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Lsi02G005400 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G005400
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein UNUSUAL FLORAL ORGANS-like
Genome locationchr02:4692160..4692618
RNA-Seq ExpressionLsi02G005400
SyntenyLsi02G005400
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009909 - regulation of flower development (biological process)
GO:0010074 - maintenance of meristem identity (biological process)
GO:0010193 - response to ozone (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0030154 - cell differentiation (biological process)
GO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0042127 - regulation of cell population proliferation (biological process)
GO:1901342 - regulation of vasculature development (biological process)
GO:0000151 - ubiquitin ligase complex (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055370.1 protein UNUSUAL FLORAL ORGANS-like [Cucumis melo var. makuwa]1.0e-6786.84Show/hide
Query:  MNFSHHMDMSLHSSMSSSLPFGYNIISGSNCGIISTCSTTTSSSSNNVALL-TTGPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYA
        MNFSHHMDMSLH SM+ ++PF YNII  SNCGIIST      +S+NNVALL TTGPRMD RIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYA
Subjt:  MNFSHHMDMSLHSSMSSSLPFGYNIISGSNCGIISTCSTTTSSSSNNVALL-TTGPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYA

Query:  SFLELYLQISPHRRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGYM
        SFLELYLQISP+RRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGY+
Subjt:  SFLELYLQISPHRRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGYM

KAG7019775.1 Protein UNUSUAL FLORAL ORGANS, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-5575.97Show/hide
Query:  MNFSHHMDMSLHSSMSSSLPFGYNIISGSNCGII---STCSTTTSSSSNNVALLTTGPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLF
        MNFSH MD++LHSSM   LPF YN  S SNC I+   ST S+++SSSS+N  LL +GP MD+RIWSKLPQ++LDRVVAFLPPPAFFRARCVCKRWYGLLF
Subjt:  MNFSHHMDMSLHSSMSSSLPFGYNIISGSNCGII---STCSTTTSSSSNNVALLTTGPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLF

Query:  YASFLELYLQISPHRRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGYM
        YA+FLE YLQ+SPHRRHWFLFFKLKG+SSHIYRNN NSPL GP  SRPTYEGY+
Subjt:  YASFLELYLQISPHRRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGYM

XP_004145206.2 protein UNUSUAL FLORAL ORGANS [Cucumis sativus]5.9e-7188.74Show/hide
Query:  MNFSHHMDMSLHSSMSSSLPFGYNIISGSNCGIISTCSTTTSSSSNNVALLTTGPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYAS
        MNFSHHMDMSLHSSM+ ++PF YNIIS SNCGIIS     T+S++NNVALLTTGPRMDSRIWSKLPQRILDR+VAFLPPPAFFRARCVCKRWYGLLFYAS
Subjt:  MNFSHHMDMSLHSSMSSSLPFGYNIISGSNCGIISTCSTTTSSSSNNVALLTTGPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYAS

Query:  FLELYLQISPHRRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGYM
        FLELYLQISP+RRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGY+
Subjt:  FLELYLQISPHRRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGYM

XP_008440352.1 PREDICTED: LOW QUALITY PROTEIN: protein UNUSUAL FLORAL ORGANS-like [Cucumis melo]1.8e-6786.84Show/hide
Query:  MNFSHHMDMSLHSSMSSSLPFGYNIISGSNCGIISTCSTTTSSSSNNVALL-TTGPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYA
        MNFSHHMDMSLH SM+ ++PF YNII  SNCGIIST      +S+NNVALL TTGPRMD RIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYA
Subjt:  MNFSHHMDMSLHSSMSSSLPFGYNIISGSNCGIISTCSTTTSSSSNNVALL-TTGPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYA

Query:  SFLELYLQISPHRRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGYM
        SFLELYLQISP+RRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGY+
Subjt:  SFLELYLQISPHRRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGYM

XP_038876989.1 protein UNUSUAL FLORAL ORGANS [Benincasa hispida]8.3e-7390.73Show/hide
Query:  MNFSHHMDMSLHSSMSSSLPFGYNIISGSNCGIISTCSTTTSSSSNNVALLTTGPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYAS
        MNF+HHMDMSLHSSMS++LPF YNIISGSNCGIISTCST     SNNV LLT GPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYAS
Subjt:  MNFSHHMDMSLHSSMSSSLPFGYNIISGSNCGIISTCSTTTSSSSNNVALLTTGPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYAS

Query:  FLELYLQISPHRRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGYM
        FLELYLQ+SPHRRHWFLFFKLKGVSSHIYRNN+NSPLAGPDHSRPTYEGY+
Subjt:  FLELYLQISPHRRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGYM

TrEMBL top hitse value%identityAlignment
A0A0A0LU03 F-box domain-containing protein2.9e-7188.74Show/hide
Query:  MNFSHHMDMSLHSSMSSSLPFGYNIISGSNCGIISTCSTTTSSSSNNVALLTTGPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYAS
        MNFSHHMDMSLHSSM+ ++PF YNIIS SNCGIIS     T+S++NNVALLTTGPRMDSRIWSKLPQRILDR+VAFLPPPAFFRARCVCKRWYGLLFYAS
Subjt:  MNFSHHMDMSLHSSMSSSLPFGYNIISGSNCGIISTCSTTTSSSSNNVALLTTGPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYAS

Query:  FLELYLQISPHRRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGYM
        FLELYLQISP+RRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGY+
Subjt:  FLELYLQISPHRRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGYM

A0A1S3B0Y7 LOW QUALITY PROTEIN: protein UNUSUAL FLORAL ORGANS-like8.6e-6886.84Show/hide
Query:  MNFSHHMDMSLHSSMSSSLPFGYNIISGSNCGIISTCSTTTSSSSNNVALL-TTGPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYA
        MNFSHHMDMSLH SM+ ++PF YNII  SNCGIIST      +S+NNVALL TTGPRMD RIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYA
Subjt:  MNFSHHMDMSLHSSMSSSLPFGYNIISGSNCGIISTCSTTTSSSSNNVALL-TTGPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYA

Query:  SFLELYLQISPHRRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGYM
        SFLELYLQISP+RRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGY+
Subjt:  SFLELYLQISPHRRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGYM

A0A5A7UJK7 Protein UNUSUAL FLORAL ORGANS-like5.1e-6886.84Show/hide
Query:  MNFSHHMDMSLHSSMSSSLPFGYNIISGSNCGIISTCSTTTSSSSNNVALL-TTGPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYA
        MNFSHHMDMSLH SM+ ++PF YNII  SNCGIIST      +S+NNVALL TTGPRMD RIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYA
Subjt:  MNFSHHMDMSLHSSMSSSLPFGYNIISGSNCGIISTCSTTTSSSSNNVALL-TTGPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYA

Query:  SFLELYLQISPHRRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGYM
        SFLELYLQISP+RRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGY+
Subjt:  SFLELYLQISPHRRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGYM

A0A5D3BJJ6 Protein UNUSUAL FLORAL ORGANS-like8.6e-6886.84Show/hide
Query:  MNFSHHMDMSLHSSMSSSLPFGYNIISGSNCGIISTCSTTTSSSSNNVALL-TTGPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYA
        MNFSHHMDMSLH SM+ ++PF YNII  SNCGIIST      +S+NNVALL TTGPRMD RIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYA
Subjt:  MNFSHHMDMSLHSSMSSSLPFGYNIISGSNCGIISTCSTTTSSSSNNVALL-TTGPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYA

Query:  SFLELYLQISPHRRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGYM
        SFLELYLQISP+RRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGY+
Subjt:  SFLELYLQISPHRRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGYM

A0A6J1KQB0 protein UNUSUAL FLORAL ORGANS-like2.7e-5376.71Show/hide
Query:  MDMSLHSSMSSSLPFGYNIISGSNCGIISTCST-TTSSSSNNVALLTTGPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYASFLELY
        MD++LHSSM   LPF YN  S SNC I+S CST ++SSSS++ A L +GP MD+RIWSKLPQ++LDRVVAFLPPPAFFRARCVCKRWYGLLFYA+FLE Y
Subjt:  MDMSLHSSMSSSLPFGYNIISGSNCGIISTCST-TTSSSSNNVALLTTGPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYASFLELY

Query:  LQISPHRRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGYM
        LQ+SPHRRHWFLFFKLKG+SSHIYRNN NSPL GP  SRPTYEGY+
Subjt:  LQISPHRRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGYM

SwissProt top hitse value%identityAlignment
B8B183 Protein ABERRANT PANICLE ORGANIZATION 19.4e-1152.73Show/hide
Query:  MDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYASFLELYLQISPH
        MD R+W +LPQ ++DRV+A LP P+F R R  C+R+Y LLF + FL  +L +SPH
Subjt:  MDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYASFLELYLQISPH

Q39090 Protein UNUSUAL FLORAL ORGANS3.5e-2655.83Show/hide
Query:  SSSLPFGYNIISGSNCGIISTCSTTTSSSSNNVALLTTGPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYASFLELYLQISPHRRHW
        S +LPF Y   S SN    +T STTT SSS        G  MD RIWSKLP  +LDRV+AFLPPPAFFR RCVCKR+Y LLF  +FLE YLQ+ P R + 
Subjt:  SSSLPFGYNIISGSNCGIISTCSTTTSSSSNNVALLTTGPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYASFLELYLQISPHRRHW

Query:  FLFFKLKGVSSHIYRNNNNS
        FLFFK K + S+IY+    +
Subjt:  FLFFKLKGVSSHIYRNNNNS

Q655Y0 Protein ABERRANT PANICLE ORGANIZATION 11.2e-1050.91Show/hide
Query:  MDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYASFLELYLQISPH
        MD R+W +LPQ ++DR++A LP P+F R R  C+R+Y LLF + FL  +L +SPH
Subjt:  MDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYASFLELYLQISPH

Q9FZK1 F-box only protein 67.7e-0534.29Show/hide
Query:  MDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYASFLELYLQISPHRRHWFLFFKLKGVSS
        MD  IW + PQ + + VV+ LP   FF+ R VC++W  L+   SF   + ++ P    WF     + V+S
Subjt:  MDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYASFLELYLQISPHRRHWFLFFKLKGVSS

Q9LFV5 F-box/kelch-repeat protein At5g157101.5e-0536.92Show/hide
Query:  RMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYASFLELYLQISPHRRHWFLFFK
        +M+  IW+ LP+ +L+ ++A +PP   FR R VCK+W  +L   SFL+ +  +S H      F+K
Subjt:  RMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYASFLELYLQISPHRRHWFLFFK

Arabidopsis top hitse value%identityAlignment
AT1G27340.1 Galactose oxidase/kelch repeat superfamily protein5.5e-0634.29Show/hide
Query:  MDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYASFLELYLQISPHRRHWFLFFKLKGVSS
        MD  IW + PQ + + VV+ LP   FF+ R VC++W  L+   SF   + ++ P    WF     + V+S
Subjt:  MDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYASFLELYLQISPHRRHWFLFFKLKGVSS

AT1G30950.1 F-box family protein2.5e-2755.83Show/hide
Query:  SSSLPFGYNIISGSNCGIISTCSTTTSSSSNNVALLTTGPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYASFLELYLQISPHRRHW
        S +LPF Y   S SN    +T STTT SSS        G  MD RIWSKLP  +LDRV+AFLPPPAFFR RCVCKR+Y LLF  +FLE YLQ+ P R + 
Subjt:  SSSLPFGYNIISGSNCGIISTCSTTTSSSSNNVALLTTGPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYASFLELYLQISPHRRHW

Query:  FLFFKLKGVSSHIYRNNNNS
        FLFFK K + S+IY+    +
Subjt:  FLFFKLKGVSSHIYRNNNNS

AT3G61590.1 Galactose oxidase/kelch repeat superfamily protein6.0e-0538.6Show/hide
Query:  SKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYASFLELYLQISPHRRHWFLFF
        S LP  +L+R+++FLP  + FRA  VCKRW  ++    FL  +   S  +R W+  F
Subjt:  SKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYASFLELYLQISPHRRHWFLFF

AT3G61590.2 Galactose oxidase/kelch repeat superfamily protein6.0e-0538.6Show/hide
Query:  SKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYASFLELYLQISPHRRHWFLFF
        S LP  +L+R+++FLP  + FRA  VCKRW  ++    FL  +   S  +R W+  F
Subjt:  SKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYASFLELYLQISPHRRHWFLFF

AT5G15710.1 Galactose oxidase/kelch repeat superfamily protein1.1e-0636.92Show/hide
Query:  RMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYASFLELYLQISPHRRHWFLFFK
        +M+  IW+ LP+ +L+ ++A +PP   FR R VCK+W  +L   SFL+ +  +S H      F+K
Subjt:  RMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYASFLELYLQISPHRRHWFLFFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTCAGTCACCATATGGATATGAGTCTTCACTCCTCCATGAGTAGTTCTCTTCCCTTTGGCTATAACATTATTTCCGGTTCAAATTGCGGAATTATTTCCACTTG
TTCCACTACCACTTCTTCTTCGAGTAATAATGTCGCACTACTAACGACGGGCCCTAGAATGGATAGCAGAATATGGAGTAAACTGCCGCAGAGGATTCTGGATCGGGTGG
TGGCGTTTCTTCCGCCGCCGGCCTTTTTTCGTGCTCGTTGTGTTTGTAAGAGATGGTACGGCCTTCTATTTTACGCTAGCTTTCTGGAATTGTACCTCCAAATTTCTCCA
CATCGCCGCCATTGGTTCCTGTTCTTCAAGCTCAAAGGCGTTTCCAGTCATATTTACAGGAATAATAATAACTCACCACTTGCTGGACCCGACCACTCCAGACCCACCTA
CGAAGGGTATATGCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTTCAGTCACCATATGGATATGAGTCTTCACTCCTCCATGAGTAGTTCTCTTCCCTTTGGCTATAACATTATTTCCGGTTCAAATTGCGGAATTATTTCCACTTG
TTCCACTACCACTTCTTCTTCGAGTAATAATGTCGCACTACTAACGACGGGCCCTAGAATGGATAGCAGAATATGGAGTAAACTGCCGCAGAGGATTCTGGATCGGGTGG
TGGCGTTTCTTCCGCCGCCGGCCTTTTTTCGTGCTCGTTGTGTTTGTAAGAGATGGTACGGCCTTCTATTTTACGCTAGCTTTCTGGAATTGTACCTCCAAATTTCTCCA
CATCGCCGCCATTGGTTCCTGTTCTTCAAGCTCAAAGGCGTTTCCAGTCATATTTACAGGAATAATAATAACTCACCACTTGCTGGACCCGACCACTCCAGACCCACCTA
CGAAGGGTATATGCCTTAA
Protein sequenceShow/hide protein sequence
MNFSHHMDMSLHSSMSSSLPFGYNIISGSNCGIISTCSTTTSSSSNNVALLTTGPRMDSRIWSKLPQRILDRVVAFLPPPAFFRARCVCKRWYGLLFYASFLELYLQISP
HRRHWFLFFKLKGVSSHIYRNNNNSPLAGPDHSRPTYEGYMP