; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G003640 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G003640
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionBHLH domain-containing protein
Genome locationchr02:3105894..3106817
RNA-Seq ExpressionLsi02G003640
SyntenyLsi02G003640
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:2000112 - regulation of cellular macromolecule biosynthetic process (biological process)
GO:0090575 - RNA polymerase II transcription factor complex (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR015660 - Achaete-scute transcription factor-related
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008438283.1 PREDICTED: uncharacterized protein LOC103483440 [Cucumis melo]2.9e-7077.08Show/hide
Query:  GETSSSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNH-SHNHDYQANIDRVSATRML
        G +SSS++LDRKT+EKNRR HMKSLCS LFNLVPPSHFKI KEL+SQQNQI +VIAYINELKERVENLEKR+QAL+L+ H SH HD QAN          
Subjt:  GETSSSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNH-SHNHDYQANIDRVSATRML

Query:  ANNDDFTLPVVDLRDLGNDIVHIMLISSLNRSFMLHQIISVVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVYQN
         NN+D TLP++++ DLGNDIVHIMLISS+NRSFMLHQIISV+EEEGGQVVNA LST+GNKVFHSLHIEAKISR+GIETSRV++RL+NLVYQN
Subjt:  ANNDDFTLPVVDLRDLGNDIVHIMLISSLNRSFMLHQIISVVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVYQN

XP_022954432.1 transcription factor bHLH168-like [Cucurbita moschata]2.2e-5465.59Show/hide
Query:  SSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNHSHNHDYQANIDRVSATRMLANNDD
        +S KLDRK VEKNRRIHMKSLCSKLFNLVP SH+KISK+LLSQQ QISYVIAYI ELKERVE+LEKR++ALQL+ HS                 L  + D
Subjt:  SSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNHSHNHDYQANIDRVSATRMLANNDD

Query:  FTLPVVDLRDLGNDIVHIMLISSLNRSFMLHQIISVVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVYQ
         T P+V++R+L + IVH+ LISS++R+ ML++II VVEEEGG+VV+AS ST+G+KVFHSLHIEAKISRVGIETSRV++RL +L+ +
Subjt:  FTLPVVDLRDLGNDIVHIMLISSLNRSFMLHQIISVVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVYQ

XP_022994121.1 transcription factor bHLH168-like [Cucurbita maxima]4.5e-5564.52Show/hide
Query:  SSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNHSHNHDYQANIDRVSATRMLANNDD
        +S KLDRKTVEKNRRIHMKSLCSKLF+LVP SH+KISK+LLSQQ QISYVIAYINELKERVE+LEKR++ALQL+ HS                 L+ ++D
Subjt:  SSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNHSHNHDYQANIDRVSATRMLANNDD

Query:  FTLPVVDLRDLGNDIVHIMLISSLNRSFMLHQIISVVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVYQ
         T P+V++++L + IVH+ LISS++R+ ML++II V+EEEGG+VV+AS ST+G+K+FHSLHIEAKISRVGIETSR+++RL NL+ +
Subjt:  FTLPVVDLRDLGNDIVHIMLISSLNRSFMLHQIISVVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVYQ

XP_023542199.1 transcription factor bHLH168-like [Cucurbita pepo subsp. pepo]7.7e-5565.59Show/hide
Query:  SSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNHSHNHDYQANIDRVSATRMLANNDD
        +S KLDRKTVEKNRRIHMKSLCSKLFNLVP SH+KISK+LLSQQ QISYVIAYINELKERVE+LEK+++ALQL+ HS                 L  + D
Subjt:  SSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNHSHNHDYQANIDRVSATRMLANNDD

Query:  FTLPVVDLRDLGNDIVHIMLISSLNRSFMLHQIISVVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVYQ
         T P+V++R+L + IVH+ LISS++R+ ML++II VVEEEGG+VV+AS ST+G+KVFHSLHIEAKI RVGIETSRV++RL +L+ +
Subjt:  FTLPVVDLRDLGNDIVHIMLISSLNRSFMLHQIISVVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVYQ

XP_031737508.1 transcription factor bHLH162-like [Cucumis sativus]7.7e-6361.7Show/hide
Query:  NGETSSSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISK-------------------------------------------ELLSQQNQISYVIA
        +GETSSSSKLDRKT+EKNRRIHMKSLCS LFNL+PPSHFKI K                                           EL+SQQNQI YVI 
Subjt:  NGETSSSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISK-------------------------------------------ELLSQQNQISYVIA

Query:  YINELKERVENLEKRRQALQLRNH-SHNHDYQANIDRVSATRMLANNDDFTLPVVDLRDLGNDIVHIMLISSLNRSFMLHQIISVVEEEGGQVVNASLST
        YINELKERV+NLEKR+QALQL+ H SH H+   NI            +D T P++++ DLGNDI+HI+LISSLNRSF LHQIISV+EEEGGQVVNASLST
Subjt:  YINELKERVENLEKRRQALQLRNH-SHNHDYQANIDRVSATRMLANNDDFTLPVVDLRDLGNDIVHIMLISSLNRSFMLHQIISVVEEEGGQVVNASLST

Query:  VGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVYQ
        +GNKVFHSLHIEAKISR+GIETSRV++RL+NLVYQ
Subjt:  VGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVYQ

TrEMBL top hitse value%identityAlignment
A0A1S3AW43 uncharacterized protein LOC1034834401.4e-7077.08Show/hide
Query:  GETSSSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNH-SHNHDYQANIDRVSATRML
        G +SSS++LDRKT+EKNRR HMKSLCS LFNLVPPSHFKI KEL+SQQNQI +VIAYINELKERVENLEKR+QAL+L+ H SH HD QAN          
Subjt:  GETSSSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNH-SHNHDYQANIDRVSATRML

Query:  ANNDDFTLPVVDLRDLGNDIVHIMLISSLNRSFMLHQIISVVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVYQN
         NN+D TLP++++ DLGNDIVHIMLISS+NRSFMLHQIISV+EEEGGQVVNA LST+GNKVFHSLHIEAKISR+GIETSRV++RL+NLVYQN
Subjt:  ANNDDFTLPVVDLRDLGNDIVHIMLISSLNRSFMLHQIISVVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVYQN

A0A6J1C669 transcription factor bHLH162-like1.3e-4463.19Show/hide
Query:  AVNGETSSSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNHSHNHDYQANIDRVSATR
        A  G   +S KLDRKT+EKNRR+HMKSLCSKL +L+PPSHFKISK+LLSQQNQISYVIAYINELKERVE LEK+++AL+  +H H+H          A+R
Subjt:  AVNGETSSSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNHSHNHDYQANIDRVSATR

Query:  MLANNDDFTLPVVDLRDLGNDIVHIMLISSLNRSFMLHQIISVVEEEGGQVVNASLSTVGNKV
                TLPVV+LRDLG+ ++ +MLIS LNR+F+L Q+I++VEEEGGQVVNAS ST+G K+
Subjt:  MLANNDDFTLPVVDLRDLGNDIVHIMLISSLNRSFMLHQIISVVEEEGGQVVNASLSTVGNKV

A0A6J1GQZ4 transcription factor bHLH168-like1.1e-5465.59Show/hide
Query:  SSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNHSHNHDYQANIDRVSATRMLANNDD
        +S KLDRK VEKNRRIHMKSLCSKLFNLVP SH+KISK+LLSQQ QISYVIAYI ELKERVE+LEKR++ALQL+ HS                 L  + D
Subjt:  SSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNHSHNHDYQANIDRVSATRMLANNDD

Query:  FTLPVVDLRDLGNDIVHIMLISSLNRSFMLHQIISVVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVYQ
         T P+V++R+L + IVH+ LISS++R+ ML++II VVEEEGG+VV+AS ST+G+KVFHSLHIEAKISRVGIETSRV++RL +L+ +
Subjt:  FTLPVVDLRDLGNDIVHIMLISSLNRSFMLHQIISVVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVYQ

A0A6J1JY79 transcription factor bHLH168-like2.2e-5564.52Show/hide
Query:  SSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNHSHNHDYQANIDRVSATRMLANNDD
        +S KLDRKTVEKNRRIHMKSLCSKLF+LVP SH+KISK+LLSQQ QISYVIAYINELKERVE+LEKR++ALQL+ HS                 L+ ++D
Subjt:  SSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNHSHNHDYQANIDRVSATRMLANNDD

Query:  FTLPVVDLRDLGNDIVHIMLISSLNRSFMLHQIISVVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVYQ
         T P+V++++L + IVH+ LISS++R+ ML++II V+EEEGG+VV+AS ST+G+K+FHSLHIEAKISRVGIETSR+++RL NL+ +
Subjt:  FTLPVVDLRDLGNDIVHIMLISSLNRSFMLHQIISVVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVYQ

A0A6P3Z232 transcription factor bHLH162-like6.2e-4251.58Show/hide
Query:  NGETSSSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNHSHNHDYQANIDRVSATRML
        N  +S S KLDRKTVE+NRRIHMK LC KL +L+PP HFK SK++LSQQ+Q++    YI +L E++E ++ +++A      + N ++  NID +      
Subjt:  NGETSSSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNHSHNHDYQANIDRVSATRML

Query:  ANNDDFTLPVVDLRDLGNDIVHIMLISSLNRSFMLHQIISVVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVY
         N     LPV++L+DLG+ I  ++LIS L ++FML+++ISV+EEEG +VV+AS STVG+KVFHS+H + KISRVG+ETSRV QRL +L+Y
Subjt:  ANNDDFTLPVVDLRDLGNDIVHIMLISSLNRSFMLHQIISVVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVY

SwissProt top hitse value%identityAlignment
A2WZ60 Protein IRON-RELATED TRANSCRIPTION FACTOR 23.4e-0525.51Show/hide
Query:  NGETSSSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNHSHNHDYQANIDRVSATRML
        +G + S  KL     E++RR  +  L S L  L+P +      + LS    +S V+ YI EL+++VENLE++++ L   + ++          V  ++++
Subjt:  NGETSSSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNHSHNHDYQANIDRVSATRML

Query:  ANNDDFTLPVVDLRDLGNDIVHIMLISSLNRSFM-LHQIISVVEEEGGQVVNASLST-VGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVYQNYK
        +      +    + D+   +V + L+S++  S + L + I V+E EG   +++S S+  GN+ F+S+H++     +  E     +RL  +V    K
Subjt:  ANNDDFTLPVVDLRDLGNDIVHIMLISSLNRSFM-LHQIISVVEEEGGQVVNASLST-VGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVYQNYK

F4I4E1 Transcription factor bHLH1672.4e-1129.84Show/hide
Query:  GETSSSSKLDRKTV-EKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNHSHNHDYQANIDRVSATRML
        GE +SSS  +++ + EK+RR+ MK L S L + V P+        L   + I    +Y+ +LKE V  L+++++ L L+    N                
Subjt:  GETSSSSKLDRKTV-EKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNHSHNHDYQANIDRVSATRML

Query:  ANNDDFTLPVVDLRDLGNDIVHIMLISSLN-RSFMLHQIISVVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVY
             F LP + +R   +  + + LI  LN +  MLH+++S+ EEEG QV++A+L  + ++  +++  +A ISR+GI+ SR+++R+  ++Y
Subjt:  ANNDDFTLPVVDLRDLGNDIVHIMLISSLN-RSFMLHQIISVVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVY

F4JIJ7 Transcription factor bHLH1622.3e-1433.67Show/hide
Query:  NGETSSSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQ------ALQLRNHSHNHDYQANIDRV
        +  T  S  +DRKTVEKNRR+ MKSL S+L +L+P      S E L+  +Q+     YI +L+  VE   +R++       L+  N   +    +++D V
Subjt:  NGETSSSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQ------ALQLRNHSHNHDYQANIDRV

Query:  SATRMLANNDDFTLPVVDLRDLGNDIVHIMLISSLNRSFMLHQIISVVEEE-GGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLV
        S  R         LP +++++ G+ I HI L++SL   FM  +II V+ EE G ++ +A  S V + VFH+LH + +    G   S++ +RL  +V
Subjt:  SATRMLANNDDFTLPVVDLRDLGNDIVHIMLISSLNRSFMLHQIISVVEEE-GGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLV

Q0JFZ0 Protein IRON-RELATED TRANSCRIPTION FACTOR 22.6e-0526.4Show/hide
Query:  NGETSSSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPS-HFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNHSHNHDYQANIDRVSATRM
        +G + S  KL     E++RR  +  L S L  L+P + H K     LS    +S V+ YI EL+++VENLE++++ L   + ++          V  +++
Subjt:  NGETSSSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPS-HFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNHSHNHDYQANIDRVSATRM

Query:  LANNDDFTLPVVDLRDLGNDIVHIMLISSLNRSFM-LHQIISVVEEEGGQVVNASLST-VGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVYQNYK
        ++      +    + D+   +V + L+S++  S + L + I V+E EG   +++S S+  GN+ F+S+H++     +  E     +RL  +V    K
Subjt:  LANNDDFTLPVVDLRDLGNDIVHIMLISSLNRSFM-LHQIISVVEEEGGQVVNASLST-VGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVYQNYK

Q9XIJ1 Transcription factor bHLH1682.9e-1231.09Show/hide
Query:  GETSSSSKLDRKTV-EKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENL-EKRRQAL--QLRNHSHNHDYQANIDRVSAT
        GE S+SS  +++ + EK RR+ MK L S L + V P+      +L+ Q       ++Y+ +LKE+V  L E +R+ L  +++N S               
Subjt:  GETSSSSKLDRKTV-EKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENL-EKRRQAL--QLRNHSHNHDYQANIDRVSAT

Query:  RMLANNDDFTLPVVDLRDLGNDIVHIMLISSLN-RSFMLHQIISVVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLV
                  LP + +R L + I+ + L+  LN +  MLH+++SV EEEG QV++A+L  + ++ F+++  +A I R+GI+ SR+++RL +++
Subjt:  RMLANNDDFTLPVVDLRDLGNDIVHIMLISSLN-RSFMLHQIISVVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLV

Arabidopsis top hitse value%identityAlignment
AT1G10585.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.7e-1229.84Show/hide
Query:  GETSSSSKLDRKTV-EKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNHSHNHDYQANIDRVSATRML
        GE +SSS  +++ + EK+RR+ MK L S L + V P+        L   + I    +Y+ +LKE V  L+++++ L L+    N                
Subjt:  GETSSSSKLDRKTV-EKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNHSHNHDYQANIDRVSATRML

Query:  ANNDDFTLPVVDLRDLGNDIVHIMLISSLN-RSFMLHQIISVVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVY
             F LP + +R   +  + + LI  LN +  MLH+++S+ EEEG QV++A+L  + ++  +++  +A ISR+GI+ SR+++R+  ++Y
Subjt:  ANNDDFTLPVVDLRDLGNDIVHIMLISSLN-RSFMLHQIISVVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVY

AT1G10586.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.0e-1331.09Show/hide
Query:  GETSSSSKLDRKTV-EKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENL-EKRRQAL--QLRNHSHNHDYQANIDRVSAT
        GE S+SS  +++ + EK RR+ MK L S L + V P+      +L+ Q       ++Y+ +LKE+V  L E +R+ L  +++N S               
Subjt:  GETSSSSKLDRKTV-EKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENL-EKRRQAL--QLRNHSHNHDYQANIDRVSAT

Query:  RMLANNDDFTLPVVDLRDLGNDIVHIMLISSLN-RSFMLHQIISVVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLV
                  LP + +R L + I+ + L+  LN +  MLH+++SV EEEG QV++A+L  + ++ F+++  +A I R+GI+ SR+++RL +++
Subjt:  RMLANNDDFTLPVVDLRDLGNDIVHIMLISSLN-RSFMLHQIISVVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLV

AT1G10586.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.7e-1030.2Show/hide
Query:  LLSQQNQISYVIAYINELKERVENL-EKRRQAL--QLRNHSHNHDYQANIDRVSATRMLANNDDFTLPVVDLRDLGNDIVHIMLISSLN-RSFMLHQIIS
        LL     I   ++Y+ +LKE+V  L E +R+ L  +++N S                         LP + +R L + I+ + L+  LN +  MLH+++S
Subjt:  LLSQQNQISYVIAYINELKERVENL-EKRRQAL--QLRNHSHNHDYQANIDRVSATRMLANNDDFTLPVVDLRDLGNDIVHIMLISSLN-RSFMLHQIIS

Query:  VVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLV
        V EEEG QV++A+L  + ++ F+++  +A I R+GI+ SR+++RL +++
Subjt:  VVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLV

AT4G20970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.7e-1533.67Show/hide
Query:  NGETSSSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQ------ALQLRNHSHNHDYQANIDRV
        +  T  S  +DRKTVEKNRR+ MKSL S+L +L+P      S E L+  +Q+     YI +L+  VE   +R++       L+  N   +    +++D V
Subjt:  NGETSSSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQ------ALQLRNHSHNHDYQANIDRV

Query:  SATRMLANNDDFTLPVVDLRDLGNDIVHIMLISSLNRSFMLHQIISVVEEE-GGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLV
        S  R         LP +++++ G+ I HI L++SL   FM  +II V+ EE G ++ +A  S V + VFH+LH + +    G   S++ +RL  +V
Subjt:  SATRMLANNDDFTLPVVDLRDLGNDIVHIMLISSLNRSFMLHQIISVVEEE-GGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTGTCAATGGTGAAACTTCTTCTTCTTCAAAACTAGATCGCAAAACTGTCGAAAAAAATAGAAGAATTCATATGAAATCTCTCTGTTCTAAGCTTTTTAATCTTGTTCC
TCCCTCCCATTTCAAAATCTCTAAGGAGTTATTATCGCAACAAAATCAAATCTCTTATGTAATTGCTTACATAAATGAATTGAAAGAAAGAGTGGAGAATTTGGAGAAAA
GGAGACAAGCTTTACAATTACGTAATCATTCTCATAATCATGATTATCAAGCTAATATCGACAGGGTTAGTGCAACCAGGATGTTAGCTAATAATGACGATTTTACATTG
CCTGTGGTCGATTTAAGAGATTTAGGCAATGACATTGTTCACATAATGCTAATTAGTAGTCTCAATAGAAGCTTCATGCTCCACCAAATTATTAGTGTCGTCGAAGAGGA
AGGCGGCCAAGTCGTCAATGCTAGCTTATCAACGGTTGGTAACAAGGTCTTTCACTCCCTTCACATTGAAGCAAAAATTTCGAGAGTTGGAATAGAGACTTCGAGAGTAC
AACAAAGATTGTTGAATTTGGTATACCAAAATTACAAATAA
mRNA sequenceShow/hide mRNA sequence
GCTGTCAATGGTGAAACTTCTTCTTCTTCAAAACTAGATCGCAAAACTGTCGAAAAAAATAGAAGAATTCATATGAAATCTCTCTGTTCTAAGCTTTTTAATCTTGTTCC
TCCCTCCCATTTCAAAATCTCTAAGGAGTTATTATCGCAACAAAATCAAATCTCTTATGTAATTGCTTACATAAATGAATTGAAAGAAAGAGTGGAGAATTTGGAGAAAA
GGAGACAAGCTTTACAATTACGTAATCATTCTCATAATCATGATTATCAAGCTAATATCGACAGGGTTAGTGCAACCAGGATGTTAGCTAATAATGACGATTTTACATTG
CCTGTGGTCGATTTAAGAGATTTAGGCAATGACATTGTTCACATAATGCTAATTAGTAGTCTCAATAGAAGCTTCATGCTCCACCAAATTATTAGTGTCGTCGAAGAGGA
AGGCGGCCAAGTCGTCAATGCTAGCTTATCAACGGTTGGTAACAAGGTCTTTCACTCCCTTCACATTGAAGCAAAAATTTCGAGAGTTGGAATAGAGACTTCGAGAGTAC
AACAAAGATTGTTGAATTTGGTATACCAAAATTACAAATAA
Protein sequenceShow/hide protein sequence
AVNGETSSSSKLDRKTVEKNRRIHMKSLCSKLFNLVPPSHFKISKELLSQQNQISYVIAYINELKERVENLEKRRQALQLRNHSHNHDYQANIDRVSATRMLANNDDFTL
PVVDLRDLGNDIVHIMLISSLNRSFMLHQIISVVEEEGGQVVNASLSTVGNKVFHSLHIEAKISRVGIETSRVQQRLLNLVYQNYK