; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G005350 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G005350
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionpentatricopeptide repeat-containing protein At3g22470, mitochondrial-like
Genome locationchr02:4652468..4653238
RNA-Seq ExpressionLsi02G005350
SyntenyLsi02G005350
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584178.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]6.9e-10480.69Show/hide
Query:  MKTIRQQLLPLHRLPLPPELLHYQIAFIHSLFSSSSSSSISDSASASIATKPNTTLTQDELTKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPLS
        MKT+RQ+LL LHRLPLPP+L+H QI  I + FSSSSSSS   S   S A+K NTTLTQDELTKI+LLLPRLC YNHHSTAITLLD  LLTN SLQSLPLS
Subjt:  MKTIRQQLLPLHRLPLPPELLHYQIAFIHSLFSSSSSSSISDSASASIATKPNTTLTQDELTKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPLS

Query:  ILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSN
        ILSHSLASQS FALTMSLLTRL HHRNALLYS+PIITMLI SY ++RK KEALKIFHWMLRPGSPCKPDERVYKTLIAGLC+KGM LDALK+L+NMIDSN
Subjt:  ILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSN

Query:  LVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHL---SELLDRIINNWID
        LVPD DLR+WVFRCLLREAMIGEAT+LSE LNS+GD+N+S HL   SELLDRII NWI+
Subjt:  LVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHL---SELLDRIINNWID

KAG7019769.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]6.9e-10480.77Show/hide
Query:  MKTIRQQLLPLHRLPLPPELLHYQIAFIHSLFS-SSSSSSISDSASASIATKPNTTLTQDELTKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPL
        MKTI Q+LLPLHRLPLPP+L+H QI  I + FS SSSSSS+ DSA    A+K NTTLTQDELTKI+LLLPRLC YNHHSTAITLLD  LLTN SLQSLPL
Subjt:  MKTIRQQLLPLHRLPLPPELLHYQIAFIHSLFS-SSSSSSISDSASASIATKPNTTLTQDELTKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPL

Query:  SILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDS
        SILSHSLASQS FALTMSLLTRL HHRNALLYS+PIITMLI SY ++RK KEALKIFHWMLRPGSPCKPDERVYKTLIAGLC+KGM LDALK+L+NMIDS
Subjt:  SILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDS

Query:  NLVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHL---SELLDRIINNWID
        NLVPD DLR+WVFRCLLREAMIG+AT+LSE LNS+GD+N+S HL   SELLDRII NWI+
Subjt:  NLVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHL---SELLDRIINNWID

XP_022923926.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucurbita moschata]6.9e-10481.15Show/hide
Query:  MKTIRQQLLPLHRLPLPPELLHYQIAFIHSLFS-SSSSSSISDSASASIATKPNTTLTQDELTKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPL
        MKTI Q+LLPLHRLPLPP+L+H QI  I + FS  SSSSS+ DSA    A+K NTTLTQDELTKI+LLLPRLC YNHHSTAITLLD  LLTN SLQSLPL
Subjt:  MKTIRQQLLPLHRLPLPPELLHYQIAFIHSLFS-SSSSSSISDSASASIATKPNTTLTQDELTKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPL

Query:  SILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDS
        SILSHSLASQS FALTMSLLTRL HHRNALLYS+PIITMLI SY K+RK KEALKIFHWMLRPGSPCKPDERVYKTLIAGLC+KGM LDALK+L+NMIDS
Subjt:  SILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDS

Query:  NLVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHL---SELLDRIINNWID
        NLVPD DLR+WVFRCLLREAMIGEAT+LSE LNS+GD+N+S HL   SELLD IINNWI+
Subjt:  NLVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHL---SELLDRIINNWID

XP_023520260.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucurbita pepo subsp. pepo]2.7e-10883.4Show/hide
Query:  MKTIRQQLLPLHRLPLPPELLHYQIAFIHSLFSSSSSSSISDSASASIATKPNTTLTQDELTKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPLS
        MKTIRQ+LLPLHR PLPP+L+H QI  I + FSSSSSSS+ DSA    A+K NTTLTQDELTKI+LLLPRLCL NHHSTAITLLDA LLTN SLQSLPLS
Subjt:  MKTIRQQLLPLHRLPLPPELLHYQIAFIHSLFSSSSSSSISDSASASIATKPNTTLTQDELTKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPLS

Query:  ILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSN
        ILSHSLASQS FALTMSLLTRLNHHRNALLYS+PIITMLIFSYCK+RK KEALKIFHWMLRPGSPCKPDERVYKTLIAGLC+KGM LDALK+L+NMIDSN
Subjt:  ILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSN

Query:  LVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHL---SELLDRIINNWID
        LVPD DLR+WVFRCLLREAMIGEAT+LSE LNS+GD+N+S HL   SELLD IINNWI+
Subjt:  LVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHL---SELLDRIINNWID

XP_038876976.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benincasa hispida]5.8e-11185.88Show/hide
Query:  MKTIRQQLLPLHRLPLPPELLHYQIAFIHSLFSSSSSSSISDS--ASASIATKPNTTLTQDEL-TKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSL
        MK IRQ+LLPLHRLPLPP+LL YQI  I S  SSSSSSSISDS  ASASIA++PNTTLT DEL TKINLLLPRLC YNHHSTAI LLDATLLTNPSLQSL
Subjt:  MKTIRQQLLPLHRLPLPPELLHYQIAFIHSLFSSSSSSSISDS--ASASIATKPNTTLTQDEL-TKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSL

Query:  PLSILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMI
        PLSILSHSLASQS FALTMSLLTRLNHHRNALLYSTPIITMLIFSY KRRK K+ALKIFHWMLRPGSPCKPDERVY TLIAGLC+KGMTLDALKVLRNM+
Subjt:  PLSILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMI

Query:  DSNLVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHL---SELLDRIINNWID
        +SNLVPDCDLRNWVFRCLLREAMIGEA +L+E LN VGD+N+S HL   SELLDRII NWID
Subjt:  DSNLVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHL---SELLDRIINNWID

TrEMBL top hitse value%identityAlignment
A0A0A0LRQ9 Uncharacterized protein2.0e-10180.31Show/hide
Query:  MKTIRQQLLPLHRLPLPPELLHYQIAFIHSLFSSSSSSSISDSASASIATKPNTTLTQDELTKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPLS
        MK IRQQLL L RLPL PELL +QI  I S F SSSSS ISDS SASIATKPNTTLT DELT+INLLLPRLCL+NH STAI+LL ATLLTNPSL SL LS
Subjt:  MKTIRQQLLPLHRLPLPPELLHYQIAFIHSLFSSSSSSSISDSASASIATKPNTTLTQDELTKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPLS

Query:  ILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSN
        +LSHSLASQS FALTMSLLTRL HH NALLYSTPI+TMLI SYCKRRK KEALK+FHWMLRPGSPCKP+ERVYKTLIAGL +KGMT DALKVLRNMIDSN
Subjt:  ILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSN

Query:  LVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHL---SELLDRIINNWID
        LVPDCDLRNWVFR LL+EAMI EA + ++ALN VGD+N+  HL   SELL+RII NWID
Subjt:  LVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHL---SELLDRIINNWID

A0A5A7UP05 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X23.9e-9781.89Show/hide
Query:  MKTIRQQLLPLHRLPLPPELLHYQIAFIHSLFSSSSSSSISDSASASIATKPNTTLTQDELTKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPLS
        MK IRQQLL L RLPL PELL +QI  I S F SSSSS IS S SASIAT+PNTTLT DELT+INLLLPRLCLYNH STAITLL ATLLTNPSLQSL LS
Subjt:  MKTIRQQLLPLHRLPLPPELLHYQIAFIHSLFSSSSSSSISDSASASIATKPNTTLTQDELTKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPLS

Query:  ILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSN
        +LSHSLASQS FALTMSLLTRL HH NALLYSTPI+TMLI SYCKRRK KEALKIFHWMLRPGSPCKP+ERVYKTLIAGL +KGMT DALKVLRNMIDSN
Subjt:  ILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSN

Query:  LVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHL
        LVPDCDLRNWVFRCLLREAMI EA + +E  N VGD+++  HL
Subjt:  LVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHL

A0A5D3BHR6 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X13.9e-9781.89Show/hide
Query:  MKTIRQQLLPLHRLPLPPELLHYQIAFIHSLFSSSSSSSISDSASASIATKPNTTLTQDELTKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPLS
        MK IRQQLL L RLPL PELL +QI  I S F SSSSS IS S SASIAT+PNTTLT DELT+INLLLPRLCLYNH STAITLL ATLLTNPSLQSL LS
Subjt:  MKTIRQQLLPLHRLPLPPELLHYQIAFIHSLFSSSSSSSISDSASASIATKPNTTLTQDELTKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPLS

Query:  ILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSN
        +LSHSLASQS FALTMSLLTRL HH NALLYSTPI+TMLI SYCKRRK KEALKIFHWMLRPGSPCKP+ERVYKTLIAGL +KGMT DALKVLRNMIDSN
Subjt:  ILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSN

Query:  LVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHL
        LVPDCDLRNWVFRCLLREAMI EA + +E  N VGD+++  HL
Subjt:  LVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHL

A0A6J1E820 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like3.3e-10481.15Show/hide
Query:  MKTIRQQLLPLHRLPLPPELLHYQIAFIHSLFS-SSSSSSISDSASASIATKPNTTLTQDELTKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPL
        MKTI Q+LLPLHRLPLPP+L+H QI  I + FS  SSSSS+ DSA    A+K NTTLTQDELTKI+LLLPRLC YNHHSTAITLLD  LLTN SLQSLPL
Subjt:  MKTIRQQLLPLHRLPLPPELLHYQIAFIHSLFS-SSSSSSISDSASASIATKPNTTLTQDELTKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPL

Query:  SILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDS
        SILSHSLASQS FALTMSLLTRL HHRNALLYS+PIITMLI SY K+RK KEALKIFHWMLRPGSPCKPDERVYKTLIAGLC+KGM LDALK+L+NMIDS
Subjt:  SILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDS

Query:  NLVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHL---SELLDRIINNWID
        NLVPD DLR+WVFRCLLREAMIGEAT+LSE LNS+GD+N+S HL   SELLD IINNWI+
Subjt:  NLVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHL---SELLDRIINNWID

A0A6J1KEJ7 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like2.2e-10380.69Show/hide
Query:  MKTIRQQLLPLHRLPLPPELLHYQIAFIHSLFSSSSSSSISDSASASIATKPNTTLTQDELTKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPLS
        MKTIRQ+LLPL RLPLPP+L+H QI  I + FSSSSSSS   S   S A+K NTTLTQDELTKI+LLLPRLCLYNHHSTAITLLD  LLTN SLQSLPLS
Subjt:  MKTIRQQLLPLHRLPLPPELLHYQIAFIHSLFSSSSSSSISDSASASIATKPNTTLTQDELTKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPLS

Query:  ILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSN
        ILSHSLASQS FALTMSLLTRL HHRNALLYS+PIITMLIFSY K+RK KEALKIFHWMLRPGSPCKPDE VYKTLIAGLC+KGM LDALK+L+NMIDSN
Subjt:  ILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSN

Query:  LVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHL---SELLDRIINNWID
        LVPD DLR+WV  CLLREAMIGEAT+LSE LNS+ D+N S HL   SELLDR+INNWI+
Subjt:  LVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHL---SELLDRIINNWID

SwissProt top hitse value%identityAlignment
O49436 Pentatricopeptide repeat-containing protein At4g200904.7e-0725.13Show/hide
Query:  NLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPLSILSHSLASQSHFALTMSLLTRL---NHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLR
        N L+  LCL      A++LL+  + +      +    L + L  Q      + LL+ +    +H N  +YS     +LI    K  K +EA+ ++  M  
Subjt:  NLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPLSILSHSLASQSHFALTMSLLTRL---NHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLR

Query:  PGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSNLVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHLSELLD
         G  CKP+  VY  L+ GLC++G   +A ++L  MI S  +P+    + + +   +  +  EA ++ + ++  G   +    S L+D
Subjt:  PGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSNLVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHLSELLD

P0C7Q7 Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial6.2e-0729.27Show/hide
Query:  TMLIFSYCKRRKPKEALKIFHWMLRPGSPC---KPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSNLVPDCDLRNWVFRCLLREAMIGEATKLSEALNS
        T +I   CK  K ++A     W L    PC   KP+   Y  +I+GLCKKG   +A  +LR M +    P+    N + R  LR+  +  + KL E + S
Subjt:  TMLIFSYCKRRKPKEALKIFHWMLRPGSPC---KPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSNLVPDCDLRNWVFRCLLREAMIGEATKLSEALNS

Query:  VGDKNSSAHLSELLDRIINNWID
         G    ++ +  ++D +++  +D
Subjt:  VGDKNSSAHLSELLDRIINNWID

Q9FMF6 Pentatricopeptide repeat-containing protein At5g64320, mitochondrial4.3e-0839.33Show/hide
Query:  LIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSNLVPDCDLRNWVFRCLLREAMIGEATKL
        LI ++CK  +  EA++IF  M R G  CKPD   + +LI+GLC+      AL +LR+MI   +V +    N +    LR   I EA KL
Subjt:  LIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSNLVPDCDLRNWVFRCLLREAMIGEATKL

Q9FND8 Pentatricopeptide repeat-containing protein At5g404001.8e-0629.01Show/hide
Query:  SILSHSLASQSHFALTMSLLTRLNH---HRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNM
        +IL++   + S+F      L ++       + + Y+T     L+ SYC+R + KEA  ++  M R      PD   Y +LI GLCK G   +A +    M
Subjt:  SILSHSLASQSHFALTMSLLTRLNH---HRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNM

Query:  IDSNLVPDCDLRNWVFRCLLREAMIGEATKL
        +D  + PDC   N +     +E M+ ++ KL
Subjt:  IDSNLVPDCDLRNWVFRCLLREAMIGEATKL

Q9T0D6 Pentatricopeptide repeat-containing protein At4g116903.6e-0725.91Show/hide
Query:  LTKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPLSILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWML
        L   N+L+   C     S A  ++            +  +IL  + A   +    + L  RL+     L+      ++LI  +C + +  EA ++F  M+
Subjt:  LTKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPLSILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWML

Query:  RPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSNLVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHLSELLDRIINN
             C+P+E +Y T+I G CK+G +  ALK+L+ M +  L P+     ++   L +E    EA +L E +   G   S++ LS L+ R  N+
Subjt:  RPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSNLVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHLSELLDRIINN

Arabidopsis top hitse value%identityAlignment
AT3G22470.1 Pentatricopeptide repeat (PPR) superfamily protein1.7e-0726.46Show/hide
Query:  ELTKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPLSILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWM
        +L  ++ L+  LCL    S A+ L+D  +        +    + + L    + AL + L  ++   RN +  S    +++I S CK     +AL +F+ M
Subjt:  ELTKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPLSILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWM

Query:  LRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSNLVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHLSELLD
           G   K D   Y +LI GLC  G   D  K+LR MI  N++PD    + +    ++E  + EA +L   + + G    +   + L+D
Subjt:  LRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSNLVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHLSELLD

AT4G11690.1 Pentatricopeptide repeat (PPR-like) superfamily protein2.6e-0825.91Show/hide
Query:  LTKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPLSILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWML
        L   N+L+   C     S A  ++            +  +IL  + A   +    + L  RL+     L+      ++LI  +C + +  EA ++F  M+
Subjt:  LTKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPLSILSHSLASQSHFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWML

Query:  RPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSNLVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHLSELLDRIINN
             C+P+E +Y T+I G CK+G +  ALK+L+ M +  L P+     ++   L +E    EA +L E +   G   S++ LS L+ R  N+
Subjt:  RPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSNLVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHLSELLDRIINN

AT4G20090.1 Pentatricopeptide repeat (PPR) superfamily protein3.4e-0825.13Show/hide
Query:  NLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPLSILSHSLASQSHFALTMSLLTRL---NHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLR
        N L+  LCL      A++LL+  + +      +    L + L  Q      + LL+ +    +H N  +YS     +LI    K  K +EA+ ++  M  
Subjt:  NLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPLSILSHSLASQSHFALTMSLLTRL---NHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLR

Query:  PGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSNLVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHLSELLD
         G  CKP+  VY  L+ GLC++G   +A ++L  MI S  +P+    + + +   +  +  EA ++ + ++  G   +    S L+D
Subjt:  PGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSNLVPDCDLRNWVFRCLLREAMIGEATKLSEALNSVGDKNSSAHLSELLD

AT5G40400.1 Pentatricopeptide repeat (PPR) superfamily protein1.3e-0729.01Show/hide
Query:  SILSHSLASQSHFALTMSLLTRLNH---HRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNM
        +IL++   + S+F      L ++       + + Y+T     L+ SYC+R + KEA  ++  M R      PD   Y +LI GLCK G   +A +    M
Subjt:  SILSHSLASQSHFALTMSLLTRLNH---HRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNM

Query:  IDSNLVPDCDLRNWVFRCLLREAMIGEATKL
        +D  + PDC   N +     +E M+ ++ KL
Subjt:  IDSNLVPDCDLRNWVFRCLLREAMIGEATKL

AT5G64320.1 Pentatricopeptide repeat (PPR) superfamily protein3.0e-0939.33Show/hide
Query:  LIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSNLVPDCDLRNWVFRCLLREAMIGEATKL
        LI ++CK  +  EA++IF  M R G  CKPD   + +LI+GLC+      AL +LR+MI   +V +    N +    LR   I EA KL
Subjt:  LIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSNLVPDCDLRNWVFRCLLREAMIGEATKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACAATAAGGCAACAGCTTCTTCCCCTACACCGTCTTCCACTTCCACCAGAGCTCCTCCACTATCAAATTGCCTTCATTCATTCTCTATTTTCTTCTTCTTCCTC
CTCCTCCATTTCCGATTCTGCTTCAGCTTCCATAGCTACCAAACCCAATACGACTCTGACCCAAGACGAGCTTACAAAGATCAACCTCCTCCTTCCTCGTCTCTGTCTCT
ACAACCACCACTCTACTGCAATCACACTTCTCGACGCCACTCTCCTCACAAATCCTTCACTTCAATCTCTTCCCCTTTCAATTCTTTCCCATTCCCTTGCTTCCCAATCC
CATTTTGCCCTCACAATGTCCCTCCTCACTCGTCTCAACCACCATCGGAATGCTCTTCTCTATTCAACCCCTATCATCACCATGCTTATTTTCTCTTATTGTAAGCGCCG
GAAACCCAAGGAAGCCTTGAAGATTTTCCATTGGATGCTAAGACCGGGGTCGCCATGTAAGCCGGATGAGAGGGTTTATAAAACCCTAATTGCGGGACTTTGTAAGAAGG
GGATGACACTTGATGCCTTGAAGGTTCTCAGGAACATGATTGATTCGAATTTGGTTCCGGATTGCGATTTGAGGAATTGGGTTTTTAGGTGTTTGCTGAGAGAAGCGATG
ATCGGCGAAGCAACGAAGTTAAGCGAGGCTTTGAATTCCGTTGGCGATAAGAATAGCAGTGCCCATCTGTCGGAATTGTTGGATCGTATCATCAACAATTGGATCGACTA
G
mRNA sequenceShow/hide mRNA sequence
ATGAAAACAATAAGGCAACAGCTTCTTCCCCTACACCGTCTTCCACTTCCACCAGAGCTCCTCCACTATCAAATTGCCTTCATTCATTCTCTATTTTCTTCTTCTTCCTC
CTCCTCCATTTCCGATTCTGCTTCAGCTTCCATAGCTACCAAACCCAATACGACTCTGACCCAAGACGAGCTTACAAAGATCAACCTCCTCCTTCCTCGTCTCTGTCTCT
ACAACCACCACTCTACTGCAATCACACTTCTCGACGCCACTCTCCTCACAAATCCTTCACTTCAATCTCTTCCCCTTTCAATTCTTTCCCATTCCCTTGCTTCCCAATCC
CATTTTGCCCTCACAATGTCCCTCCTCACTCGTCTCAACCACCATCGGAATGCTCTTCTCTATTCAACCCCTATCATCACCATGCTTATTTTCTCTTATTGTAAGCGCCG
GAAACCCAAGGAAGCCTTGAAGATTTTCCATTGGATGCTAAGACCGGGGTCGCCATGTAAGCCGGATGAGAGGGTTTATAAAACCCTAATTGCGGGACTTTGTAAGAAGG
GGATGACACTTGATGCCTTGAAGGTTCTCAGGAACATGATTGATTCGAATTTGGTTCCGGATTGCGATTTGAGGAATTGGGTTTTTAGGTGTTTGCTGAGAGAAGCGATG
ATCGGCGAAGCAACGAAGTTAAGCGAGGCTTTGAATTCCGTTGGCGATAAGAATAGCAGTGCCCATCTGTCGGAATTGTTGGATCGTATCATCAACAATTGGATCGACTA
G
Protein sequenceShow/hide protein sequence
MKTIRQQLLPLHRLPLPPELLHYQIAFIHSLFSSSSSSSISDSASASIATKPNTTLTQDELTKINLLLPRLCLYNHHSTAITLLDATLLTNPSLQSLPLSILSHSLASQS
HFALTMSLLTRLNHHRNALLYSTPIITMLIFSYCKRRKPKEALKIFHWMLRPGSPCKPDERVYKTLIAGLCKKGMTLDALKVLRNMIDSNLVPDCDLRNWVFRCLLREAM
IGEATKLSEALNSVGDKNSSAHLSELLDRIINNWID