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Lsi02G004160 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G004160
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein DEHYDRATION-INDUCED 19 homolog 5-like
Genome locationchr02:3470331..3474188
RNA-Seq ExpressionLsi02G004160
SyntenyLsi02G004160
Gene Ontology termsNA
InterPro domainsIPR027935 - Protein dehydration-induced 19, C-terminal
IPR033347 - Protein DEHYDRATION-INDUCED 19


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008438990.1 PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 5-like isoform X1 [Cucumis melo]1.5e-4963.64Show/hide
Query:  MEFNFWASRVHPTDQLSAVQAAMLHSGLSSMCSQS-RERCNWAFYSTSF---KLNKGIFCS----PHCFHGCNYEQLLKSKIL-------------PSLQ
        MEF+FWASRVHPTDQLSAVQAAMLHSG   +   S  E  +  ++S  +    +   + CS     HCF   N    L +  L              S++
Subjt:  MEFNFWASRVHPTDQLSAVQAAMLHSGLSSMCSQS-RERCNWAFYSTSF---KLNKGIFCS----PHCFHGCNYEQLLKSKIL-------------PSLQ

Query:  RRRKPDKSVSSAFISKKLITKSREKRNGSAPDPLLPFICSIPFSDPESVERDDRSENDASVAANVESNSSQLLERNQNSEELNQRASFVQQLITSTIF
        RRRKP+KSVSS F SKK+ITKSREKRNGSAPDPLLPFICSIPFSD ES ERDD SENDA VAAN++SNSSQLLERNQNSEELNQRASFVQQLITSTIF
Subjt:  RRRKPDKSVSSAFISKKLITKSREKRNGSAPDPLLPFICSIPFSDPESVERDDRSENDASVAANVESNSSQLLERNQNSEELNQRASFVQQLITSTIF

XP_008438998.1 PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 5-like isoform X2 [Cucumis melo]4.4e-4964.21Show/hide
Query:  MEFNFWASRVHPTDQLSAVQAAMLHSGLSSMCSQSRERCNWAFYSTSFKLNKGIFCSPHCFHGCNYEQLLKSKIL-------------PSLQRRRKPDKS
        MEF+FWASRVHPTDQLSAVQAAMLHS      S+    C + +     ++        HCF   N    L +  L              S++RRRKP+KS
Subjt:  MEFNFWASRVHPTDQLSAVQAAMLHSGLSSMCSQSRERCNWAFYSTSFKLNKGIFCSPHCFHGCNYEQLLKSKIL-------------PSLQRRRKPDKS

Query:  VSSAFISKKLITKSREKRNGSAPDPLLPFICSIPFSDPESVERDDRSENDASVAANVESNSSQLLERNQNSEELNQRASFVQQLITSTIF
        VSS F SKK+ITKSREKRNGSAPDPLLPFICSIPFSD ES ERDD SENDA VAAN++SNSSQLLERNQNSEELNQRASFVQQLITSTIF
Subjt:  VSSAFISKKLITKSREKRNGSAPDPLLPFICSIPFSDPESVERDDRSENDASVAANVESNSSQLLERNQNSEELNQRASFVQQLITSTIF

XP_011651802.1 protein DEHYDRATION-INDUCED 19 homolog 5 isoform X1 [Cucumis sativus]1.5e-4963.13Show/hide
Query:  MEFNFWASRVHPTDQLSAVQAAMLHSGLSSMCSQS-RERCNWAFYSTSF---KLNKGIFCS----PHCFHGCNYEQLLKSKIL-------------PSLQ
        MEFNFWASRVHPTDQLSAVQAAMLHSG   +   S  E  +  ++S  +    +   + CS     HCF   N    L +  L              S++
Subjt:  MEFNFWASRVHPTDQLSAVQAAMLHSGLSSMCSQS-RERCNWAFYSTSF---KLNKGIFCS----PHCFHGCNYEQLLKSKIL-------------PSLQ

Query:  RRRKPDKSVSSAFISKKLITKSREKRNGSAPDPLLPFICSIPFSDPESVERDDRSENDASVAANVESNSSQLLERNQNSEELNQRASFVQQLITSTIF
        RR+KP+KSVSS F SKK+ITK REKRNGSAPDPLLPFICSIPFSD ES ERDDRSENDASVA N++SNSSQLLERNQNSEELN+RASFVQQLITSTIF
Subjt:  RRRKPDKSVSSAFISKKLITKSREKRNGSAPDPLLPFICSIPFSDPESVERDDRSENDASVAANVESNSSQLLERNQNSEELNQRASFVQQLITSTIF

XP_038894588.1 protein DEHYDRATION-INDUCED 19 homolog 5-like isoform X1 [Benincasa hispida]1.2e-5165.66Show/hide
Query:  MEFNFWASRVHPTDQLSAVQAAMLHSGLSSMCSQS-RERCNWAFYSTSF---KLNKGIFCS----PHCFHGCNYEQLLKSKIL-------------PSLQ
        ME NFWASRVHPTDQLSAVQAAMLHSG   +   S  E  +  ++S  +    +   + CS     HCF   N    L +  L              S++
Subjt:  MEFNFWASRVHPTDQLSAVQAAMLHSGLSSMCSQS-RERCNWAFYSTSF---KLNKGIFCS----PHCFHGCNYEQLLKSKIL-------------PSLQ

Query:  RRRKPDKSVSSAFISKKLITKSREKRNGSAPDPLLPFICSIPFSDPESVERDDRSENDASVAANVESNSSQLLERNQNSEELNQRASFVQQLITSTIF
        RRRKP+KSVSS F SKKLITKS +KRNGSAPDPLLPFICSIPFSDPESVERDDRSENDASVAANVESNSSQLLER+QNSEELNQRASFVQQLITSTIF
Subjt:  RRRKPDKSVSSAFISKKLITKSREKRNGSAPDPLLPFICSIPFSDPESVERDDRSENDASVAANVESNSSQLLERNQNSEELNQRASFVQQLITSTIF

XP_038894589.1 protein DEHYDRATION-INDUCED 19 homolog 5-like isoform X2 [Benincasa hispida]3.6e-5166.32Show/hide
Query:  MEFNFWASRVHPTDQLSAVQAAMLHSGLSSMCSQSRERCNWAFYSTSFKLNKGIFCSPHCFHGCNYEQLLKSKIL-------------PSLQRRRKPDKS
        ME NFWASRVHPTDQLSAVQAAMLHS      S+    C + +     ++        HCF   N    L +  L              S++RRRKP+KS
Subjt:  MEFNFWASRVHPTDQLSAVQAAMLHSGLSSMCSQSRERCNWAFYSTSFKLNKGIFCSPHCFHGCNYEQLLKSKIL-------------PSLQRRRKPDKS

Query:  VSSAFISKKLITKSREKRNGSAPDPLLPFICSIPFSDPESVERDDRSENDASVAANVESNSSQLLERNQNSEELNQRASFVQQLITSTIF
        VSS F SKKLITKS +KRNGSAPDPLLPFICSIPFSDPESVERDDRSENDASVAANVESNSSQLLER+QNSEELNQRASFVQQLITSTIF
Subjt:  VSSAFISKKLITKSREKRNGSAPDPLLPFICSIPFSDPESVERDDRSENDASVAANVESNSSQLLERNQNSEELNQRASFVQQLITSTIF

TrEMBL top hitse value%identityAlignment
A0A0A0LWF6 Uncharacterized protein7.2e-5063.13Show/hide
Query:  MEFNFWASRVHPTDQLSAVQAAMLHSGLSSMCSQS-RERCNWAFYSTSF---KLNKGIFCS----PHCFHGCNYEQLLKSKIL-------------PSLQ
        MEFNFWASRVHPTDQLSAVQAAMLHSG   +   S  E  +  ++S  +    +   + CS     HCF   N    L +  L              S++
Subjt:  MEFNFWASRVHPTDQLSAVQAAMLHSGLSSMCSQS-RERCNWAFYSTSF---KLNKGIFCS----PHCFHGCNYEQLLKSKIL-------------PSLQ

Query:  RRRKPDKSVSSAFISKKLITKSREKRNGSAPDPLLPFICSIPFSDPESVERDDRSENDASVAANVESNSSQLLERNQNSEELNQRASFVQQLITSTIF
        RR+KP+KSVSS F SKK+ITK REKRNGSAPDPLLPFICSIPFSD ES ERDDRSENDASVA N++SNSSQLLERNQNSEELN+RASFVQQLITSTIF
Subjt:  RRRKPDKSVSSAFISKKLITKSREKRNGSAPDPLLPFICSIPFSDPESVERDDRSENDASVAANVESNSSQLLERNQNSEELNQRASFVQQLITSTIF

A0A1S3AXR6 protein DEHYDRATION-INDUCED 19 homolog 5-like isoform X17.2e-5063.64Show/hide
Query:  MEFNFWASRVHPTDQLSAVQAAMLHSGLSSMCSQS-RERCNWAFYSTSF---KLNKGIFCS----PHCFHGCNYEQLLKSKIL-------------PSLQ
        MEF+FWASRVHPTDQLSAVQAAMLHSG   +   S  E  +  ++S  +    +   + CS     HCF   N    L +  L              S++
Subjt:  MEFNFWASRVHPTDQLSAVQAAMLHSGLSSMCSQS-RERCNWAFYSTSF---KLNKGIFCS----PHCFHGCNYEQLLKSKIL-------------PSLQ

Query:  RRRKPDKSVSSAFISKKLITKSREKRNGSAPDPLLPFICSIPFSDPESVERDDRSENDASVAANVESNSSQLLERNQNSEELNQRASFVQQLITSTIF
        RRRKP+KSVSS F SKK+ITKSREKRNGSAPDPLLPFICSIPFSD ES ERDD SENDA VAAN++SNSSQLLERNQNSEELNQRASFVQQLITSTIF
Subjt:  RRRKPDKSVSSAFISKKLITKSREKRNGSAPDPLLPFICSIPFSDPESVERDDRSENDASVAANVESNSSQLLERNQNSEELNQRASFVQQLITSTIF

A0A1S3AYC1 protein DEHYDRATION-INDUCED 19 homolog 5-like isoform X22.1e-4964.21Show/hide
Query:  MEFNFWASRVHPTDQLSAVQAAMLHSGLSSMCSQSRERCNWAFYSTSFKLNKGIFCSPHCFHGCNYEQLLKSKIL-------------PSLQRRRKPDKS
        MEF+FWASRVHPTDQLSAVQAAMLHS      S+    C + +     ++        HCF   N    L +  L              S++RRRKP+KS
Subjt:  MEFNFWASRVHPTDQLSAVQAAMLHSGLSSMCSQSRERCNWAFYSTSFKLNKGIFCSPHCFHGCNYEQLLKSKIL-------------PSLQRRRKPDKS

Query:  VSSAFISKKLITKSREKRNGSAPDPLLPFICSIPFSDPESVERDDRSENDASVAANVESNSSQLLERNQNSEELNQRASFVQQLITSTIF
        VSS F SKK+ITKSREKRNGSAPDPLLPFICSIPFSD ES ERDD SENDA VAAN++SNSSQLLERNQNSEELNQRASFVQQLITSTIF
Subjt:  VSSAFISKKLITKSREKRNGSAPDPLLPFICSIPFSDPESVERDDRSENDASVAANVESNSSQLLERNQNSEELNQRASFVQQLITSTIF

A0A6J1C7B5 protein DEHYDRATION-INDUCED 19 homolog 5-like4.9e-4661.31Show/hide
Query:  MEFNFWASRVHPTDQLSAVQAAMLHSGLSSMCSQS-RERCNWAFYSTSF---KLNKGIFCS----PHCFHGCNYEQLLKSKIL-------------PSLQ
        M FNFWASRVHPT+Q SAVQAAMLHSG   +   S  E  + A++S  +    +   + CS     HCF   N    L +  L              S++
Subjt:  MEFNFWASRVHPTDQLSAVQAAMLHSGLSSMCSQS-RERCNWAFYSTSF---KLNKGIFCS----PHCFHGCNYEQLLKSKIL-------------PSLQ

Query:  RRRKPDKSVSSAFISKKLITKSREKRNGSAPDPLLPFICSIPFSDPESVERDDRSENDASVAANVESNSSQLLERNQ-NSEELNQRASFVQQLITSTIF
        RRR+PDKSVSSAF SKKL TKSRE ++GSA DPLLPFICSIPFSDPES ERDD SEND+SVA NVESN S LLERNQ NSEELNQRASFVQQLITSTIF
Subjt:  RRRKPDKSVSSAFISKKLITKSREKRNGSAPDPLLPFICSIPFSDPESVERDDRSENDASVAANVESNSSQLLERNQ-NSEELNQRASFVQQLITSTIF

A0A6J1E7M7 protein DEHYDRATION-INDUCED 19 homolog 5-like2.4e-4561.31Show/hide
Query:  MEFNFWASRVHPTDQLSAVQAAMLHSGLSSMCSQS-RERCNWAFYSTSF---KLNKGIFCS----PHCFHGCNYEQLLKSKIL-------------PSLQ
        MEFNFWASRVH T+QLSAVQAAMLHSG   +   S  E    A++S  +    +   + CS     HCF   N    L +  L              S++
Subjt:  MEFNFWASRVHPTDQLSAVQAAMLHSGLSSMCSQS-RERCNWAFYSTSF---KLNKGIFCS----PHCFHGCNYEQLLKSKIL-------------PSLQ

Query:  RRRKPDKSVSSAFISKKLITKSREKRNGSAPDPLLPFICSIPFSDPESVERDDRSENDASV-AANVESNSSQLLERNQNSEELNQRASFVQQLITSTIF
        RRRKP+K VS+AF SKKL TKSR ++NGSAPDPLLPFICSIPFSDPESVERDD S ND SV AANV SN S LLERNQNSEELNQRASFVQQLITSTIF
Subjt:  RRRKPDKSVSSAFISKKLITKSREKRNGSAPDPLLPFICSIPFSDPESVERDDRSENDASV-AANVESNSSQLLERNQNSEELNQRASFVQQLITSTIF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTCAATTTTTGGGCCTCAAGGGTTCATCCCACTGACCAACTTTCTGCTGTCCAAGCCGCCATGCTTCATTCTGGTTTGTCCTCTATGTGCAGCCAGTCTAGGGA
AAGATGTAATTGGGCATTTTACAGCACATCATTCAAGCTCAATAAAGGTATTTTCTGTTCACCTCATTGCTTTCATGGTTGTAATTATGAGCAATTGCTTAAAAGCAAAA
TATTACCATCATTGCAGAGGAGGAGAAAACCTGACAAATCTGTCTCTTCTGCATTTATTTCCAAGAAGCTGATAACAAAGAGCAGGGAAAAAAGAAATGGATCTGCACCT
GATCCCCTTCTACCCTTTATCTGCAGCATTCCTTTCTCAGACCCTGAATCTGTCGAGAGGGATGACCGTTCAGAAAACGATGCCTCCGTTGCGGCTAATGTCGAAAGTAA
TAGTTCACAGTTGCTGGAAAGAAACCAGAACAGTGAAGAGTTGAATCAGAGAGCATCTTTTGTACAACAATTAATCACATCAACCATTTTTTAG
mRNA sequenceShow/hide mRNA sequence
GAACTTTTTGCTAAGCTGTAAGTTGTAACCTCATGCCTCTATTAGAAAGCTTTCGGCTTTTGGGAAAAAATGGGTCAGTATATGAATAAGCAAACACCGCACCACACAAC
CCATCCACCAGGCCCAAGCTGATGACAAGGATTGTTTTTCTTTTCTTTCTTCTTCCCAAAGTTATCGACACCCATTTGCCTAATTCCTAATTTCACACACTTGTCCTCTC
ACAATCTGACTTCGGACTTGCTCTGTAACACAGAATCAAGCTATGGAGTTCAATTTTTGGGCCTCAAGGGTTCATCCCACTGACCAACTTTCTGCTGTCCAAGCCGCCAT
GCTTCATTCTGGTTTGTCCTCTATGTGCAGCCAGTCTAGGGAAAGATGTAATTGGGCATTTTACAGCACATCATTCAAGCTCAATAAAGGTATTTTCTGTTCACCTCATT
GCTTTCATGGTTGTAATTATGAGCAATTGCTTAAAAGCAAAATATTACCATCATTGCAGAGGAGGAGAAAACCTGACAAATCTGTCTCTTCTGCATTTATTTCCAAGAAG
CTGATAACAAAGAGCAGGGAAAAAAGAAATGGATCTGCACCTGATCCCCTTCTACCCTTTATCTGCAGCATTCCTTTCTCAGACCCTGAATCTGTCGAGAGGGATGACCG
TTCAGAAAACGATGCCTCCGTTGCGGCTAATGTCGAAAGTAATAGTTCACAGTTGCTGGAAAGAAACCAGAACAGTGAAGAGTTGAATCAGAGAGCATCTTTTGTACAAC
AATTAATCACATCAACCATTTTTTAGGTCTCTTCCCATCACCTGTGATTGCTTCTGTGGTGCTGCAGTTAATATTCATCTCTAATTGGTTGCCGGGGAAGTTGTATCGAT
CAGCATAATGTTCTAAGACTGGTGCTTGATTTTGATAGGAAAATATTTCAGATATCAGTTAAGCCAGAGGAATCATTTGTGTTCAAATGCTGCTGTTTTACATATACGTA
TATATATATATATAGATGTATCATTGCAAACGTGGTAGAAACTGGAACATCTTTAACTAGTAACTGCAGCTTACATAAGAATATTATTACAACAGCTACCTTGATGTGGT
ACTATAGGTAGGATTTATCAGACTTTTTAAGACTCACTCAGCAGATTCAGAGTAGAATCATTTCCAGCAAATCTTTATTATTATTATTATTATTATAATGTATGTGGTAT
TCGACACAACACGAG
Protein sequenceShow/hide protein sequence
MEFNFWASRVHPTDQLSAVQAAMLHSGLSSMCSQSRERCNWAFYSTSFKLNKGIFCSPHCFHGCNYEQLLKSKILPSLQRRRKPDKSVSSAFISKKLITKSREKRNGSAP
DPLLPFICSIPFSDPESVERDDRSENDASVAANVESNSSQLLERNQNSEELNQRASFVQQLITSTIF