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Lsi02G005080 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G005080
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:4309173..4311400
RNA-Seq ExpressionLsi02G005080
SyntenyLsi02G005080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN64414.1 hypothetical protein Csa_014210 [Cucumis sativus]5.6e-1452.88Show/hide
Query:  MVTWGFIETSVIFLARLVAISRIEGGFPVVAGSFSSILTFSNFVVLLCALLVKGNGSSVTIFQPFTDPVEKERRSASWR------RDMLTQSEVRNETMA
        M TWGFI+TSVIFLARLVA+SR+EGGFPVVA                      GNGSSVT+ Q FTDP+EKE R           +   +QSEVRN+TM 
Subjt:  MVTWGFIETSVIFLARLVAISRIEGGFPVVAGSFSSILTFSNFVVLLCALLVKGNGSSVTIFQPFTDPVEKERRSASWR------RDMLTQSEVRNETMA

Query:  EIPV
        EIPV
Subjt:  EIPV
TrEMBL top hitse value%identityAlignment
A0A0A0LTV5 Uncharacterized protein2.7e-1452.88Show/hide
Query:  MVTWGFIETSVIFLARLVAISRIEGGFPVVAGSFSSILTFSNFVVLLCALLVKGNGSSVTIFQPFTDPVEKERRSASWR------RDMLTQSEVRNETMA
        M TWGFI+TSVIFLARLVA+SR+EGGFPVVA                      GNGSSVT+ Q FTDP+EKE R           +   +QSEVRN+TM 
Subjt:  MVTWGFIETSVIFLARLVAISRIEGGFPVVAGSFSSILTFSNFVVLLCALLVKGNGSSVTIFQPFTDPVEKERRSASWR------RDMLTQSEVRNETMA

Query:  EIPV
        EIPV
Subjt:  EIPV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGACTTGGGGTTTCATTGAGACATCTGTCATCTTTTTGGCCCGTTTGGTGGCCATAAGTAGAATTGAAGGTGGCTTTCCAGTGGTTGCTGGGTCATTCTCTTCCAT
TTTGACCTTCTCGAACTTTGTTGTTCTCCTCTGTGCTCTTCTTGTTAAAGGAAATGGATCATCCGTCACTATTTTCCAACCATTCACCGACCCCGTTGAAAAAGAAAGAC
GATCAGCATCATGGAGACGAGATATGCTTACTCAAAGTGAAGTTAGGAACGAAACGATGGCTGAGATTCCAGTTTAG
mRNA sequenceShow/hide mRNA sequence
CAGCTGTTCCATATCTGCTGTCTCCATCTTTTTCTAGTTGCTGCAAAGGAAGGTGCCAGGGACTGATTGCATAGTTTCCCTTTAGAGGAGATCAAGTTTTCATCACAAAG
GAACTCCCAAGAATACCACTTTTCGATCATACGATCTGTATCATGCACAACTACATCAGTGGTGTTCCCTTCTCTTGCCATGATAGCAGCACTGTAAATTGTTGCCATTC
TTCCTGGTGCCTGAGGACTATCTCCTCTTGGTCCATCCACGACCACCACATCCCATTTGACTTTATAAACTTCTCTTGGAAGATCTGTCAAGGCAAGTTTGCACTTAGAT
GAATTCCTGAGCCCTGAGTCTGGTGCACATGATTTGTTTTCTCTTGCATGCTTTAACAACTTTTTGTAGGGATCATCCTCAAGAAAAACATTCTTTCCACCGTCATTGAC
TGCTGAGAGGTTAAGGTACTGTGATTCAATCCCAAAGAAAAGGAGATTGCAGGGTGCCTTTTCAGCAATCAGATTTGAGAGAAGCTTGAATTCCTTCTCTGAAATAGCGG
CTTCATTTGCAGAGGTTCTATGATCGTCTGAGAACCTTGATAATGGGGGTTGAAGCTTTGGAGGCAATGCAATTGCTAGAAGTGGAGAAGTATAAGATGTGGTAAATGCA
ATCCTAACGAGTCTGAGAATGGAGAGACTAGACAGAATCAAGACGAGAACAGGTAGGATTTTGTTTCTTGTAAAACTCATGCTTTTGCTTCCTCTGCTGTTTTTGAAGCT
TACTGATGGATATGACTGCTGTGAGGGCGAGATAGAGGGGGGAGGAAGCGTTTCTGATGGCACAAGTGAGTGGCAATCCACCACTTCTGGAGGCATTTTGTTTTACTGTT
GTTCACTTTCAGCCGCATCAGAGCCACCATCTTATTCTTATTTAGAGGAGCACTTTTTGTGGGGGTGTTGCTAGGTGCAAGTTGTTCTGCCTAATCCCCACTTGAGTGTG
GAATAAGAAATGCTTTTGCTTGTTCCCAAAGCATTGCCTTTTTGTATTTTTCACTCGACTGTGCTAATTGTTGTAGTTACATCCTTGCATTTGAGGATTCAAAAGTGGCC
ACTGCAGAGCCTCAAAAGGGTATAAATTTCAAGGAGGTTGGTCATTTCAATCATTGATTTCAGATGGTGACTTGGGGTTTCATTGAGACATCTGTCATCTTTTTGGCCCG
TTTGGTGGCCATAAGTAGAATTGAAGGTGGCTTTCCAGTGGTTGCTGGGTCATTCTCTTCCATTTTGACCTTCTCGAACTTTGTTGTTCTCCTCTGTGCTCTTCTTGTTA
AAGGAAATGGATCATCCGTCACTATTTTCCAACCATTCACCGACCCCGTTGAAAAAGAAAGACGATCAGCATCATGGAGACGAGATATGCTTACTCAAAGTGAAGTTAGG
AACGAAACGATGGCTGAGATTCCAGTTTAGTGGTCATTTTCAAGGGGAAGCTTCGTGGAAAGTACCAAAGCAAAAGATTTAACGATAAAGAGCTGTTTGAAAAGTGACTC
AAAGGGGGAAAAGATTAAATTAGAACATCAACAACATTAACAGTGAGCTGTTGAATGAAGATCAGCCTTTTTTTTTTTTGGTATTATAAATAAAAGTCGTTGTAGAAAAA
GAAAAGAACAAGCAGTGGAAACCCAGGTTTTGTCCTGGACTAAGTCTTCAATCAATTAATAACTAATATTTAATATCAATTTGCAGGTGTAAAAACTTTTAG
Protein sequenceShow/hide protein sequence
MVTWGFIETSVIFLARLVAISRIEGGFPVVAGSFSSILTFSNFVVLLCALLVKGNGSSVTIFQPFTDPVEKERRSASWRRDMLTQSEVRNETMAEIPV