein sequence
MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSVFGENGHSSTY
TWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATLYSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQ
PKDLEIRHLPL