; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G004690 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G004690
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRING-type domain-containing protein
Genome locationchr02:3912797..3915745
RNA-Seq ExpressionLsi02G004690
SyntenyLsi02G004690
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site
IPR024064 - FdhE-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055299.1 RING-H2 finger protein ATL47-like [Cucumis melo var. makuwa]2.8e-10677.87Show/hide
Query:  MLDCYQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKL-------------------------------------VDSDGRPYISSYGRK
        MLDCYQRL SGHSY DFLEFLEADIRHANAFAASFPR KD SSF+MKL                                     VD  GRP ISSYGRK
Subjt:  MLDCYQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKL-------------------------------------VDSDGRPYISSYGRK

Query:  ATISEFYSVILPSLQRLCDYASQVDSIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKR
        ATISEFYSVILPSLQRLCDYASQV+SIEDLHKGM ISKRLEHKRE LDL+IEREDECGIC ESRTKIVLP+CCHAMCTNCYHDWKSKSESCPFCRGSLKR
Subjt:  ATISEFYSVILPSLQRLCDYASQVDSIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKR

Query:  VASGDLWVLTCSNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMYYEHLL
        VASGDLWVLTC NDV+DT T+MKEDMLRFYLFINNLP+DTPDVLFLMYYEHLL
Subjt:  VASGDLWVLTCSNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMYYEHLL

XP_011651953.1 E3 ubiquitin-protein ligase AIRP2 isoform X2 [Cucumis sativus]5.6e-10778.26Show/hide
Query:  MLDCYQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKL-------------------------------------VDSDGRPYISSYGRK
        MLDCYQRLSSGHSY DFLEFLEADIRHANAFAASFPR KDGSSFQMKL                                     VD  GRP ISSYGRK
Subjt:  MLDCYQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKL-------------------------------------VDSDGRPYISSYGRK

Query:  ATISEFYSVILPSLQRLCDYASQVDSIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKR
        ATISEFYSVILPSL+RLCDYASQ++SIEDLHKGM ISKRLEHKRE LDL+IEREDECGIC ESRTKIVLP+CCHAMCTNCYHDWKSKSESCPFCRGSLKR
Subjt:  ATISEFYSVILPSLQRLCDYASQVDSIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKR

Query:  VASGDLWVLTCSNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMYYEHLL
        VASGDLWVLTC NDVVD RTIMKEDMLRFYLF+NNLP+DTPDVLFLM YEHLL
Subjt:  VASGDLWVLTCSNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMYYEHLL

XP_016901782.1 PREDICTED: RING-H2 finger protein ATL47-like [Cucumis melo]8.1e-10677.47Show/hide
Query:  MLDCYQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKL-------------------------------------VDSDGRPYISSYGRK
        MLDCYQRL SGHSY DFLEFLEADIRHANAFAASFPR KD SSF+MKL                                     VD  GRP ISSYGRK
Subjt:  MLDCYQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKL-------------------------------------VDSDGRPYISSYGRK

Query:  ATISEFYSVILPSLQRLCDYASQVDSIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKR
        ATISEFYSVILPSLQRLCDYASQV+SIEDLHKGM ISKRLEHKRE LDL+IEREDECGIC ESRTKIVLP+CCHAMCTNCYHDWKSKSESCPFCRGSLKR
Subjt:  ATISEFYSVILPSLQRLCDYASQVDSIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKR

Query:  VASGDLWVLTCSNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMYYEHLL
        VASGDLWVLTC NDV+DT T++KEDMLRFYLFINNLP+DTPDVLFLMYYEHLL
Subjt:  VASGDLWVLTCSNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMYYEHLL

XP_022137104.1 uncharacterized protein LOC111008662 [Momordica charantia]3.2e-10275.49Show/hide
Query:  MLDCYQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKL-------------------------------------VDSDGRPYISSYGRK
        MLD YQRLSSG SYKDF+EFLEADIRHAN  AASFPRGKDGSSFQMKL                                     V SDGRP ISS G+K
Subjt:  MLDCYQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKL-------------------------------------VDSDGRPYISSYGRK

Query:  ATISEFYSVILPSLQRLCDYASQVDSIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKR
        ATISEFYSVILPSLQRLCDYASQVD IEDL  GM ISKRLEHK++LL++D EREDECGIC+E RTKIVLPHCCHAMCT+CYHDWKSKSESCPFCRGSLKR
Subjt:  ATISEFYSVILPSLQRLCDYASQVDSIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKR

Query:  VASGDLWVLTCSNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMYYEHLL
        VASGDLWVL CSNDVVDTRT MKEDMLRFYLFIN+LP+DTPDVLFLMYYEHLL
Subjt:  VASGDLWVLTCSNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMYYEHLL

XP_031737753.1 E3 ubiquitin-protein ligase AIRP2 isoform X1 [Cucumis sativus]2.2e-8775.11Show/hide
Query:  ASFPRGKDGSSFQMKL-------------------------------------VDSDGRPYISSYGRKATISEFYSVILPSLQRLCDYASQVDSIEDLHK
        +SFPR KDGSSFQMKL                                     VD  GRP ISSYGRKATISEFYSVILPSL+RLCDYASQ++SIEDLHK
Subjt:  ASFPRGKDGSSFQMKL-------------------------------------VDSDGRPYISSYGRKATISEFYSVILPSLQRLCDYASQVDSIEDLHK

Query:  GMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKRVASGDLWVLTCSNDVVDTRTIMKEDMLRFYLF
        GM ISKRLEHKRE LDL+IEREDECGIC ESRTKIVLP+CCHAMCTNCYHDWKSKSESCPFCRGSLKRVASGDLWVLTC NDVVD RTIMKEDMLRFYLF
Subjt:  GMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKRVASGDLWVLTCSNDVVDTRTIMKEDMLRFYLF

Query:  INNLPDDTPDVLFLMYYEHLL
        +NNLP+DTPDVLFLM YEHLL
Subjt:  INNLPDDTPDVLFLMYYEHLL

TrEMBL top hitse value%identityAlignment
A0A0A0LU99 RING-type domain-containing protein2.7e-10778.26Show/hide
Query:  MLDCYQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKL-------------------------------------VDSDGRPYISSYGRK
        MLDCYQRLSSGHSY DFLEFLEADIRHANAFAASFPR KDGSSFQMKL                                     VD  GRP ISSYGRK
Subjt:  MLDCYQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKL-------------------------------------VDSDGRPYISSYGRK

Query:  ATISEFYSVILPSLQRLCDYASQVDSIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKR
        ATISEFYSVILPSL+RLCDYASQ++SIEDLHKGM ISKRLEHKRE LDL+IEREDECGIC ESRTKIVLP+CCHAMCTNCYHDWKSKSESCPFCRGSLKR
Subjt:  ATISEFYSVILPSLQRLCDYASQVDSIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKR

Query:  VASGDLWVLTCSNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMYYEHLL
        VASGDLWVLTC NDVVD RTIMKEDMLRFYLF+NNLP+DTPDVLFLM YEHLL
Subjt:  VASGDLWVLTCSNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMYYEHLL

A0A1S4E0L5 RING-H2 finger protein ATL47-like3.9e-10677.47Show/hide
Query:  MLDCYQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKL-------------------------------------VDSDGRPYISSYGRK
        MLDCYQRL SGHSY DFLEFLEADIRHANAFAASFPR KD SSF+MKL                                     VD  GRP ISSYGRK
Subjt:  MLDCYQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKL-------------------------------------VDSDGRPYISSYGRK

Query:  ATISEFYSVILPSLQRLCDYASQVDSIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKR
        ATISEFYSVILPSLQRLCDYASQV+SIEDLHKGM ISKRLEHKRE LDL+IEREDECGIC ESRTKIVLP+CCHAMCTNCYHDWKSKSESCPFCRGSLKR
Subjt:  ATISEFYSVILPSLQRLCDYASQVDSIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKR

Query:  VASGDLWVLTCSNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMYYEHLL
        VASGDLWVLTC NDV+DT T++KEDMLRFYLFINNLP+DTPDVLFLMYYEHLL
Subjt:  VASGDLWVLTCSNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMYYEHLL

A0A5A7UPB0 RING-H2 finger protein ATL47-like1.3e-10677.87Show/hide
Query:  MLDCYQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKL-------------------------------------VDSDGRPYISSYGRK
        MLDCYQRL SGHSY DFLEFLEADIRHANAFAASFPR KD SSF+MKL                                     VD  GRP ISSYGRK
Subjt:  MLDCYQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKL-------------------------------------VDSDGRPYISSYGRK

Query:  ATISEFYSVILPSLQRLCDYASQVDSIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKR
        ATISEFYSVILPSLQRLCDYASQV+SIEDLHKGM ISKRLEHKRE LDL+IEREDECGIC ESRTKIVLP+CCHAMCTNCYHDWKSKSESCPFCRGSLKR
Subjt:  ATISEFYSVILPSLQRLCDYASQVDSIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKR

Query:  VASGDLWVLTCSNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMYYEHLL
        VASGDLWVLTC NDV+DT T+MKEDMLRFYLFINNLP+DTPDVLFLMYYEHLL
Subjt:  VASGDLWVLTCSNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMYYEHLL

A0A5D3BIW1 RING-H2 finger protein ATL47-like3.9e-10677.47Show/hide
Query:  MLDCYQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKL-------------------------------------VDSDGRPYISSYGRK
        MLDCYQRL SGHSY DFLEFLEADIRHANAFAASFPR KD SSF+MKL                                     VD  GRP ISSYGRK
Subjt:  MLDCYQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKL-------------------------------------VDSDGRPYISSYGRK

Query:  ATISEFYSVILPSLQRLCDYASQVDSIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKR
        ATISEFYSVILPSLQRLCDYASQV+SIEDLHKGM ISKRLEHKRE LDL+IEREDECGIC ESRTKIVLP+CCHAMCTNCYHDWKSKSESCPFCRGSLKR
Subjt:  ATISEFYSVILPSLQRLCDYASQVDSIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKR

Query:  VASGDLWVLTCSNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMYYEHLL
        VASGDLWVLTC NDV+DT T++KEDMLRFYLFINNLP+DTPDVLFLMYYEHLL
Subjt:  VASGDLWVLTCSNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMYYEHLL

A0A6J1C699 uncharacterized protein LOC1110086621.5e-10275.49Show/hide
Query:  MLDCYQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKL-------------------------------------VDSDGRPYISSYGRK
        MLD YQRLSSG SYKDF+EFLEADIRHAN  AASFPRGKDGSSFQMKL                                     V SDGRP ISS G+K
Subjt:  MLDCYQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKL-------------------------------------VDSDGRPYISSYGRK

Query:  ATISEFYSVILPSLQRLCDYASQVDSIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKR
        ATISEFYSVILPSLQRLCDYASQVD IEDL  GM ISKRLEHK++LL++D EREDECGIC+E RTKIVLPHCCHAMCT+CYHDWKSKSESCPFCRGSLKR
Subjt:  ATISEFYSVILPSLQRLCDYASQVDSIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKR

Query:  VASGDLWVLTCSNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMYYEHLL
        VASGDLWVL CSNDVVDTRT MKEDMLRFYLFIN+LP+DTPDVLFLMYYEHLL
Subjt:  VASGDLWVLTCSNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMYYEHLL

SwissProt top hitse value%identityAlignment
Q14527 Helicase-like transcription factor1.4e-0429.01Show/hide
Query:  VDSDGRPYISSYGRKATISEFYSVILPSLQRL---CDYA------------SQVDSIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLP
        V ++GR  I  Y  + T+   Y+ +L  L RL   C +             S  D+ E+L       K+L  K +L+ L    ++EC ICL+S T  V+ 
Subjt:  VDSDGRPYISSYGRKATISEFYSVILPSLQRL---CDYA------------SQVDSIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLP

Query:  HCCHAMCTNCYHDWKSKSE---SCPFCRGSL
        HC H  C  C        +    CP CR  +
Subjt:  HCCHAMCTNCYHDWKSKSE---SCPFCRGSL

Q6PCN7 Helicase-like transcription factor1.9e-0428.91Show/hide
Query:  VDSDGRPYISSYGRKATISEFYSVILPSLQRLCDYASQVDSIEDLHKGMTIS--KRLEHKRELLDLDIER---------EDECGICLESRTKIVLPHCCH
        V ++G+  I  Y  + T+   Y+ +L  L RL            L  GM+ S   R +   EL  + IE+         ++EC ICL+S T  V+ HC H
Subjt:  VDSDGRPYISSYGRKATISEFYSVILPSLQRLCDYASQVDSIEDLHKGMTIS--KRLEHKRELLDLDIER---------EDECGICLESRTKIVLPHCCH

Query:  AMCTNC----YHDWKSKSESCPFCRGSL
          C  C     H  +     CP CR  +
Subjt:  AMCTNC----YHDWKSKSESCPFCRGSL

Q95216 Helicase-like transcription factor1.1e-0428.24Show/hide
Query:  VDSDGRPYISSYGRKATISEFYSVILPSLQRL---CDYA------------SQVDSIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLP
        V S+G+  I  Y  + T+   Y+ +L  L RL   C +             S  D+ E+L K +        K+  L L    ++EC ICL+S T  V+ 
Subjt:  VDSDGRPYISSYGRKATISEFYSVILPSLQRL---CDYA------------SQVDSIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLP

Query:  HCCHAMCTNCYHDWKSKSE---SCPFCRGSL
        HC H  C  C        +    CP CR  +
Subjt:  HCCHAMCTNCYHDWKSKSE---SCPFCRGSL

Q9M022 E3 ubiquitin-protein ligase AIRP22.5e-4139.24Show/hide
Query:  SYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKLVDS---------------------------------DGRPYISSYGRKATISEFYSVILPSLQR
        S+KD L+ LEADI+ AN  A+ +P   DG   QM+L  S                                 DG+  +S + RK +I EFY V+ PSL +
Subjt:  SYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKLVDS---------------------------------DGRPYISSYGRKATISEFYSVILPSLQR

Query:  LCDYASQVDSIEDLHKGMTISKRLE-----HKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKRVASGDLWVLTC
        L      +  +E+  +     KR        K ++ ++D+ERE+ECGICLE R K+VLP C H+MC NCY +W+++S+SCPFCRGSLKRV SGDLW+ TC
Subjt:  LCDYASQVDSIEDLHKGMTISKRLE-----HKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKRVASGDLWVLTC

Query:  SNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMY
        S ++ D   I KE++ R  ++I+ LP  T D   + Y
Subjt:  SNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMY

Arabidopsis top hitse value%identityAlignment
AT1G13195.1 RING/U-box superfamily protein2.5e-5747.2Show/hide
Query:  SSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKL-------------------------------------VDSDGRPYISSYGRKATISEFYS
        SS  SY + L+ LEAD++HAN+ A + P GK+    QMKL                                     V SDG+P ++++GRKATISEFY 
Subjt:  SSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKL-------------------------------------VDSDGRPYISSYGRKATISEFYS

Query:  VILPSLQRLCDYASQVDSIEDLHKGMTISKRLEHK-------RELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKRV
        VILPSLQ L    S +D +E    G  + KRL  K           +  +ERE+ECGICLE+ TK+VLP+CCH+MC  CY +W  KS+SCPFCRGS+KRV
Subjt:  VILPSLQRLCDYASQVDSIEDLHKGMTISKRLEHK-------RELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKRV

Query:  ASGDLWVLTCSNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMYYEH
         S DLWVL   NDVVDTRT  +ED+ RFYL+IN+LP D P+ LF++YYE+
Subjt:  ASGDLWVLTCSNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMYYEH

AT1G13195.2 RING/U-box superfamily protein3.5e-5156.65Show/hide
Query:  VDSDGRPYISSYGRKATISEFYSVILPSLQRLCDYASQVDSIEDLHKGMTISKRLEHK-------RELLDLDIEREDECGICLESRTKIVLPHCCHAMCT
        V SDG+P ++++GRKATISEFY VILPSLQ L    S +D +E    G  + KRL  K           +  +ERE+ECGICLE+ TK+VLP+CCH+MC 
Subjt:  VDSDGRPYISSYGRKATISEFYSVILPSLQRLCDYASQVDSIEDLHKGMTISKRLEHK-------RELLDLDIEREDECGICLESRTKIVLPHCCHAMCT

Query:  NCYHDWKSKSESCPFCRGSLKRVASGDLWVLTCSNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMYYEH
         CY +W  KS+SCPFCRGS+KRV S DLWVL   NDVVDTRT  +ED+ RFYL+IN+LP D P+ LF++YYE+
Subjt:  NCYHDWKSKSESCPFCRGSLKRVASGDLWVLTCSNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMYYEH

AT1G24440.1 RING/U-box superfamily protein7.1e-6051.03Show/hide
Query:  SYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKLVDS-----------------------------------DGRPYISSYGRKATISEFYSVILPSL
        SY+D L+ LEADI HAN  AA  P GK G   QMKLV S                                   DGR   S YGRKATI EFY VILPSL
Subjt:  SYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKLVDS-----------------------------------DGRPYISSYGRKATISEFYSVILPSL

Query:  QRL-CDYASQVDSIEDLHKGMTISKR---LEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKRVASGDLWVLT
        +RL  ++A   D          I+K+   +E  R +  +D+EREDECGICLE  TK+VLP+CCHAMC  CY +W +KSESCPFCRGS+KRV S DLWVLT
Subjt:  QRL-CDYASQVDSIEDLHKGMTISKR---LEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKRVASGDLWVLT

Query:  CSNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMYYEHLL
        C  DVVD  T+ KED+LRFYL IN+LP D P+  FL+Y E+L+
Subjt:  CSNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMYYEHLL

AT3G47160.1 RING/U-box superfamily protein1.4e-4240.26Show/hide
Query:  SYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKL---------------------------------VDSDGRPYISSYGRKATISEFYSVILPSLQR
        S+KD L+ LEADI+HAN  A  +PR KDG+  QM+L                                   +DG+  +S Y RK +I +FY+VI PSL +
Subjt:  SYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKL---------------------------------VDSDGRPYISSYGRKATISEFYSVILPSLQR

Query:  LCDYASQVD--SIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKRVASGDLWVLTCSND
        L    + +D    +++ K    +K    K +L ++DIERE+ECGIC+E    +VLP+C H++C  CY DW  +SESCPFCR SLKRV SGDLW+L   +D
Subjt:  LCDYASQVD--SIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKRVASGDLWVLTCSND

Query:  VVDTRTIMKEDMLRFYLFINNLPDDTPDVLF
         V+  TI +E+  R +++I  LP   PD +F
Subjt:  VVDTRTIMKEDMLRFYLFINNLPDDTPDVLF

AT5G58787.1 RING/U-box superfamily protein3.2e-4439.74Show/hide
Query:  SYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKLVDS---------------------------------DGRPYISSYGRKATISEFYSVILPSLQR
        S+KD L+ LEADI+HAN  A  +PR KDG+  QM+L  S                                 DG+  +S Y RKA+I EF +VILPSL +
Subjt:  SYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKLVDS---------------------------------DGRPYISSYGRKATISEFYSVILPSLQR

Query:  LCDYASQVDSIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKRVASGDLWVLTCSNDVV
        L    + +D  +   +   +  R + + E+ +++IERE+ECGIC+E  +K+VLP+C H++C  CY DW+ +S+SCPFCR SLKRV SGDLW+    ND V
Subjt:  LCDYASQVDSIEDLHKGMTISKRLEHKRELLDLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKRVASGDLWVLTCSNDVV

Query:  DTRTIMKEDMLRFYLFINNLPDDTPDVLF
        +   I +E+  R +++I  LP   PD ++
Subjt:  DTRTIMKEDMLRFYLFINNLPDDTPDVLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGATTGTTATCAGAGGCTTTCTTCTGGCCATTCTTACAAAGATTTCCTTGAGTTTCTTGAAGCTGATATTCGCCATGCCAATGCTTTTGCAGCTTCATTTCCAAG
AGGCAAGGATGGTTCATCCTTCCAGATGAAATTAGTAGACTCAGATGGAAGGCCATATATCTCATCCTACGGAAGGAAAGCAACTATAAGCGAATTCTACTCTGTTATAT
TGCCATCCCTACAACGGCTTTGTGATTATGCATCACAGGTAGATAGCATTGAAGATCTCCACAAGGGAATGACGATCTCAAAGAGATTAGAACACAAGAGGGAACTTTTA
GATTTGGACATAGAAAGAGAAGACGAATGTGGGATCTGTTTGGAGTCACGTACCAAAATTGTCTTGCCACATTGTTGTCATGCCATGTGCACAAATTGCTACCATGATTG
GAAATCAAAGTCAGAATCTTGCCCGTTCTGCCGAGGAAGTTTGAAGAGAGTAGCCTCAGGGGATCTGTGGGTTCTCACATGCAGTAACGACGTGGTCGACACTCGTACTA
TCATGAAAGAAGATATGTTACGCTTCTATCTTTTTATAAACAATCTACCTGATGATACACCTGATGTTCTATTCCTAATGTATTATGAACATTTGTTGTAA
mRNA sequenceShow/hide mRNA sequence
TTAACTTCGTGTTTTGCTTTCTAATGCGAGGCAATTTAATGGTCAATGTTTCCGAACAAGGGGCCATGATTTGCCCGATTTGTCTTCAACAAGGACAAAGAAAACCTTTC
TTTATTCATGAAATGAAAGAAACTTATCCAAGTTAGGTGGTCATTTAATCCCTCAACCAACAAAATCAAAAGCAACCCAACAAGCAAGTTTTGGAATTTTCAAAGGTATT
GAGTAATGGGTATTGTTGTATTGAATCAAAGTGGATAGGCAGAATCATTTCATCACAGTCTGTAAGCTAGAGGTTTGAATTTTCAAAGAAATACAGAAGAGAAGACTCAG
TCTCTTCCTCTCACAGTTAAATAATAGGCCATTTCTCCCAGAAAAAAGCCTCTATGGACTGTGGGATACATAAAGAAACAATATTCATATTCTTCTCTTTGATCATATTC
ATCCGTGTGGCTCTTTGGCATTGCATTGACAACAGCAATTTCAAACAGAGAGGATGTTGGATTGTTATCAGAGGCTTTCTTCTGGCCATTCTTACAAAGATTTCCTTGAG
TTTCTTGAAGCTGATATTCGCCATGCCAATGCTTTTGCAGCTTCATTTCCAAGAGGCAAGGATGGTTCATCCTTCCAGATGAAATTAGTAGACTCAGATGGAAGGCCATA
TATCTCATCCTACGGAAGGAAAGCAACTATAAGCGAATTCTACTCTGTTATATTGCCATCCCTACAACGGCTTTGTGATTATGCATCACAGGTAGATAGCATTGAAGATC
TCCACAAGGGAATGACGATCTCAAAGAGATTAGAACACAAGAGGGAACTTTTAGATTTGGACATAGAAAGAGAAGACGAATGTGGGATCTGTTTGGAGTCACGTACCAAA
ATTGTCTTGCCACATTGTTGTCATGCCATGTGCACAAATTGCTACCATGATTGGAAATCAAAGTCAGAATCTTGCCCGTTCTGCCGAGGAAGTTTGAAGAGAGTAGCCTC
AGGGGATCTGTGGGTTCTCACATGCAGTAACGACGTGGTCGACACTCGTACTATCATGAAAGAAGATATGTTACGCTTCTATCTTTTTATAAACAATCTACCTGATGATA
CACCTGATGTTCTATTCCTAATGTATTATGAACATTTGTTGTAATAAACCAAATGATTAGAACATTGTACATTGGAGGACTTTGCTAATTATCCACAAATTTGGAGGGTT
GGTTTTCATTCTGATACCGGCTCTCGTTCTGTTTGTCATGTGGAATGCTGCACGTGTTCGTTTGCAGTAATGCAGTTTGTATATGAGGTTCTCTTCTAACATAATATAAT
AGTTCCTAAGTTTGAGTTCTGTTCTTC
Protein sequenceShow/hide protein sequence
MLDCYQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKLVDSDGRPYISSYGRKATISEFYSVILPSLQRLCDYASQVDSIEDLHKGMTISKRLEHKRELL
DLDIEREDECGICLESRTKIVLPHCCHAMCTNCYHDWKSKSESCPFCRGSLKRVASGDLWVLTCSNDVVDTRTIMKEDMLRFYLFINNLPDDTPDVLFLMYYEHLL