; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G005450 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G005450
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description50S ribosomal protein L7/L12
Genome locationchr02:4756103..4758163
RNA-Seq ExpressionLsi02G005450
SyntenyLsi02G005450
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000206 - Ribosomal protein L7/L12
IPR008932 - Ribosomal protein L7/L12, oligomerisation
IPR013823 - Ribosomal protein L7/L12, C-terminal
IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
IPR015608 - Putative ribosomal protein L7/L12, plants
IPR036235 - Ribosomal protein L7/L12, oligomerisation domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584188.1 50S ribosomal protein L7/L12, partial [Cucurbita argyrosperma subsp. sororia]9.2e-9488.79Show/hide
Query:  MRLVFRIRHLLPNVFANTIRSPAVSLNPQKINGLHRNYGQPAGIEEEEEEVEIDQRRLPADYDPANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSS
        MRLV RI HLLPNV ANT RSPA++LNP  +NGLHRN+ QPA I EEEEEVEIDQRRLPADYDPANFDPT+HRSPPT RVFRLVDEISGLTLVEV+ELSS
Subjt:  MRLVFRIRHLLPNVFANTIRSPAVSLNPQKINGLHRNYGQPAGIEEEEEEVEIDQRRLPADYDPANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSS

Query:  ILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQI
        ILRKKLGMTDMPV+GVMK GAAGLAGMA KASSATAK+EKK EKTV+ELKLESYEA+AKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQ+
Subjt:  ILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQI

Query:  IEKMKALGAKVILE
        IEKMKALGAKVILE
Subjt:  IEKMKALGAKVILE

XP_022137691.1 uncharacterized protein LOC111009067 [Momordica charantia]2.3e-9791.59Show/hide
Query:  MRLVFRIRHLLPNVFANTIRSPAVSLNPQKINGLHRNYGQPAGIEEEEEEVEIDQRRLPADYDPANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSS
        M LV RIRHLLPNVFANTIRSPAV+LNP   NGLHRNY QPA IEEEE+EVEIDQRRLPADYDPANFDPTEHRSPPT RVFRLVDEISGLTLVEV+ELS+
Subjt:  MRLVFRIRHLLPNVFANTIRSPAVSLNPQKINGLHRNYGQPAGIEEEEEEVEIDQRRLPADYDPANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSS

Query:  ILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQI
        ILRKKLGMTDMPV+GVMKPGAAGL GMAMKAS+A AK+EKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQ+
Subjt:  ILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQI

Query:  IEKMKALGAKVILE
        IEKMKALGAKVILE
Subjt:  IEKMKALGAKVILE

XP_022924112.1 uncharacterized protein LOC111431646 [Cucurbita moschata]7.8e-9387.85Show/hide
Query:  MRLVFRIRHLLPNVFANTIRSPAVSLNPQKINGLHRNYGQPAGIEEEEEEVEIDQRRLPADYDPANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSS
        MRLV RI HLLPNV ANT RSPA++LNP  +NGLHR++ QPA I EEEEEVEIDQRRLPADYDPANFDPT+HRSPPT RVFRLVDEISGLTLVEV+ELSS
Subjt:  MRLVFRIRHLLPNVFANTIRSPAVSLNPQKINGLHRNYGQPAGIEEEEEEVEIDQRRLPADYDPANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSS

Query:  ILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQI
        ILRK+LGMTDMPV+GVMK GAAGLAGMA KASSATAK+EKK EKTV+ELKLESYEA+AKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQ+
Subjt:  ILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQI

Query:  IEKMKALGAKVILE
        IEKMKALGAKVILE
Subjt:  IEKMKALGAKVILE

XP_022954769.1 uncharacterized protein LOC111456924 [Cucurbita moschata]3.5e-9387.38Show/hide
Query:  MRLVFRIRHLLPNVFANTIRSPAVSLNPQKINGLHRNYGQPAGIEEEEEEVEIDQRRLPADYDPANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSS
        M LV R RHLLP VF N +RSP  + N   +NGLHRNY QPA IEEEEEEVEIDQRRLPADYDPANFDPT+HRSPPT RVFRLVDEISGLTLVEV+ELSS
Subjt:  MRLVFRIRHLLPNVFANTIRSPAVSLNPQKINGLHRNYGQPAGIEEEEEEVEIDQRRLPADYDPANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSS

Query:  ILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQI
        ILRKKLGMTDMPV+GVMKPGAAGLAGM MKAS+A AK+EKKPEKTVYELKLESYEA+AKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQ+
Subjt:  ILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQI

Query:  IEKMKALGAKVILE
        IEKMKALGAKVILE
Subjt:  IEKMKALGAKVILE

XP_038876937.1 50S ribosomal protein L7/L12 [Benincasa hispida]6.1e-9892.09Show/hide
Query:  MRLVFRIRHLLPNVFANTIRSPAVSLNPQKINGLHRNYGQPAGIEEEEEEVEIDQRRLPADYDPANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSS
        M LV RIRHLLPNVFANTIRSPAV+LNP  INGLHRNY QPA IE+EEEE+EIDQRRLPADYDPANFDPT+HRSPPT RVFRLVDEISGLTLVEV+ELSS
Subjt:  MRLVFRIRHLLPNVFANTIRSPAVSLNPQKINGLHRNYGQPAGIEEEEEEVEIDQRRLPADYDPANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSS

Query:  ILRKKLGMTDMPVIGVMKPGAAGLAGMAMKA-SSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQ
        ILRKKLGMTDMPV+GVMKPGAAGLAGMAMKA SSATAK+EKK EKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGE+
Subjt:  ILRKKLGMTDMPVIGVMKPGAAGLAGMAMKA-SSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQ

Query:  IIEKMKALGAKVILE
        IIEKMKALGAKVILE
Subjt:  IIEKMKALGAKVILE

TrEMBL top hitse value%identityAlignment
A0A6J1C7E3 uncharacterized protein LOC1110090671.1e-9791.59Show/hide
Query:  MRLVFRIRHLLPNVFANTIRSPAVSLNPQKINGLHRNYGQPAGIEEEEEEVEIDQRRLPADYDPANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSS
        M LV RIRHLLPNVFANTIRSPAV+LNP   NGLHRNY QPA IEEEE+EVEIDQRRLPADYDPANFDPTEHRSPPT RVFRLVDEISGLTLVEV+ELS+
Subjt:  MRLVFRIRHLLPNVFANTIRSPAVSLNPQKINGLHRNYGQPAGIEEEEEEVEIDQRRLPADYDPANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSS

Query:  ILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQI
        ILRKKLGMTDMPV+GVMKPGAAGL GMAMKAS+A AK+EKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQ+
Subjt:  ILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQI

Query:  IEKMKALGAKVILE
        IEKMKALGAKVILE
Subjt:  IEKMKALGAKVILE

A0A6J1E822 uncharacterized protein LOC1114316463.8e-9387.85Show/hide
Query:  MRLVFRIRHLLPNVFANTIRSPAVSLNPQKINGLHRNYGQPAGIEEEEEEVEIDQRRLPADYDPANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSS
        MRLV RI HLLPNV ANT RSPA++LNP  +NGLHR++ QPA I EEEEEVEIDQRRLPADYDPANFDPT+HRSPPT RVFRLVDEISGLTLVEV+ELSS
Subjt:  MRLVFRIRHLLPNVFANTIRSPAVSLNPQKINGLHRNYGQPAGIEEEEEEVEIDQRRLPADYDPANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSS

Query:  ILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQI
        ILRK+LGMTDMPV+GVMK GAAGLAGMA KASSATAK+EKK EKTV+ELKLESYEA+AKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQ+
Subjt:  ILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQI

Query:  IEKMKALGAKVILE
        IEKMKALGAKVILE
Subjt:  IEKMKALGAKVILE

A0A6J1GU05 uncharacterized protein LOC1114569241.7e-9387.38Show/hide
Query:  MRLVFRIRHLLPNVFANTIRSPAVSLNPQKINGLHRNYGQPAGIEEEEEEVEIDQRRLPADYDPANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSS
        M LV R RHLLP VF N +RSP  + N   +NGLHRNY QPA IEEEEEEVEIDQRRLPADYDPANFDPT+HRSPPT RVFRLVDEISGLTLVEV+ELSS
Subjt:  MRLVFRIRHLLPNVFANTIRSPAVSLNPQKINGLHRNYGQPAGIEEEEEEVEIDQRRLPADYDPANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSS

Query:  ILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQI
        ILRKKLGMTDMPV+GVMKPGAAGLAGM MKAS+A AK+EKKPEKTVYELKLESYEA+AKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQ+
Subjt:  ILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQI

Query:  IEKMKALGAKVILE
        IEKMKALGAKVILE
Subjt:  IEKMKALGAKVILE

A0A6J1JZ85 uncharacterized protein LOC1114901811.1e-9286.92Show/hide
Query:  MRLVFRIRHLLPNVFANTIRSPAVSLNPQKINGLHRNYGQPAGIEEEEEEVEIDQRRLPADYDPANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSS
        M LV R RHLLP VF N +RSP  + N   +NGLHRNY QPA IEEEEEEVEIDQRRLPADYDPANFDPT+HRSPPT RVFRLVDEISGLTLVEV+ELSS
Subjt:  MRLVFRIRHLLPNVFANTIRSPAVSLNPQKINGLHRNYGQPAGIEEEEEEVEIDQRRLPADYDPANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSS

Query:  ILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQI
        ILRKKLGMTDMPV+GVMKPGAAGLAGM MKAS+A AK+ KKPEKTVYELKLESYEA+AKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQ+
Subjt:  ILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQI

Query:  IEKMKALGAKVILE
        IEKMKALGAKVILE
Subjt:  IEKMKALGAKVILE

A0A6J1KHE7 uncharacterized protein LOC1114952775.4e-9287.38Show/hide
Query:  MRLVFRIRHLLPNVFANTIRSPAVSLNPQKINGLHRNYGQPAGIEEEEEEVEIDQRRLPADYDPANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSS
        MRLV RI HLLPNV ANT RSPA++LNP  +NGLHRN+ QPA I  EEEEVEIDQRRLPADYD ANFDPT+HRSPPT RVFRLVDEISGLTLVEV+ELSS
Subjt:  MRLVFRIRHLLPNVFANTIRSPAVSLNPQKINGLHRNYGQPAGIEEEEEEVEIDQRRLPADYDPANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSS

Query:  ILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQI
        ILRKKLG+TDMPV+GVMK GAAGLAGMA KASSATAK+EKK EKTV+ELKLESYEA+AKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQ+
Subjt:  ILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQI

Query:  IEKMKALGAKVILE
        IEKMKALGAKVILE
Subjt:  IEKMKALGAKVILE

SwissProt top hitse value%identityAlignment
A4YSI0 50S ribosomal protein L7/L121.4e-1540.6Show/hide
Query:  RLVDEISGLTLVEVSELSSILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLV
        ++VD++S LT++E +EL+ +L +K G++    + V  PG  G         +A A  E+K E TV    + +     KI++IKEVR+ T LGLKEAKDLV
Subjt:  RLVDEISGLTLVEVSELSSILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLV

Query:  EKTPSVLKKGLSKEEGEQIIEKMKALGAKVILE
        E  P  +K+G++KEE E+I  +++  GAKV L+
Subjt:  EKTPSVLKKGLSKEEGEQIIEKMKALGAKVILE

A5ELN8 50S ribosomal protein L7/L121.0e-1540.6Show/hide
Query:  RLVDEISGLTLVEVSELSSILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLV
        ++VD++S LT++E +EL+ +L +K G++    + V  PGA G         +A A  E+K E TV    + +     KI++IKEVR+ T LGLKEAKDLV
Subjt:  RLVDEISGLTLVEVSELSSILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLV

Query:  EKTPSVLKKGLSKEEGEQIIEKMKALGAKVILE
        E  P  +K+G++K+E E+I  +++  GAKV L+
Subjt:  EKTPSVLKKGLSKEEGEQIIEKMKALGAKVILE

P41189 50S ribosomal protein L7/L121.2e-1641.22Show/hide
Query:  LVDEISGLTLVEVSELSSILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVE
        +V+++S LTL++ +ELS  L ++ G+             +  A +A+ AS+A        EKT +E+ LE ++A  KI +IKEVR+ T+LGLKEAKD VE
Subjt:  LVDEISGLTLVEVSELSSILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVE

Query:  KTPSVLKKGLSKEEGEQIIEKMKALGAKVIL
          P  LK G+SK+E E++ +K++A GA +IL
Subjt:  KTPSVLKKGLSKEEGEQIIEKMKALGAKVIL

P53163 54S ribosomal protein L12, mitochondrial2.7e-1640.82Show/hide
Query:  PPTPRVFRLVDEISGLTLVEVSELSSILRKKLGMTD--MPVIGVMKPGAAGLAGMAMKASS----ATAKDEKKPE-KTVYELKLESYEASAKIKIIKEVR
        P  P++ ++V +IS LTL+E S L + L+  L + +  MP+ G M  GAAG     + +S+    + A++E KPE KTV+ +KL+S++   K K+IKEV+
Subjt:  PPTPRVFRLVDEISGLTLVEVSELSSILRKKLGMTD--MPVIGVMKPGAAGLAGMAMKASS----ATAKDEKKPE-KTVYELKLESYEASAKIKIIKEVR

Query:  SFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQIIEKMKALGAKVILE
            L L EAK  VE  P VLK+ ++K++ E+I + ++ LGAKV LE
Subjt:  SFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQIIEKMKALGAKVILE

Q9USJ9 54S ribosomal protein L12, mitochondrial5.9e-1941.91Show/hide
Query:  RVFRLVDEISGLTLVEVSELSSILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAK
        ++  +VD+IS L+L+E SEL   L++KL + ++  +  + P  A  A      S   A +EKK EKT + LKLES++A +K K+IKEV+S   L L +AK
Subjt:  RVFRLVDEISGLTLVEVSELSSILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAK

Query:  DLVEKTPSVLKKGLSKEEGEQIIEKMKALGAKVILE
          VE  P VLK+ + KE+ E I  K++ L  KV+LE
Subjt:  DLVEKTPSVLKKGLSKEEGEQIIEKMKALGAKVILE

Arabidopsis top hitse value%identityAlignment
AT1G70190.1 Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like2.3e-6370.27Show/hide
Query:  GLHRNYGQPAGIEEEEEEVEIDQRRLPADYDPANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSSILRKKLGMTDMPVIGVMKPGA---AGLAGMAM
        G +R+Y QPA IE+EEEE E DQR+LP DYDPA FDPTEHRSPPT RVFRLVDEIS LTL+E+SEL SI+ KK GMT++P + VMKPGA    G+ G   
Subjt:  GLHRNYGQPAGIEEEEEEVEIDQRRLPADYDPANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSSILRKKLGMTDMPVIGVMKPGA---AGLAGMAM

Query:  KASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQIIEKMKALGAKVILE
          S +   +E K EKTV+E+KLES+EASAKIKIIKE+RSFTDLGLKEAK LVEKTP++LK GLSKEEGE+I+EK+KALGAKV+LE
Subjt:  KASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQIIEKMKALGAKVILE

AT1G70190.2 Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like2.3e-6370.27Show/hide
Query:  GLHRNYGQPAGIEEEEEEVEIDQRRLPADYDPANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSSILRKKLGMTDMPVIGVMKPGA---AGLAGMAM
        G +R+Y QPA IE+EEEE E DQR+LP DYDPA FDPTEHRSPPT RVFRLVDEIS LTL+E+SEL SI+ KK GMT++P + VMKPGA    G+ G   
Subjt:  GLHRNYGQPAGIEEEEEEVEIDQRRLPADYDPANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSSILRKKLGMTDMPVIGVMKPGA---AGLAGMAM

Query:  KASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQIIEKMKALGAKVILE
          S +   +E K EKTV+E+KLES+EASAKIKIIKE+RSFTDLGLKEAK LVEKTP++LK GLSKEEGE+I+EK+KALGAKV+LE
Subjt:  KASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQIIEKMKALGAKVILE

AT3G06040.1 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein1.5e-2239.07Show/hide
Query:  PANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSSILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKII
        P+ +DP   R  P+ ++  L + I+ L+  E  ++   L + L +    +I           G+  K  +     E+K EKT +++KLE + AS KIK+I
Subjt:  PANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSSILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKII

Query:  KEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQIIEKMKALGAKVILE
        KEVR+FT LGLKEAK+LVEK P++LK+G++KEE  +II K+KA+G   ++E
Subjt:  KEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQIIEKMKALGAKVILE

AT3G06040.2 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein1.5e-2239.07Show/hide
Query:  PANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSSILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKII
        P+ +DP   R  P+ ++  L + I+ L+  E  ++   L + L +    +I           G+  K  +     E+K EKT +++KLE + AS KIK+I
Subjt:  PANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSSILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKII

Query:  KEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQIIEKMKALGAKVILE
        KEVR+FT LGLKEAK+LVEK P++LK+G++KEE  +II K+KA+G   ++E
Subjt:  KEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQIIEKMKALGAKVILE

AT4G36420.1 Ribosomal protein L12 family protein2.8e-3251.03Show/hide
Query:  HRSPPT--PRVFRLVDEISGLTLVEVSELSSILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSF
        + SP T    V ++V+E+S LTL+E  +L+ ILR+KL ++++PV+  M PG +     A K++    K++KK  KT +++ L++Y+A +KIK+IKEVR+ 
Subjt:  HRSPPT--PRVFRLVDEISGLTLVEVSELSSILRKKLGMTDMPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSF

Query:  TDLGLKEAKDLVEKTPSVLKKGLSKEEGEQIIEKMKALGAKVILE
        T LGLKEAKDLVEK P++LKKG+SKEE E+IIEK+KA+GAKV +E
Subjt:  TDLGLKEAKDLVEKTPSVLKKGLSKEEGEQIIEKMKALGAKVILE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCTTAGTTTTCAGAATAAGGCATCTCCTACCCAATGTGTTTGCAAACACCATTCGCTCTCCTGCAGTTTCCCTCAATCCTCAAAAAATAAATGGACTACATAGAAA
TTATGGTCAACCTGCTGGGATAGAGGAGGAAGAGGAAGAGGTGGAAATTGACCAGAGAAGGCTTCCAGCTGATTACGATCCTGCTAATTTTGATCCAACAGAGCATCGTA
GTCCTCCAACTCCTCGCGTTTTTAGGCTTGTAGATGAAATATCTGGACTCACATTAGTTGAAGTTTCTGAATTATCTTCCATTTTGAGGAAAAAATTAGGAATGACAGAC
ATGCCAGTTATTGGAGTTATGAAACCAGGAGCTGCCGGATTGGCTGGAATGGCAATGAAAGCATCATCAGCAACTGCCAAGGATGAGAAGAAGCCAGAAAAGACTGTTTA
TGAGTTGAAACTAGAGTCTTACGAAGCATCTGCAAAGATTAAAATTATCAAGGAGGTAAGAAGTTTCACTGATTTAGGTCTCAAAGAGGCAAAAGATTTAGTGGAGAAAA
CCCCATCGGTGTTGAAGAAGGGGCTATCAAAGGAAGAGGGTGAACAAATAATTGAAAAGATGAAGGCACTTGGTGCAAAAGTGATCTTGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATTTTTTTGGGGAGAGACGAAATGGGAGCCCTAATTTCCCATTGCCATTGATCTGCAGCACTGTCCCTCTGGACTCACCCACCTCCATTTCCGGTCGAGATAGAAGCTTT
TTCATACATTATCATTGGCAATCCACCAATCCTCACGGCTCACTTCAAACCACCACGTTCCCGGCTTCAGCGCCTAATTCTCATCTCTTAGCGCCACTGAATTGTTCTTG
CGAAAGCCAGAAATGGGTTTGAACTAAGTAGATTGCTACCTCAGGGGGAAAGTTAATTTGGCAACTTGAGAAATGCGCTTAGTTTTCAGAATAAGGCATCTCCTACCCAA
TGTGTTTGCAAACACCATTCGCTCTCCTGCAGTTTCCCTCAATCCTCAAAAAATAAATGGACTACATAGAAATTATGGTCAACCTGCTGGGATAGAGGAGGAAGAGGAAG
AGGTGGAAATTGACCAGAGAAGGCTTCCAGCTGATTACGATCCTGCTAATTTTGATCCAACAGAGCATCGTAGTCCTCCAACTCCTCGCGTTTTTAGGCTTGTAGATGAA
ATATCTGGACTCACATTAGTTGAAGTTTCTGAATTATCTTCCATTTTGAGGAAAAAATTAGGAATGACAGACATGCCAGTTATTGGAGTTATGAAACCAGGAGCTGCCGG
ATTGGCTGGAATGGCAATGAAAGCATCATCAGCAACTGCCAAGGATGAGAAGAAGCCAGAAAAGACTGTTTATGAGTTGAAACTAGAGTCTTACGAAGCATCTGCAAAGA
TTAAAATTATCAAGGAGGTAAGAAGTTTCACTGATTTAGGTCTCAAAGAGGCAAAAGATTTAGTGGAGAAAACCCCATCGGTGTTGAAGAAGGGGCTATCAAAGGAAGAG
GGTGAACAAATAATTGAAAAGATGAAGGCACTTGGTGCAAAAGTGATCTTGGAATGATGTCTTGATTTTCTCGCAAAATAGCATTATCCATCTCCAAAACGAATGCGAGA
GGAGCAACATCTTCTGTTCCATTTCTGTCTCAATAGTCAAACGAAATACACCTGTATTGCTGCTTTTCCCCTCTTTTTTTCCCATATGTATTGTTTAGGGGCATTTTTTA
GAACTCAAGCGCTACTAGTCAGTTGATGGATCAACTTAATTTTGAAATATTTGGATTAGATTGTTTT
Protein sequenceShow/hide protein sequence
MRLVFRIRHLLPNVFANTIRSPAVSLNPQKINGLHRNYGQPAGIEEEEEEVEIDQRRLPADYDPANFDPTEHRSPPTPRVFRLVDEISGLTLVEVSELSSILRKKLGMTD
MPVIGVMKPGAAGLAGMAMKASSATAKDEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQIIEKMKALGAKVILE