; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G003590 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G003590
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSpermidine synthase
Genome locationchr02:3061914..3065916
RNA-Seq ExpressionLsi02G003590
SyntenyLsi02G003590
Gene Ontology termsGO:0006596 - polyamine biosynthetic process (biological process)
GO:0004766 - spermidine synthase activity (molecular function)
InterPro domainsIPR001045 - Spermidine/spermine synthases
IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase
IPR030373 - Polyamine biosynthesis domain, conserved site
IPR030374 - Polyamine biosynthesis domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008446082.2 PREDICTED: spermidine synthase 1-like [Cucumis melo]5.1e-12985.29Show/hide
Query:  THGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKM---VYKKYFPDIAIGYKDPRVNAYVGDGV
        THGK+VILDGSLQL+EKDEFAYQEML HLPLCSIPNPKKVLLIGGGDGGILRE+SRHACVEQIDICDLDKM   VYKK+FPDIAIGYKDPRVN+Y+GDGV
Subjt:  THGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKM---VYKKYFPDIAIGYKDPRVNAYVGDGV

Query:  AFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPKPYISFV
        AFI SVPPATYDAIIIDAFQGMGAYATELSNED+LKSIAKALKPGGVMS PADSIWLNNFAMEDTITLCR+IFKGSVNYAWTSVPSY             
Subjt:  AFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPKPYISFV

Query:  SFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSKYA
                 G+IGFMLCSTDGPSVDFKRPVN LDP NFGVAKGPPKFYNSEIH+AAFSLPAFAKSAMGSKYA
Subjt:  SFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSKYA

XP_022137674.1 spermidine synthase 1-like [Momordica charantia]1.1e-11878.68Show/hide
Query:  THGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKM---VYKKYFPDIAIGYKDPRVNAYVGDGV
        THGK+VILDGSLQL+EKDEFAYQEML HLPLCSIPNPKKVLLIGGGDGGILRE+SRH+ VE IDICDLDKM   VYKK+FPDIA+GY+DPRVN  +GDG 
Subjt:  THGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKM---VYKKYFPDIAIGYKDPRVNAYVGDGV

Query:  AFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPKPYISFV
        AFI S+PP TYDAII+DAFQGMGAYATELS++D L+SIAKALKPGGVMSTPADS+WL NFAMEDTI LCR IFKGSVNYAWTSVPSYP            
Subjt:  AFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPKPYISFV

Query:  SFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSKYA
                 GAIGFMLC+TDGPSVDFK PVN LDP NFGVAK PP FYNSEIHTAAF LPAFAK AMGSKYA
Subjt:  SFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSKYA

XP_022923862.1 spermidine synthase 1-like [Cucurbita moschata]1.3e-11173.93Show/hide
Query:  FLKLSSPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKM---VYKKYFPDIAIGYKDPRVN
        F    S T+GKI ILDG LQL+EKDE +YQEML HLPLCSIPNP+KVLLIGGGDGGILREISRH  VEQIDIC+LD+M   VYK++FPDIAIGY DPRVN
Subjt:  FLKLSSPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKM---VYKKYFPDIAIGYKDPRVN

Query:  AYVGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQP
         ++GDGVAFI SVPP TYDAIIIDAF GMGAYATELS+ED LKSIAKALKPGGV+S  ADS+W+ NF MEDTIT CR+IFKGSVNYAWTSVPSYP     
Subjt:  AYVGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQP

Query:  KPYISFVSFPKFFTFIGAIGFMLCSTDGPS-VDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSKYA
                        G+IGF+LCST+GPS VDFK PVN LDP  FGVA GPPKFYNSEIHTAAF LPAFAKS MGS YA
Subjt:  KPYISFVSFPKFFTFIGAIGFMLCSTDGPS-VDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSKYA

XP_023519819.1 spermidine synthase 2-like [Cucurbita pepo subsp. pepo]2.0e-11274.29Show/hide
Query:  FLKLSSPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKM---VYKKYFPDIAIGYKDPRVN
        F    S T+GKI ILDG LQL+EKDE +YQEML HLPLCSIPNPKKVLLIGGGDGGILREISRH  VEQIDIC+LD+M   VYK++FPDIAIGY DPRV+
Subjt:  FLKLSSPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKM---VYKKYFPDIAIGYKDPRVN

Query:  AYVGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQP
         ++GDGVAFI SVPP TYDAIIIDAF+GMGAYATELS+ED LKSIAKALKPGGV+S  ADS+W+ NF MEDTIT CR+IFKGSVNYAWTSVPSYP     
Subjt:  AYVGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQP

Query:  KPYISFVSFPKFFTFIGAIGFMLCSTDGPS-VDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSKYA
                        GAIGF+LCST+GPS VDFK PVN LDP NFGVA GPPKFYNSEIHTAAF LP FAKS MGS YA
Subjt:  KPYISFVSFPKFFTFIGAIGFMLCSTDGPS-VDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSKYA

XP_038893662.1 spermidine synthase 2-like [Benincasa hispida]2.5e-12884.98Show/hide
Query:  SPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKM---VYKKYFPDIAIGYKDPRVNAYVGD
        SPTHGK+VILDGSLQL+EKDEFAYQEML HLPLCSIPNPKKVLLIGGGDGGILREISRHACVE IDICDLDKM   VYK+YFPDIAIGYKDPRVN  +GD
Subjt:  SPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKM---VYKKYFPDIAIGYKDPRVNAYVGD

Query:  GVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPKPYIS
        GVAFI SVPPATYDAIIIDAFQGMGAYATELSNEDLLKS+A ALKPGGVMSTPADSIW NNFAMEDTITLCRDIFKGSVNYAWTSVPSYP          
Subjt:  GVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPKPYIS

Query:  FVSFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSKY
                   G IGFMLCST GPSVDFK PVNLLDPGNFGVAKGPPKFYN EIHTAAF LPAFAKSAMGSKY
Subjt:  FVSFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSKY

TrEMBL top hitse value%identityAlignment
A0A1S3BF22 spermidine synthase 1-like2.5e-12985.29Show/hide
Query:  THGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKM---VYKKYFPDIAIGYKDPRVNAYVGDGV
        THGK+VILDGSLQL+EKDEFAYQEML HLPLCSIPNPKKVLLIGGGDGGILRE+SRHACVEQIDICDLDKM   VYKK+FPDIAIGYKDPRVN+Y+GDGV
Subjt:  THGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKM---VYKKYFPDIAIGYKDPRVNAYVGDGV

Query:  AFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPKPYISFV
        AFI SVPPATYDAIIIDAFQGMGAYATELSNED+LKSIAKALKPGGVMS PADSIWLNNFAMEDTITLCR+IFKGSVNYAWTSVPSY             
Subjt:  AFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPKPYISFV

Query:  SFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSKYA
                 G+IGFMLCSTDGPSVDFKRPVN LDP NFGVAKGPPKFYNSEIH+AAFSLPAFAKSAMGSKYA
Subjt:  SFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSKYA

A0A5D3BJ52 Spermidine synthase 1-like1.9e-10573.9Show/hide
Query:  THGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKM---VYKKYFPDIAIGYKDPRVNAYVGDGV
        THGK+VILDGSLQL+EKDEFAYQEML HLPLCSIPNPKKVLLIGGGDGGILRE+SRHACVEQIDICDLDKM   VYKK+FPDIAIGYKDPRVN+Y+GDGV
Subjt:  THGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKM---VYKKYFPDIAIGYKDPRVNAYVGDGV

Query:  AFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPKPYISFV
        AFI SVPPATYDAIIIDAFQGMGAYATELSNED+LKSIAKALKPGGVMS PADSIWLNNFAMEDTITLC                               
Subjt:  AFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPKPYISFV

Query:  SFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSKYA
                               +DFKRPVN LDP NFGVAKGPPKFYNSEIH+AAFSLPAFAKSAMGSKYA
Subjt:  SFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSKYA

A0A6J1C7X6 spermidine synthase 1-like5.2e-11978.68Show/hide
Query:  THGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKM---VYKKYFPDIAIGYKDPRVNAYVGDGV
        THGK+VILDGSLQL+EKDEFAYQEML HLPLCSIPNPKKVLLIGGGDGGILRE+SRH+ VE IDICDLDKM   VYKK+FPDIA+GY+DPRVN  +GDG 
Subjt:  THGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKM---VYKKYFPDIAIGYKDPRVNAYVGDGV

Query:  AFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPKPYISFV
        AFI S+PP TYDAII+DAFQGMGAYATELS++D L+SIAKALKPGGVMSTPADS+WL NFAMEDTI LCR IFKGSVNYAWTSVPSYP            
Subjt:  AFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPKPYISFV

Query:  SFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSKYA
                 GAIGFMLC+TDGPSVDFK PVN LDP NFGVAK PP FYNSEIHTAAF LPAFAK AMGSKYA
Subjt:  SFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSKYA

A0A6J1E7A6 spermidine synthase 1-like6.1e-11273.93Show/hide
Query:  FLKLSSPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKM---VYKKYFPDIAIGYKDPRVN
        F    S T+GKI ILDG LQL+EKDE +YQEML HLPLCSIPNP+KVLLIGGGDGGILREISRH  VEQIDIC+LD+M   VYK++FPDIAIGY DPRVN
Subjt:  FLKLSSPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKM---VYKKYFPDIAIGYKDPRVN

Query:  AYVGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQP
         ++GDGVAFI SVPP TYDAIIIDAF GMGAYATELS+ED LKSIAKALKPGGV+S  ADS+W+ NF MEDTIT CR+IFKGSVNYAWTSVPSYP     
Subjt:  AYVGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQP

Query:  KPYISFVSFPKFFTFIGAIGFMLCSTDGPS-VDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSKYA
                        G+IGF+LCST+GPS VDFK PVN LDP  FGVA GPPKFYNSEIHTAAF LPAFAKS MGS YA
Subjt:  KPYISFVSFPKFFTFIGAIGFMLCSTDGPS-VDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSKYA

A0A6J1KGF9 spermidine synthase 1-like5.2e-11173.21Show/hide
Query:  FLKLSSPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKM---VYKKYFPDIAIGYKDPRVN
        F    S T+GKI ILDG LQL+EKDE +YQEML HLPLCSIPNPKKVLLIGGGDGGILREISRHA VEQIDIC+LD+M   VYK++FPDIAIGY DPRVN
Subjt:  FLKLSSPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKM---VYKKYFPDIAIGYKDPRVN

Query:  AYVGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQP
         ++G+GVAFI SVPP TYD+IIIDAF+GMGAYATELS+E  LKSIAKALKPGGV+S  ADS+W+ NF MEDTIT CR+IFKGSVNYAWTSVPSYP     
Subjt:  AYVGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQP

Query:  KPYISFVSFPKFFTFIGAIGFMLCSTDGPS-VDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSKYA
                        G+IGF+LCST+GPS VDFK PVN LDP  FGVA GPPKFYNSEIHTAAF LP FAKS MGS YA
Subjt:  KPYISFVSFPKFFTFIGAIGFMLCSTDGPS-VDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSKYA

SwissProt top hitse value%identityAlignment
O48658 Spermidine synthase 17.8e-8856.99Show/hide
Query:  SPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKMVY---KKYFPDIAIGYKDPRVNAYVGD
        S T+GK+++LDG +QL+E+DE AYQEM+ HLPLCSIPNPKKVL+IGGGDGG+LRE+SRH+ VEQIDIC++DKMV    K++FPD+A+GY+DPRVN ++GD
Subjt:  SPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKMVY---KKYFPDIAIGYKDPRVNAYVGD

Query:  GVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPKPYIS
        GVAF+ +VP  TYDA+I+D+   +G  A EL  +   +SIA+AL+PGGV+ST A+SIWL+   +E+ +  CR IFKGSVNYAWT+VP+YP          
Subjt:  GVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPKPYIS

Query:  FVSFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSK
                   G IGFMLCST+GP+VDFK P+N +D  +      P KFYNSEIH A+F LP+FAK  + SK
Subjt:  FVSFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSK

O48660 Spermidine synthase2.3e-8756.78Show/hide
Query:  SPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKMVY---KKYFPDIAIGYKDPRVNAYVGD
        S T+GK+++LDG +QL+E+DE AYQEM+AHLPLCSIPNPKKVL+IGGGDGG+LRE+SRH+ VEQIDIC++DKMV    K++FPD+A+GY+DPRVN ++GD
Subjt:  SPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKMVY---KKYFPDIAIGYKDPRVNAYVGD

Query:  GVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPKPYIS
        GVAF+ +V   TYDA+I+D+   +G  A EL  +   +SIA+AL+PGGV+ST A+SIWL+   +E+ +  CR IFKGSVNYAWT+VP+YP          
Subjt:  GVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPKPYIS

Query:  FVSFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLL-DPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSK
                   G IGFMLCST+GP+VDFK P+N + D  +     GP KFYNSE+H A+F LP+FAK  + SK
Subjt:  FVSFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLL-DPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSK

Q96557 Spermidine synthase 23.2e-8956.99Show/hide
Query:  SPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKMVY---KKYFPDIAIGYKDPRVNAYVGD
        S T+GK+++LDG +QL+E+DE AYQEM+ HLPLCSIPNPKKVL+IGGGDGG+LRE+SRH+ VEQIDIC++DKMV    K++FPD+A+GY+DPRVN ++GD
Subjt:  SPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKMVY---KKYFPDIAIGYKDPRVNAYVGD

Query:  GVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPKPYIS
        GVAF+ +VP  TYDA+I+D+   +G  A EL  +   ++IA+AL+PGGV+ST A+SIWL+   +E+ +  CR+IFKGSVNYAWT+VP+YP          
Subjt:  GVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPKPYIS

Query:  FVSFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSK
                   G IGFMLCST+GP+VDFK P+N +D  + G   GP KFYNSEIH A+F LP+FAK  + +K
Subjt:  FVSFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSK

Q9ZS45 Spermidine synthase5.9e-8856.52Show/hide
Query:  LKLSSPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKMVY---KKYFPDIAIGYKDPRVNA
        L   S T+GK+++LDG +QL+E+DE AYQEM+ HLPLCSIPNPKKVL+IGGGDGG+LRE+SRH+ VEQIDIC++DKMV    K++FPD+A+GY+DPRVN 
Subjt:  LKLSSPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKMVY---KKYFPDIAIGYKDPRVNA

Query:  YVGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPK
        ++GDGVAF+ +VP  TYDA+I+D+   +G  A EL  +   +SIAKAL+PGGV+ST A+SIWL+   +E+ +  CR IFKGSVNYAWT+VP+YP      
Subjt:  YVGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPK

Query:  PYISFVSFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSK
                       G IGFMLCST+GP+VDFK P+N +D  +   +  P KFYNSEIH A+F LP+FAK  + +K
Subjt:  PYISFVSFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSK

Q9ZTR1 Spermidine synthase 15.0e-8756.99Show/hide
Query:  SPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKMVY---KKYFPDIAIGYKDPRVNAYVGD
        S T+GK++ILDG +QL+E+DE AYQEM+ HLPLCSIPNPKKVL+IGGGDGG+LRE++RH+ VE+IDIC++DKMV    K+YFPDIA+G+ DPRV   +GD
Subjt:  SPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKMVY---KKYFPDIAIGYKDPRVNAYVGD

Query:  GVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPKPYIS
        GVAF+ + P  TYDA+I+D+   +G  A EL  +   +S+A+AL+PGGV+ T A+SIWL+   +ED +  CR +FKGSVNYAWT+VP+YP          
Subjt:  GVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPKPYIS

Query:  FVSFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSK
                   G IGFMLCST+GPSVDFK PVN +D  +   A  P KFYN EIH+AAF LP+FAK A+ SK
Subjt:  FVSFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSK

Arabidopsis top hitse value%identityAlignment
AT1G23820.1 spermidine synthase 14.0e-8755.51Show/hide
Query:  SPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKMVY---KKYFPDIAIGYKDPRVNAYVGD
        S T+GK+++LDG +QL+E+DE AYQEM+ HLPLCSIPNPKKVL+IGGGDGG+LRE++RHA +EQID+C++DKMV    K++FPD+AIGY+DPRVN  +GD
Subjt:  SPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKMVY---KKYFPDIAIGYKDPRVNAYVGD

Query:  GVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPKPYIS
        GVAF+ +    +YDA+I+D+   +G  A EL  +   +S+A+AL+PGGV+ T A+S+WL+   +ED ++ CR+IFKGSVNYAWTSVP+YP          
Subjt:  GVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPKPYIS

Query:  FVSFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSK
                   G IGFMLCST+GP VDFK P+N +D  +   + GP KFYN+EIH+AAF LP+FAK  + SK
Subjt:  FVSFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSK

AT1G70310.1 spermidine synthase 22.2e-8554.58Show/hide
Query:  SPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKMVY---KKYFPDIAIGYKDPRVNAYVGD
        S T+GK+++LDG +QL+E+DE AYQEM+ HLPLCSI NPKKVL+IGGGDGG+LRE++RH+ VEQIDIC++DKMV    K+YFP++A+GY+DPRVN  +GD
Subjt:  SPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKMVY---KKYFPDIAIGYKDPRVNAYVGD

Query:  GVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPKPYIS
        GVAF+ +    TYDA+I+D+   +G  A EL  +   +S+ +AL+PGGV+ T A+S+WL+   +ED ++ CRDIFKGSVNYAWTSVP+YP          
Subjt:  GVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPKPYIS

Query:  FVSFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGV-AKGPPKFYNSEIHTAAFSLPAFAKSAMGSK
                   G IGFMLCS++GP VDFK+PV+L+D     + +  P K+YN+EIH+AAF LP+FAK  + SK
Subjt:  FVSFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGV-AKGPPKFYNSEIHTAAFSLPAFAKSAMGSK

AT5G53120.1 spermidine synthase 32.9e-7449.1Show/hide
Query:  LKLSSPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKMVY---KKYFPDIAIGYKDPRVNA
        L   S T+GK+++LDG +QL+EKDE AYQEM+AHLPLCSI +PK VL++GGGDGG+LREISRH+ VE IDIC++DKMV    KK+FP++A+G+ DPRV  
Subjt:  LKLSSPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKMVY---KKYFPDIAIGYKDPRVNA

Query:  YVGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPK
        ++GD   F+   P   YDAII+D+   +G  A  L  +   +++A+ALKPGGV+   A+S+WL+   +ED I++CR  FK SV+YAW+SVP+YP      
Subjt:  YVGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPK

Query:  PYISFVSFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVA-KGPPKFYNSEIHTAAFSLPAFAKSAMGSKYA
                       G IGF+LCST+GP+VDFK P+N ++  +  +  K   KFYNS++H AAF+LP F +  + S  A
Subjt:  PYISFVSFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVA-KGPPKFYNSEIHTAAFSLPAFAKSAMGSKYA

AT5G53120.2 spermidine synthase 32.9e-7449.1Show/hide
Query:  LKLSSPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKMVY---KKYFPDIAIGYKDPRVNA
        L   S T+GK+++LDG +QL+EKDE AYQEM+AHLPLCSI +PK VL++GGGDGG+LREISRH+ VE IDIC++DKMV    KK+FP++A+G+ DPRV  
Subjt:  LKLSSPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKMVY---KKYFPDIAIGYKDPRVNA

Query:  YVGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPK
        ++GD   F+   P   YDAII+D+   +G  A  L  +   +++A+ALKPGGV+   A+S+WL+   +ED I++CR  FK SV+YAW+SVP+YP      
Subjt:  YVGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPK

Query:  PYISFVSFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVA-KGPPKFYNSEIHTAAFSLPAFAKSAMGSKYA
                       G IGF+LCST+GP+VDFK P+N ++  +  +  K   KFYNS++H AAF+LP F +  + S  A
Subjt:  PYISFVSFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVA-KGPPKFYNSEIHTAAFSLPAFAKSAMGSKYA

AT5G53120.3 spermidine synthase 32.9e-7449.1Show/hide
Query:  LKLSSPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKMVY---KKYFPDIAIGYKDPRVNA
        L   S T+GK+++LDG +QL+EKDE AYQEM+AHLPLCSI +PK VL++GGGDGG+LREISRH+ VE IDIC++DKMV    KK+FP++A+G+ DPRV  
Subjt:  LKLSSPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKMVY---KKYFPDIAIGYKDPRVNA

Query:  YVGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPK
        ++GD   F+   P   YDAII+D+   +G  A  L  +   +++A+ALKPGGV+   A+S+WL+   +ED I++CR  FK SV+YAW+SVP+YP      
Subjt:  YVGDGVAFINSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPK

Query:  PYISFVSFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVA-KGPPKFYNSEIHTAAFSLPAFAKSAMGSKYA
                       G IGF+LCST+GP+VDFK P+N ++  +  +  K   KFYNS++H AAF+LP F +  + S  A
Subjt:  PYISFVSFPKFFTFIGAIGFMLCSTDGPSVDFKRPVNLLDPGNFGVA-KGPPKFYNSEIHTAAFSLPAFAKSAMGSKYA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTTCCTTAAATTAAGTTCACCAACACATGGGAAGATTGTAATATTGGATGGGTCCCTTCAGCTATCTGAGAAGGATGAGTTTGCTTATCAAGAAATGCTCGCTCA
TCTCCCACTTTGTTCTATTCCCAATCCCAAAAAGGTTTTGCTCATTGGAGGTGGGGATGGAGGGATTCTTCGAGAAATATCTCGACATGCTTGTGTGGAGCAAATCGACA
TTTGTGATCTCGACAAAATGGTTTACAAGAAGTATTTCCCAGACATTGCTATCGGGTACAAGGATCCTCGTGTGAATGCATACGTAGGCGACGGTGTGGCGTTCATCAAC
TCTGTTCCTCCAGCCACCTATGATGCTATTATAATTGATGCATTTCAGGGCATGGGGGCTTATGCAACAGAGCTTTCAAATGAAGACTTGCTTAAATCAATAGCGAAGGC
TTTGAAGCCCGGCGGGGTAATGTCGACTCCGGCAGACAGCATATGGCTCAACAATTTCGCCATGGAAGATACTATAACTCTCTGTCGTGACATCTTCAAAGGCTCTGTAA
ACTATGCTTGGACTTCTGTTCCTTCTTATCCAAGGCAAACCCAACCAAAACCATATATTAGCTTTGTTTCATTTCCAAAATTCTTTACTTTTATTGGGGCGATCGGCTTC
ATGCTCTGTTCAACTGACGGTCCATCAGTCGACTTCAAACGCCCCGTGAACCTGTTGGATCCAGGAAATTTTGGTGTTGCAAAAGGACCCCCCAAGTTCTACAACTCAGA
GATCCATACTGCTGCTTTTTCTCTTCCTGCTTTCGCAAAGTCAGCGATGGGTTCCAAATATGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTTTCCTTAAATTAAGTTCACCAACACATGGGAAGATTGTAATATTGGATGGGTCCCTTCAGCTATCTGAGAAGGATGAGTTTGCTTATCAAGAAATGCTCGCTCA
TCTCCCACTTTGTTCTATTCCCAATCCCAAAAAGGTTTTGCTCATTGGAGGTGGGGATGGAGGGATTCTTCGAGAAATATCTCGACATGCTTGTGTGGAGCAAATCGACA
TTTGTGATCTCGACAAAATGGTTTACAAGAAGTATTTCCCAGACATTGCTATCGGGTACAAGGATCCTCGTGTGAATGCATACGTAGGCGACGGTGTGGCGTTCATCAAC
TCTGTTCCTCCAGCCACCTATGATGCTATTATAATTGATGCATTTCAGGGCATGGGGGCTTATGCAACAGAGCTTTCAAATGAAGACTTGCTTAAATCAATAGCGAAGGC
TTTGAAGCCCGGCGGGGTAATGTCGACTCCGGCAGACAGCATATGGCTCAACAATTTCGCCATGGAAGATACTATAACTCTCTGTCGTGACATCTTCAAAGGCTCTGTAA
ACTATGCTTGGACTTCTGTTCCTTCTTATCCAAGGCAAACCCAACCAAAACCATATATTAGCTTTGTTTCATTTCCAAAATTCTTTACTTTTATTGGGGCGATCGGCTTC
ATGCTCTGTTCAACTGACGGTCCATCAGTCGACTTCAAACGCCCCGTGAACCTGTTGGATCCAGGAAATTTTGGTGTTGCAAAAGGACCCCCCAAGTTCTACAACTCAGA
GATCCATACTGCTGCTTTTTCTCTTCCTGCTTTCGCAAAGTCAGCGATGGGTTCCAAATATGCATGA
Protein sequenceShow/hide protein sequence
MIFLKLSSPTHGKIVILDGSLQLSEKDEFAYQEMLAHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEQIDICDLDKMVYKKYFPDIAIGYKDPRVNAYVGDGVAFIN
SVPPATYDAIIIDAFQGMGAYATELSNEDLLKSIAKALKPGGVMSTPADSIWLNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPRQTQPKPYISFVSFPKFFTFIGAIGF
MLCSTDGPSVDFKRPVNLLDPGNFGVAKGPPKFYNSEIHTAAFSLPAFAKSAMGSKYA