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Lsi02G003980 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G003980
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:3378714..3379181
RNA-Seq ExpressionLsi02G003980
SyntenyLsi02G003980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON96697.1 hypothetical protein TorRG33x02_074010 [Trema orientale]6.6e-0950Show/hide
Query:  LENFIPVRLPMGAKWELLGSEALKPTKQP-----------RRELVVLNGEGVEMMFKGTWVRIGWPLARNSEPFKVIE
        L N +P+  P+GA W LLG  A KPTKQP             E     GEGV MM  GTWVRIG PLARN  P +VI+
Subjt:  LENFIPVRLPMGAKWELLGSEALKPTKQP-----------RRELVVLNGEGVEMMFKGTWVRIGWPLARNSEPFKVIE
TrEMBL top hitse value%identityAlignment
A0A2P5FFY5 Uncharacterized protein3.2e-0950Show/hide
Query:  LENFIPVRLPMGAKWELLGSEALKPTKQP-----------RRELVVLNGEGVEMMFKGTWVRIGWPLARNSEPFKVIE
        L N +P+  P+GA W LLG  A KPTKQP             E     GEGV MM  GTWVRIG PLARN  P +VI+
Subjt:  LENFIPVRLPMGAKWELLGSEALKPTKQP-----------RRELVVLNGEGVEMMFKGTWVRIGWPLARNSEPFKVIE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACGGCCGCAAGTGCCGGCCCAGTGGGTGGTCCACCAGACTTTGAATCTGAAGAGACTCGAGAATTTTATACCTGTGAGGTTGCCGATGGGAGCTAAGTGGGAGCT
TTTGGGCTCAGAGGCATTGAAGCCAACAAAACAGCCGAGGAGGGAGTTGGTGGTTTTGAATGGAGAAGGAGTGGAGATGATGTTTAAAGGGACATGGGTGAGAATTGGGT
GGCCATTGGCAAGAAATTCTGAGCCTTTTAAGGTGATTGAGAGATTGGGTGAGGGACTGTCTAGCAAGGTGGGGATTATGTTTATGGCGTTTTTGGTTAAGCTTGGTGGA
GCCATGAGGAAGATGGGGAGAAAATGGAGGAGGATGAGAGTTTTGTTGAGGTTTGGGTTTGGTGGAGAAGGAATAAGGAAGGTTTATATAGAGAAAGAAAACGACATGGA
AGCTTACAAGTGTTGTATTTGTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCACGGCCGCAAGTGCCGGCCCAGTGGGTGGTCCACCAGACTTTGAATCTGAAGAGACTCGAGAATTTTATACCTGTGAGGTTGCCGATGGGAGCTAAGTGGGAGCT
TTTGGGCTCAGAGGCATTGAAGCCAACAAAACAGCCGAGGAGGGAGTTGGTGGTTTTGAATGGAGAAGGAGTGGAGATGATGTTTAAAGGGACATGGGTGAGAATTGGGT
GGCCATTGGCAAGAAATTCTGAGCCTTTTAAGGTGATTGAGAGATTGGGTGAGGGACTGTCTAGCAAGGTGGGGATTATGTTTATGGCGTTTTTGGTTAAGCTTGGTGGA
GCCATGAGGAAGATGGGGAGAAAATGGAGGAGGATGAGAGTTTTGTTGAGGTTTGGGTTTGGTGGAGAAGGAATAAGGAAGGTTTATATAGAGAAAGAAAACGACATGGA
AGCTTACAAGTGTTGTATTTGTGTTTGA
Protein sequenceShow/hide protein sequence
MSRPQVPAQWVVHQTLNLKRLENFIPVRLPMGAKWELLGSEALKPTKQPRRELVVLNGEGVEMMFKGTWVRIGWPLARNSEPFKVIERLGEGLSSKVGIMFMAFLVKLGG
AMRKMGRKWRRMRVLLRFGFGGEGIRKVYIEKENDMEAYKCCICV