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Lsi02G004980 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G004980
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptioncycloeucalenol cycloisomerase-like
Genome locationchr02:4217425..4220908
RNA-Seq ExpressionLsi02G004980
SyntenyLsi02G004980
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0047793 - cycloeucalenol cycloisomerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY22450.1 Cycloeucalenol cycloisomerase, putative isoform 2, partial [Theobroma cacao]1.5e-0466.67Show/hide
Query:  IGFRVFVSIS---QIDEKPGDLWDLPRVAVDSLGAAMLI
        + F +F+ ++   +IDEKPGDLWDLPRVAVDSLGAAML+
Subjt:  IGFRVFVSIS---QIDEKPGDLWDLPRVAVDSLGAAMLI
KAF2564112.1 hypothetical protein F2Q70_00014506 [Brassica cretica]1.2e-0643.75Show/hide
Query:  LNFVKGNDITTLDMLVYGFNGQIFLNEIVNRHKVVNNCEHYLQFLNTISNRDKFGCNLNDKGQN
        L+ V+ +D+ TLD+LV  F G++  NE+V  H+++NNCEH  + L+T++N ++F CN N K +N
Subjt:  LNFVKGNDITTLDMLVYGFNGQIFLNEIVNRHKVVNNCEHYLQFLNTISNRDKFGCNLNDKGQN
KAG6584146.1 Cycloeucalenol cycloisomerase, partial [Cucurbita argyrosperma subsp. sororia]1.5e-0476.47Show/hide
Query:  FRVFVSISQIDEKPGDLWDLPRVAVDSLGAAMLI
        F  F    +IDEKPGDLWDLPRVAVDSLGAAML+
Subjt:  FRVFVSISQIDEKPGDLWDLPRVAVDSLGAAMLI
TXG51301.1 hypothetical protein EZV62_023825 [Acer yangbiense]1.5e-0475Show/hide
Query:  IGFRVFVSISQIDEKPGDLWDLPRVAVDSLGAAMLI
        + F +FV   +IDEKPGDLWDLPRVAVDSLGAAML+
Subjt:  IGFRVFVSISQIDEKPGDLWDLPRVAVDSLGAAMLI
XP_022923634.1 cycloeucalenol cycloisomerase-like [Cucurbita moschata]1.5e-0476.47Show/hide
Query:  FRVFVSISQIDEKPGDLWDLPRVAVDSLGAAMLI
        F  F    +IDEKPGDLWDLPRVAVDSLGAAML+
Subjt:  FRVFVSISQIDEKPGDLWDLPRVAVDSLGAAMLI
TrEMBL top hitse value%identityAlignment
A0A061FY22 Cycloeucalenol cycloisomerase, putative isoform 2 (Fragment)7.2e-0566.67Show/hide
Query:  IGFRVFVSIS---QIDEKPGDLWDLPRVAVDSLGAAMLI
        + F +F+ ++   +IDEKPGDLWDLPRVAVDSLGAAML+
Subjt:  IGFRVFVSIS---QIDEKPGDLWDLPRVAVDSLGAAMLI
A0A2P2LA07 Translational elongation factor 1 subunit Bbeta3.7e-0954.24Show/hide
Query:  LNFVKGNDITTLDMLVYGFNGQIFLNEIVNRHKVVNNCEHYLQFLNTISNRDKFGCNLN
        L FV+G++IT LD+ +Y F+ QI LN++V+RH+V++N +H LQFL TISNR+K GC ++
Subjt:  LNFVKGNDITTLDMLVYGFNGQIFLNEIVNRHKVVNNCEHYLQFLNTISNRDKFGCNLN
A0A5C7H320 Uncharacterized protein7.2e-0575Show/hide
Query:  IGFRVFVSISQIDEKPGDLWDLPRVAVDSLGAAMLI
        + F +FV   +IDEKPGDLWDLPRVAVDSLGAAML+
Subjt:  IGFRVFVSISQIDEKPGDLWDLPRVAVDSLGAAMLI
A0A6J1E6Z0 cycloeucalenol cycloisomerase-like7.2e-0576.47Show/hide
Query:  FRVFVSISQIDEKPGDLWDLPRVAVDSLGAAMLI
        F  F    +IDEKPGDLWDLPRVAVDSLGAAML+
Subjt:  FRVFVSISQIDEKPGDLWDLPRVAVDSLGAAMLI
A0A6J1KJU7 cycloeucalenol cycloisomerase-like7.2e-0576.47Show/hide
Query:  FRVFVSISQIDEKPGDLWDLPRVAVDSLGAAMLI
        F  F    +IDEKPGDLWDLPRVAVDSLGAAML+
Subjt:  FRVFVSISQIDEKPGDLWDLPRVAVDSLGAAMLI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G50375.1 cyclopropyl isomerase1.6e-0445.45Show/hide
Query:  MACIGFRVFVSIS-----QIDEKPGDLWDLPRVAVDSLGAAMLI
        + C+ + ++  +S     ++DEK  D WDL RVAVD+LGAAML+
Subjt:  MACIGFRVFVSIS-----QIDEKPGDLWDLPRVAVDSLGAAMLI
AT5G50375.2 cyclopropyl isomerase3.5e-0446.51Show/hide
Query:  MACIGFRVFVSIS-----QIDEKPGDLWDLPRVAVDSLGAAML
        + C+ + ++  +S     ++DEK  D WDL RVAVD+LGAAML
Subjt:  MACIGFRVFVSIS-----QIDEKPGDLWDLPRVAVDSLGAAML

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATGGCCTGTATTGGCTTCCGAGTTTTCGTTTCTATCAGTCAGATTGACGAGAAGCCTGGTGATCTTTGGGACTTACCAAGAGTGGCAGTTGATTCTCTAGGAGC
AGCAATGTTGATCATTAAGCCATTAAATTTTGTTAAAGGCAACGATATCACAACTCTGGACATGCTCGTTTATGGGTTCAACGGTCAAATATTCCTCAATGAGATTGTCA
ACCGACACAAGGTCGTCAACAATTGTGAGCATTATCTGCAGTTTCTTAATACCATATCCAACAGGGACAAGTTTGGCTGCAATTTAAATGACAAGGGTCAAAACACATCC
ACGTATGATATAACAATCAATTACATTACACATAGTAAGATAAACAGTAACTGGCATGCTGGAGAAATAAGCATAACATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCATGGCCTGTATTGGCTTCCGAGTTTTCGTTTCTATCAGTCAGATTGACGAGAAGCCTGGTGATCTTTGGGACTTACCAAGAGTGGCAGTTGATTCTCTAGGAGC
AGCAATGTTGATCATTAAGCCATTAAATTTTGTTAAAGGCAACGATATCACAACTCTGGACATGCTCGTTTATGGGTTCAACGGTCAAATATTCCTCAATGAGATTGTCA
ACCGACACAAGGTCGTCAACAATTGTGAGCATTATCTGCAGTTTCTTAATACCATATCCAACAGGGACAAGTTTGGCTGCAATTTAAATGACAAGGGTCAAAACACATCC
ACGTATGATATAACAATCAATTACATTACACATAGTAAGATAAACAGTAACTGGCATGCTGGAGAAATAAGCATAACATCATGA
Protein sequenceShow/hide protein sequence
MAMACIGFRVFVSISQIDEKPGDLWDLPRVAVDSLGAAMLIIKPLNFVKGNDITTLDMLVYGFNGQIFLNEIVNRHKVVNNCEHYLQFLNTISNRDKFGCNLNDKGQNTS
TYDITINYITHSKINSNWHAGEISITS