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Lsi02G005170 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G005170
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDUF4408 domain-containing protein
Genome locationchr02:4435204..4437524
RNA-Seq ExpressionLsi02G005170
SyntenyLsi02G005170
Gene Ontology termsGO:0034219 - carbohydrate transmembrane transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0051119 - sugar transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573141.1 hypothetical protein SDJN03_27028, partial [Cucurbita argyrosperma subsp. sororia]7.6e-3147.98Show/hide
Query:  SSKTPILDFLYNFQMDLTEIVTKSSIKSNHSPVNNIIINSLLLCFLTALFCSLLWIISFLLPSSSLLSVFLSSLSQSSNYPINFPTPTCVFILGNLIVVL
        SSK P+        M LT I T+SS+ +N            +LCFL ALF    +I+   LP               SNY INFPTP  VFI+GNLIVV+
Subjt:  SSKTPILDFLYNFQMDLTEIVTKSSIKSNHSPVNNIIINSLLLCFLTALFCSLLWIISFLLPSSSLLSVFLSSLSQSSNYPINFPTPTCVFILGNLIVVL

Query:  LIGESKFFSSKTPDRFGTDVCFYDGSFRETSMSEGDEKRSFESFDEEDEWEMESVNSEELSKRADDFIARVNMQRKDEAMMVAYCCELTTMKKRYKKK
        LIGESK F+SK+ D F  ++CFYDG    T +  GDE R  +   ++DEWEM   N E+LSKRADDFIARVNMQR+ EA ++ +CCEL T K +Y+KK
Subjt:  LIGESKFFSSKTPDRFGTDVCFYDGSFRETSMSEGDEKRSFESFDEEDEWEMESVNSEELSKRADDFIARVNMQRKDEAMMVAYCCELTTMKKRYKKK

KAG7012326.1 hypothetical protein SDJN02_25078, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-3049.46Show/hide
Query:  MDLTEIVTKSSIKSNHSPVNNIIINSLLLCFLTALFCSLLWIISFLLPSSSLLSVFLSSLSQSSNYPINFPTPTCVFILGNLIVVLLIGESKFFSSKTPD
        M LT I T+SS+ +N            +LCFL ALF    +I+   LP               SNY INFPTP  VFI+GNLIVV+LIGESK F+SK+ D
Subjt:  MDLTEIVTKSSIKSNHSPVNNIIINSLLLCFLTALFCSLLWIISFLLPSSSLLSVFLSSLSQSSNYPINFPTPTCVFILGNLIVVLLIGESKFFSSKTPD

Query:  RFGTDVCFYDGSFRETSMSEGDEKRSFESFDEEDEWEMESVNSEELSKRADDFIARVNMQRKDEAMMVAYCCELTTMKKRYKKK
         F  ++CFYDG    T +  GDE R  +   ++DEWEM   N E+LSKRADDFIARVNMQR+ EA ++ +CCEL T K +Y+KK
Subjt:  RFGTDVCFYDGSFRETSMSEGDEKRSFESFDEEDEWEMESVNSEELSKRADDFIARVNMQRKDEAMMVAYCCELTTMKKRYKKK

KGN64433.2 hypothetical protein Csa_013667 [Cucumis sativus]1.2e-5276.79Show/hide
Query:  MDLTEIVTKSSIKSNHSPVNNIIINSLLL-CFLTALFCSLLWIISFLLPSSSLLSVFLSSLSQSSNYPINFPTPTCVFILGNLIVVLLIGESKFFSSKTP
        M LT+I T SS KSNHSPVNNIIIN LLL CFLTA    LLWI    LPSSSL           SNYPINFPTPT VFILGNLIVVLLIGESK FSS TP
Subjt:  MDLTEIVTKSSIKSNHSPVNNIIINSLLL-CFLTALFCSLLWIISFLLPSSSLLSVFLSSLSQSSNYPINFPTPTCVFILGNLIVVLLIGESKFFSSKTP

Query:  DRFGTDVCFYDGSFRETSMSEGDEKRSFESFDEEDEWEMESVNSEELSKRADDFIARVNMQRKDEAMM
        D FG D+CFYDGSFRET +SEGD KR+ ESFDEEDEWE+ESVNSEELSKRADDFIARVNMQRK EAMM
Subjt:  DRFGTDVCFYDGSFRETSMSEGDEKRSFESFDEEDEWEMESVNSEELSKRADDFIARVNMQRKDEAMM

XP_008446247.1 PREDICTED: uncharacterized protein LOC103489033 [Cucumis melo]9.2e-6981.22Show/hide
Query:  IVTKSSIKSNHSPVNNIIINSLLLCFLTALFCSLLWIISFLLPSSSLLSVFLSSLSQSSNYPINFPTPTCVFILGNLIVVLLIGESKFFSSKTPDRFGTD
        I + SS KSNHSPVNNIIIN LLL FLTALF +LLWII  LLPSSSLLS+FLSSLS S NYPINFPTPT VFILGNLIVVLLIGESK FSS TPD FG D
Subjt:  IVTKSSIKSNHSPVNNIIINSLLLCFLTALFCSLLWIISFLLPSSSLLSVFLSSLSQSSNYPINFPTPTCVFILGNLIVVLLIGESKFFSSKTPDRFGTD

Query:  VCFYDGSFRETSMSEGDEKRSFESFDEEDEWEMESVNSEELSKRADDFIARVNMQRKDEAMMVAYCCELTTMKKRYKKKGY
        +CFY GSF ETS+SEGD+KR+ ESFDEEDEWE+ESVNSEELSKRADDFIARVNMQRK EAMMV YCC++ T KKRY+KK Y
Subjt:  VCFYDGSFRETSMSEGDEKRSFESFDEEDEWEMESVNSEELSKRADDFIARVNMQRKDEAMMVAYCCELTTMKKRYKKKGY

XP_011660360.1 uncharacterized protein LOC105436383 [Cucumis sativus]4.1e-6175.94Show/hide
Query:  MDLTEIVTKSSIKSNHSPVNNIIINSLLL-CFLTALFCSLLWIISFLLPSSSLLSVFLSSLSQSSNYPINFPTPTCVFILGNLIVVLLIGESKFFSSKTP
        M LT+I T SS KSNHSPVNNIIIN LLL CFLTA    LLWI    LPSSSL           SNYPINFPTPT VFILGNLIVVLLIGESK FSS TP
Subjt:  MDLTEIVTKSSIKSNHSPVNNIIINSLLL-CFLTALFCSLLWIISFLLPSSSLLSVFLSSLSQSSNYPINFPTPTCVFILGNLIVVLLIGESKFFSSKTP

Query:  DRFGTDVCFYDGSFRETSMSEGDEKRSFESFDEEDEWEMESVNSEELSKRADDFIARVNMQRKDEAMMVAYCCELTTMKKRYKKKGY
        D FG D+CFYDGSFRET +SEGD KR+ ESFDEEDEWE+ESVNSEELSKRADDFIARVNMQRK EAMMV YCC++ TMKKRY KK Y
Subjt:  DRFGTDVCFYDGSFRETSMSEGDEKRSFESFDEEDEWEMESVNSEELSKRADDFIARVNMQRKDEAMMVAYCCELTTMKKRYKKKGY

TrEMBL top hitse value%identityAlignment
A0A0A0LWQ9 Uncharacterized protein2.0e-6175.94Show/hide
Query:  MDLTEIVTKSSIKSNHSPVNNIIINSLLL-CFLTALFCSLLWIISFLLPSSSLLSVFLSSLSQSSNYPINFPTPTCVFILGNLIVVLLIGESKFFSSKTP
        M LT+I T SS KSNHSPVNNIIIN LLL CFLTA    LLWI    LPSSSL           SNYPINFPTPT VFILGNLIVVLLIGESK FSS TP
Subjt:  MDLTEIVTKSSIKSNHSPVNNIIINSLLL-CFLTALFCSLLWIISFLLPSSSLLSVFLSSLSQSSNYPINFPTPTCVFILGNLIVVLLIGESKFFSSKTP

Query:  DRFGTDVCFYDGSFRETSMSEGDEKRSFESFDEEDEWEMESVNSEELSKRADDFIARVNMQRKDEAMMVAYCCELTTMKKRYKKKGY
        D FG D+CFYDGSFRET +SEGD KR+ ESFDEEDEWE+ESVNSEELSKRADDFIARVNMQRK EAMMV YCC++ TMKKRY KK Y
Subjt:  DRFGTDVCFYDGSFRETSMSEGDEKRSFESFDEEDEWEMESVNSEELSKRADDFIARVNMQRKDEAMMVAYCCELTTMKKRYKKKGY

A0A1S3BFF3 uncharacterized protein LOC1034890334.4e-6981.22Show/hide
Query:  IVTKSSIKSNHSPVNNIIINSLLLCFLTALFCSLLWIISFLLPSSSLLSVFLSSLSQSSNYPINFPTPTCVFILGNLIVVLLIGESKFFSSKTPDRFGTD
        I + SS KSNHSPVNNIIIN LLL FLTALF +LLWII  LLPSSSLLS+FLSSLS S NYPINFPTPT VFILGNLIVVLLIGESK FSS TPD FG D
Subjt:  IVTKSSIKSNHSPVNNIIINSLLLCFLTALFCSLLWIISFLLPSSSLLSVFLSSLSQSSNYPINFPTPTCVFILGNLIVVLLIGESKFFSSKTPDRFGTD

Query:  VCFYDGSFRETSMSEGDEKRSFESFDEEDEWEMESVNSEELSKRADDFIARVNMQRKDEAMMVAYCCELTTMKKRYKKKGY
        +CFY GSF ETS+SEGD+KR+ ESFDEEDEWE+ESVNSEELSKRADDFIARVNMQRK EAMMV YCC++ T KKRY+KK Y
Subjt:  VCFYDGSFRETSMSEGDEKRSFESFDEEDEWEMESVNSEELSKRADDFIARVNMQRKDEAMMVAYCCELTTMKKRYKKKGY

A0A5A7UM42 Protoheme IX farnesyltransferase4.4e-6981.22Show/hide
Query:  IVTKSSIKSNHSPVNNIIINSLLLCFLTALFCSLLWIISFLLPSSSLLSVFLSSLSQSSNYPINFPTPTCVFILGNLIVVLLIGESKFFSSKTPDRFGTD
        I + SS KSNHSPVNNIIIN LLL FLTALF +LLWII  LLPSSSLLS+FLSSLS S NYPINFPTPT VFILGNLIVVLLIGESK FSS TPD FG D
Subjt:  IVTKSSIKSNHSPVNNIIINSLLLCFLTALFCSLLWIISFLLPSSSLLSVFLSSLSQSSNYPINFPTPTCVFILGNLIVVLLIGESKFFSSKTPDRFGTD

Query:  VCFYDGSFRETSMSEGDEKRSFESFDEEDEWEMESVNSEELSKRADDFIARVNMQRKDEAMMVAYCCELTTMKKRYKKKGY
        +CFY GSF ETS+SEGD+KR+ ESFDEEDEWE+ESVNSEELSKRADDFIARVNMQRK EAMMV YCC++ T KKRY+KK Y
Subjt:  VCFYDGSFRETSMSEGDEKRSFESFDEEDEWEMESVNSEELSKRADDFIARVNMQRKDEAMMVAYCCELTTMKKRYKKKGY

A0A6J1CA01 uncharacterized protein LOC1110088102.4e-2248.82Show/hide
Query:  VNNIIINSLLLCFLTALFCSLLWIISFLLPSSSLLSVFLSSLSQSSNYPINFPTPTC-VFILGNLIVVLLIGESKFFSSKTPDRF--GTDVCFYDGSFRE
        +NN II+S LL FLTAL   + + ISF +         L  L  SSN      TPT  VF+LGNLIV +L+GESK FS KT D      D C +DGSF E
Subjt:  VNNIIINSLLLCFLTALFCSLLWIISFLLPSSSLLSVFLSSLSQSSNYPINFPTPTC-VFILGNLIVVLLIGESKFFSSKTPDRF--GTDVCFYDGSFRE

Query:  TSMSEGDEKRSFESFDEEDEWEMESV-NSEELSKRADDFIARVNMQRKDEAMMVAYCCELTTMKKRYKKK
         S+ E ++    +  +  DEWEM ++ + EELS+RADDFIARVNMQRK EA +++Y CE TTM K+Y+++
Subjt:  TSMSEGDEKRSFESFDEEDEWEMESV-NSEELSKRADDFIARVNMQRKDEAMMVAYCCELTTMKKRYKKK

A0A7J0H2V4 Uncharacterized protein1.1e-0636.41Show/hide
Query:  MDLTEIVTKSSIKSNHSPVNNIIINSLLLCFLTALFCSLLWIISFLLP-SSSLLSVFLS-SLSQSSNYPINFPTPTCVFILGNLIVVLLIGESKFFSS--
        MD  +IV   +I  N      +++N+LLL  LT L CSL     F  P   S + VFLS SL Q ++    F T    FI+GNLIV+ L+GESK FSS  
Subjt:  MDLTEIVTKSSIKSNHSPVNNIIINSLLLCFLTALFCSLLWIISFLLP-SSSLLSVFLS-SLSQSSNYPINFPTPTCVFILGNLIVVLLIGESKFFSS--

Query:  ---------------KTPDRFGTDVCFYDGSFRETSMSEGDEKRSFESFDEEDEWEMESVNSEELSKRADDFIARVNMQRKDEA
                       K   +FG  +     S   +   E  E    E  DE+++ E   + +EE++KRADDFI+RV  QR+ E+
Subjt:  ---------------KTPDRFGTDVCFYDGSFRETSMSEGDEKRSFESFDEEDEWEMESVNSEELSKRADDFIARVNMQRKDEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCTTCTATGGGTTGGAGACTCCTTTTCTATAACTAGGAATGGTGTTGAGTTCATTGCATTCAAATATGCGTCGCCCAATTTTCCCCCAAGATATGGAAGCCTTAA
TCCCTTCCATCTTCTTCCTTCTTCCAAAACCCCCATATTAGATTTCCTATACAATTTCCAAATGGATCTTACAGAGATCGTAACAAAATCTTCAATAAAATCCAACCATT
CCCCTGTAAATAATATTATCATCAACAGTCTCCTCCTCTGTTTTCTTACAGCTCTGTTTTGTAGTCTCTTATGGATTATTTCCTTTCTCCTCCCTTCTTCCTCTCTTCTC
TCTGTGTTTCTCTCATCTCTCTCTCAATCCTCAAATTACCCAATAAACTTTCCCACACCCACCTGCGTTTTCATCCTCGGTAATCTCATTGTCGTTCTTCTCATCGGAGA
ATCCAAATTTTTTTCCTCAAAAACTCCGGATCGTTTTGGTACTGATGTATGTTTTTACGATGGGAGTTTTCGAGAGACTTCGATGAGTGAAGGGGATGAAAAGAGGAGTT
TTGAGAGCTTTGATGAGGAGGATGAGTGGGAGATGGAATCGGTTAATTCTGAGGAATTGAGTAAAAGAGCTGATGATTTTATTGCCAGAGTCAATATGCAGAGGAAGGAT
GAAGCTATGATGGTTGCGTATTGTTGTGAATTGACGACGATGAAGAAAAGATATAAAAAGAAAGGCTATAACTATAAGCCTTTTAGTATTTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCTTCTATGGGTTGGAGACTCCTTTTCTATAACTAGGAATGGTGTTGAGTTCATTGCATTCAAATATGCGTCGCCCAATTTTCCCCCAAGATATGGAAGCCTTAA
TCCCTTCCATCTTCTTCCTTCTTCCAAAACCCCCATATTAGATTTCCTATACAATTTCCAAATGGATCTTACAGAGATCGTAACAAAATCTTCAATAAAATCCAACCATT
CCCCTGTAAATAATATTATCATCAACAGTCTCCTCCTCTGTTTTCTTACAGCTCTGTTTTGTAGTCTCTTATGGATTATTTCCTTTCTCCTCCCTTCTTCCTCTCTTCTC
TCTGTGTTTCTCTCATCTCTCTCTCAATCCTCAAATTACCCAATAAACTTTCCCACACCCACCTGCGTTTTCATCCTCGGTAATCTCATTGTCGTTCTTCTCATCGGAGA
ATCCAAATTTTTTTCCTCAAAAACTCCGGATCGTTTTGGTACTGATGTATGTTTTTACGATGGGAGTTTTCGAGAGACTTCGATGAGTGAAGGGGATGAAAAGAGGAGTT
TTGAGAGCTTTGATGAGGAGGATGAGTGGGAGATGGAATCGGTTAATTCTGAGGAATTGAGTAAAAGAGCTGATGATTTTATTGCCAGAGTCAATATGCAGAGGAAGGAT
GAAGCTATGATGGTTGCGTATTGTTGTGAATTGACGACGATGAAGAAAAGATATAAAAAGAAAGGCTATAACTATAAGCCTTTTAGTATTTATTAG
Protein sequenceShow/hide protein sequence
MDLLWVGDSFSITRNGVEFIAFKYASPNFPPRYGSLNPFHLLPSSKTPILDFLYNFQMDLTEIVTKSSIKSNHSPVNNIIINSLLLCFLTALFCSLLWIISFLLPSSSLL
SVFLSSLSQSSNYPINFPTPTCVFILGNLIVVLLIGESKFFSSKTPDRFGTDVCFYDGSFRETSMSEGDEKRSFESFDEEDEWEMESVNSEELSKRADDFIARVNMQRKD
EAMMVAYCCELTTMKKRYKKKGYNYKPFSIY