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Lsi02G003930 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G003930
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCytosolic endo-beta-N-acetylglucosaminidase
Genome locationchr02:3347735..3351349
RNA-Seq ExpressionLsi02G003930
SyntenyLsi02G003930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG4921907.1 hypothetical protein JHK86_050720 [Glycine max]7.5e-0950.57Show/hide
Query:  AIRSVQAMHSRSTTVTRDA-DSCSEFLLPFSSEHSLP-KQRSGLPERTLGGSFWKKGVTGTRPEKLLSEMLSTTRFCITAMVWRSPL
        AI S   + SR+T  TR     CS+F LP    HSLP K  SG P  TL GSF K  ++GTRP  LL EM STTRFC  A  W  P+
Subjt:  AIRSVQAMHSRSTTVTRDA-DSCSEFLLPFSSEHSLP-KQRSGLPERTLGGSFWKKGVTGTRPEKLLSEMLSTTRFCITAMVWRSPL

KAG4925007.1 hypothetical protein JHK87_050547 [Glycine soja]9.8e-0950.57Show/hide
Query:  AIRSVQAMHSRSTTVTRDA-DSCSEFLLPFSSEHSLP-KQRSGLPERTLGGSFWKKGVTGTRPEKLLSEMLSTTRFCITAMVWRSPL
        AI S   + SR+T  TR     CS+F LP    HSLP K  SG P  TL GSF K  ++GTRP  LL EM STTRFC  A  W  P+
Subjt:  AIRSVQAMHSRSTTVTRDA-DSCSEFLLPFSSEHSLP-KQRSGLPERTLGGSFWKKGVTGTRPEKLLSEMLSTTRFCITAMVWRSPL

KAG4936646.1 hypothetical protein JHK85_051565 [Glycine max]4.9e-0849.43Show/hide
Query:  AIRSVQAMHSRSTTVTRDA-DSCSEFLLPFSSEHSLP-KQRSGLPERTLGGSFWKKGVTGTRPEKLLSEMLSTTRFCITAMVWRSPL
        AI S   + SR+T  TR     CS+F LP    HSLP K  SG P  TL G F K  ++GTRP  LL EM STTRFC  A  W  P+
Subjt:  AIRSVQAMHSRSTTVTRDA-DSCSEFLLPFSSEHSLP-KQRSGLPERTLGGSFWKKGVTGTRPEKLLSEMLSTTRFCITAMVWRSPL

KHN14001.1 Cytosolic endo-beta-N-acetylglucosaminidase [Glycine soja]6.3e-0851.19Show/hide
Query:  AIRSVQAMHSRSTTVTRDA-DSCSEFLLPFSSEHSLP-KQRSGLPERTLGGSFWKKGVTGTRPEKLLSEMLSTTRFCITAMVWR
        AI S   + SR+T  TR     CS+F LP    HSLP K  SG P  TL G F K  ++GTRP  LL EM STTRFC  A  WR
Subjt:  AIRSVQAMHSRSTTVTRDA-DSCSEFLLPFSSEHSLP-KQRSGLPERTLGGSFWKKGVTGTRPEKLLSEMLSTTRFCITAMVWR

RZB52587.1 Cytosolic endo-beta-N-acetylglucosaminidase 2 [Glycine soja]3.7e-0849.43Show/hide
Query:  AIRSVQAMHSRSTTVTRDA-DSCSEFLLPFSSEHSLP-KQRSGLPERTLGGSFWKKGVTGTRPEKLLSEMLSTTRFCITAMVWRSPL
        AI S   + SR+T  TR     CS+F LP    HSLP K  SG P  TL G F K  ++GTRP  LL EM STTRFC  A  W  P+
Subjt:  AIRSVQAMHSRSTTVTRDA-DSCSEFLLPFSSEHSLP-KQRSGLPERTLGGSFWKKGVTGTRPEKLLSEMLSTTRFCITAMVWRSPL

TrEMBL top hitse value%identityAlignment
A0A0A9D9B3 Uncharacterized protein3.6e-0934.55Show/hide
Query:  AAAIRSVQAMHSRSTTVTRDADSCSEFLLPFSSEHSLPKQRSGLPERTLGGSFWKKGVTGTRPEKLLSEMLSTTRFCITAMVWRSP---LMRTPSVSRRL
        AAA R      S +   TR A   +      S  H   +  +GLP  +L GSF K  ++G RP KLL +MLS TRF      WRSP   L  T S  RR 
Subjt:  AAAIRSVQAMHSRSTTVTRDADSCSEFLLPFSSEHSLPKQRSGLPERTLGGSFWKKGVTGTRPEKLLSEMLSTTRFCITAMVWRSP---LMRTPSVSRRL

Query:  VCSN-LGLERFPALEFLL-------------------ALPEDNRK-----EPSSLGIGPENRLLNRMSFVNELNSPRPGSMFPSMTLFEKS
          +N LG+    +L+  L                    LP  +R      EP S GI PE+R   R S V+E + P    + P MTL+E+S
Subjt:  VCSN-LGLERFPALEFLL-------------------ALPEDNRK-----EPSSLGIGPENRLLNRMSFVNELNSPRPGSMFPSMTLFEKS

A0A0B2PXD6 Cytosolic endo-beta-N-acetylglucosaminidase3.1e-0851.19Show/hide
Query:  AIRSVQAMHSRSTTVTRDA-DSCSEFLLPFSSEHSLP-KQRSGLPERTLGGSFWKKGVTGTRPEKLLSEMLSTTRFCITAMVWR
        AI S   + SR+T  TR     CS+F LP    HSLP K  SG P  TL G F K  ++GTRP  LL EM STTRFC  A  WR
Subjt:  AIRSVQAMHSRSTTVTRDA-DSCSEFLLPFSSEHSLP-KQRSGLPERTLGGSFWKKGVTGTRPEKLLSEMLSTTRFCITAMVWR

A0A445FUK1 Cytosolic endo-beta-N-acetylglucosaminidase 21.8e-0849.43Show/hide
Query:  AIRSVQAMHSRSTTVTRDA-DSCSEFLLPFSSEHSLP-KQRSGLPERTLGGSFWKKGVTGTRPEKLLSEMLSTTRFCITAMVWRSPL
        AI S   + SR+T  TR     CS+F LP    HSLP K  SG P  TL G F K  ++GTRP  LL EM STTRFC  A  W  P+
Subjt:  AIRSVQAMHSRSTTVTRDA-DSCSEFLLPFSSEHSLP-KQRSGLPERTLGGSFWKKGVTGTRPEKLLSEMLSTTRFCITAMVWRSPL

K7MT54 Uncharacterized protein3.6e-0950.57Show/hide
Query:  AIRSVQAMHSRSTTVTRDA-DSCSEFLLPFSSEHSLP-KQRSGLPERTLGGSFWKKGVTGTRPEKLLSEMLSTTRFCITAMVWRSPL
        AI S   + SR+T  TR     CS+F LP    HSLP K  SG P  TL GSF K  ++GTRP  LL EM STTRFC  A  W  P+
Subjt:  AIRSVQAMHSRSTTVTRDA-DSCSEFLLPFSSEHSLP-KQRSGLPERTLGGSFWKKGVTGTRPEKLLSEMLSTTRFCITAMVWRSPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATATTACAAAGTCTAACATAAATTACAAGTGGAAGAAGATAGATGAGAAAACCAAACATCTAACGCGCTTAAGCTCTGCAATTAGATCACCGAATGATGAGGATTA
TCCTGAAGAAGACGACGACGTCCTTCATCATCGGGCGATCATCGGCTCGATGATTGTTTTGGATCCAAAAGCTCGATTGGATCGTTCTGACTGTGTAGATGATGTTGAAC
CCATTGGATTATGTGTTGGCCTTCTGGAAATGAAGGATCGGCTGGCTTTTTACCGATTTACCAAATGGAAAAATCTGTACACTGTGCTCACCCGGTGCAATGTAGCCGTA
CGATCCAACGAATTGCGGTATATTTTGGACCTTCACGTCCCGGTGCGAAATCGCCGGCACGCAATCGTGATGCAAGTAAGACAATCCGTCCGCCACTCCGATCGCGATCT
TGAACCGAGCATTCCAGCCGATTATGTAACCACCGACGCAGTGCTCGTTCGGATGATATTCCGGTGCCGGATACTGGCTAGAGTCGAGATTTCAGAGGAGAATGCGGCGG
CGGCGAACTTCTCCGATGTCTTGAACCGTTTGACGGCGATTGTCGAGCTTCTGATAGAGCGTCATCTCCCATTCGAGTTCATTGCCAATCTCCAAGTCGCTATCGACGCC
GTCGCCGCCATGGCCTCCGTAGAAGCCGCCGCCATTAGAAGCGTCCAAGCTATGCATAGCAGAAGCACCACCGTCACACGAGACGCTGATTCATGCTCTGAATTTCTGCT
TCCCTTTTCGTCGGAGCATTCGCTGCCGAAGCAGAGGTCTGGATTGCCGGAGAGAACGTTGGGAGGGAGTTTTTGGAAGAAGGGAGTCACCGGCACTCGGCCTGAGAAAT
TGTTGTCGGAGATGTTGAGTACCACGAGATTTTGCATAACGGCGATGGTTTGGAGGTCGCCGCTGATGCGAACTCCTTCGGTATCTCGCCGTTTAGTTTGTTCCAACTTA
GGTTTAGAGCGATTTCCAGCGCTGGAATTTCTCCTAGCTCTGCCGGAAGATAACCGGAAAGAGCCGAGCTCTCTAGGGATTGGGCCGGAGAATCGATTGTTGAATAGAAT
GAGTTTTGTCAATGAGCTTAACAGTCCGAGACCAGGATCTATGTTCCCTTCAATGACATTATTTGAGAAGTCAATGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATATTACAAAGTCTAACATAAATTACAAGTGGAAGAAGATAGATGAGAAAACCAAACATCTAACGCGCTTAAGCTCTGCAATTAGATCACCGAATGATGAGGATTA
TCCTGAAGAAGACGACGACGTCCTTCATCATCGGGCGATCATCGGCTCGATGATTGTTTTGGATCCAAAAGCTCGATTGGATCGTTCTGACTGTGTAGATGATGTTGAAC
CCATTGGATTATGTGTTGGCCTTCTGGAAATGAAGGATCGGCTGGCTTTTTACCGATTTACCAAATGGAAAAATCTGTACACTGTGCTCACCCGGTGCAATGTAGCCGTA
CGATCCAACGAATTGCGGTATATTTTGGACCTTCACGTCCCGGTGCGAAATCGCCGGCACGCAATCGTGATGCAAGTAAGACAATCCGTCCGCCACTCCGATCGCGATCT
TGAACCGAGCATTCCAGCCGATTATGTAACCACCGACGCAGTGCTCGTTCGGATGATATTCCGGTGCCGGATACTGGCTAGAGTCGAGATTTCAGAGGAGAATGCGGCGG
CGGCGAACTTCTCCGATGTCTTGAACCGTTTGACGGCGATTGTCGAGCTTCTGATAGAGCGTCATCTCCCATTCGAGTTCATTGCCAATCTCCAAGTCGCTATCGACGCC
GTCGCCGCCATGGCCTCCGTAGAAGCCGCCGCCATTAGAAGCGTCCAAGCTATGCATAGCAGAAGCACCACCGTCACACGAGACGCTGATTCATGCTCTGAATTTCTGCT
TCCCTTTTCGTCGGAGCATTCGCTGCCGAAGCAGAGGTCTGGATTGCCGGAGAGAACGTTGGGAGGGAGTTTTTGGAAGAAGGGAGTCACCGGCACTCGGCCTGAGAAAT
TGTTGTCGGAGATGTTGAGTACCACGAGATTTTGCATAACGGCGATGGTTTGGAGGTCGCCGCTGATGCGAACTCCTTCGGTATCTCGCCGTTTAGTTTGTTCCAACTTA
GGTTTAGAGCGATTTCCAGCGCTGGAATTTCTCCTAGCTCTGCCGGAAGATAACCGGAAAGAGCCGAGCTCTCTAGGGATTGGGCCGGAGAATCGATTGTTGAATAGAAT
GAGTTTTGTCAATGAGCTTAACAGTCCGAGACCAGGATCTATGTTCCCTTCAATGACATTATTTGAGAAGTCAATGATTTGA
Protein sequenceShow/hide protein sequence
MHITKSNINYKWKKIDEKTKHLTRLSSAIRSPNDEDYPEEDDDVLHHRAIIGSMIVLDPKARLDRSDCVDDVEPIGLCVGLLEMKDRLAFYRFTKWKNLYTVLTRCNVAV
RSNELRYILDLHVPVRNRRHAIVMQVRQSVRHSDRDLEPSIPADYVTTDAVLVRMIFRCRILARVEISEENAAAANFSDVLNRLTAIVELLIERHLPFEFIANLQVAIDA
VAAMASVEAAAIRSVQAMHSRSTTVTRDADSCSEFLLPFSSEHSLPKQRSGLPERTLGGSFWKKGVTGTRPEKLLSEMLSTTRFCITAMVWRSPLMRTPSVSRRLVCSNL
GLERFPALEFLLALPEDNRKEPSSLGIGPENRLLNRMSFVNELNSPRPGSMFPSMTLFEKSMI