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Lsi02G005530 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G005530
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAnkyrin repeat-containing protein
Genome locationchr02:4855334..4855789
RNA-Seq ExpressionLsi02G005530
SyntenyLsi02G005530
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ99313.1 uncharacterized protein E5676_scaffold248G005260 [Cucumis melo var. makuwa]4.1e-3263.98Show/hide
Query:  MAP--LKKNNIQ-KNVRIRKKRV--KYCVRKSHRHTNTAVPNSPSSSSTFNYPIINNIPNNTNFIDKSSHHSPPHEIQQEH-ASNSFHVHLS-DTLSSIV
        MAP   KKN+I+  NVRIRKKRV  +YC+RKSHRHT   +P+  SSSSTFN+PI NNIPNNTNFI +SSH SP HEIQ+EH  SNSFH HLS DT+SSI+
Subjt:  MAP--LKKNNIQ-KNVRIRKKRV--KYCVRKSHRHTNTAVPNSPSSSSTFNYPIINNIPNNTNFIDKSSHHSPPHEIQQEH-ASNSFHVHLS-DTLSSIV

Query:  EDDPVPPPSTA-DDGQVEADAS-GVGCRGLESRTIDIAAVLEDQQ-RNSNAKIKIEAPSRT
              P STA DDGQ+EA+A+ G+G RG + +TIDIAAVLE+QQ RNS+     +APSRT
Subjt:  EDDPVPPPSTA-DDGQVEADAS-GVGCRGLESRTIDIAAVLEDQQ-RNSNAKIKIEAPSRT

XP_008440605.2 PREDICTED: uncharacterized protein LOC103484975 isoform X1 [Cucumis melo]6.0e-3163.52Show/hide
Query:  MAP--LKKNNIQ-KNVRIRKKRV--KYCVRKSHRHTNTAVPNSPSSSSTFNYPIINNIPNNTNFIDKSSHHSPPHEIQQEH-ASNSFHVHLS-DTLSSIV
        MAP   KKN+I+  NVRIRKKRV  +YC+RKSHRHT   +P+  SSSSTFN+PI NNIPNNTNFI +SSH SP HEIQ+EH  SNSFH HLS DT+SSI+
Subjt:  MAP--LKKNNIQ-KNVRIRKKRV--KYCVRKSHRHTNTAVPNSPSSSSTFNYPIINNIPNNTNFIDKSSHHSPPHEIQQEH-ASNSFHVHLS-DTLSSIV

Query:  EDDPVPPPSTA-DDGQVEADAS-GVGCRGLESRTIDIAAVLEDQQ-RNSNAKIKIEAPS
              P STA DDGQ+EA+A+ G+G RG + +TIDIAAVLE+QQ RNS+     +APS
Subjt:  EDDPVPPPSTA-DDGQVEADAS-GVGCRGLESRTIDIAAVLEDQQ-RNSNAKIKIEAPS

XP_011652459.1 ankyrin repeat-containing protein ITN1 isoform X1 [Cucumis sativus]3.5e-3163.82Show/hide
Query:  KKNNIQ-KNVRIRKKRV--KYCVRKSHRHTNTAVPNSPSSSSTFNYPIINNIPNNTNFIDKSSHHSPPHEIQQE-HASNSFHVHLS-DTLSSIVEDDPVP
        KKN I+  NVRIRKKRV  KYC+RK+H HT   +P+  SSSSTFN+PI  NIPNNTNFI +SSH SP  EIQ+E +ASNSFH HLS DT+SSI     +P
Subjt:  KKNNIQ-KNVRIRKKRV--KYCVRKSHRHTNTAVPNSPSSSSTFNYPIINNIPNNTNFIDKSSHHSPPHEIQQE-HASNSFHVHLS-DTLSSIVEDDPVP

Query:  PPSTADDGQVEADA-SGVGCRGLESRTIDIAAVLEDQQ-RNSNAKIKIEAPS
        PPSTADDGQ+E DA  G+G RG + +TIDIAAVLE+QQ RNS+     +APS
Subjt:  PPSTADDGQVEADA-SGVGCRGLESRTIDIAAVLEDQQ-RNSNAKIKIEAPS

XP_011652463.1 uncharacterized protein LOC101216177 isoform X3 [Cucumis sativus]3.5e-3163.82Show/hide
Query:  KKNNIQ-KNVRIRKKRV--KYCVRKSHRHTNTAVPNSPSSSSTFNYPIINNIPNNTNFIDKSSHHSPPHEIQQE-HASNSFHVHLS-DTLSSIVEDDPVP
        KKN I+  NVRIRKKRV  KYC+RK+H HT   +P+  SSSSTFN+PI  NIPNNTNFI +SSH SP  EIQ+E +ASNSFH HLS DT+SSI     +P
Subjt:  KKNNIQ-KNVRIRKKRV--KYCVRKSHRHTNTAVPNSPSSSSTFNYPIINNIPNNTNFIDKSSHHSPPHEIQQE-HASNSFHVHLS-DTLSSIVEDDPVP

Query:  PPSTADDGQVEADA-SGVGCRGLESRTIDIAAVLEDQQ-RNSNAKIKIEAPS
        PPSTADDGQ+E DA  G+G RG + +TIDIAAVLE+QQ RNS+     +APS
Subjt:  PPSTADDGQVEADA-SGVGCRGLESRTIDIAAVLEDQQ-RNSNAKIKIEAPS

XP_031736037.1 ankyrin repeat-containing protein ITN1 isoform X2 [Cucumis sativus]3.5e-3163.82Show/hide
Query:  KKNNIQ-KNVRIRKKRV--KYCVRKSHRHTNTAVPNSPSSSSTFNYPIINNIPNNTNFIDKSSHHSPPHEIQQE-HASNSFHVHLS-DTLSSIVEDDPVP
        KKN I+  NVRIRKKRV  KYC+RK+H HT   +P+  SSSSTFN+PI  NIPNNTNFI +SSH SP  EIQ+E +ASNSFH HLS DT+SSI     +P
Subjt:  KKNNIQ-KNVRIRKKRV--KYCVRKSHRHTNTAVPNSPSSSSTFNYPIINNIPNNTNFIDKSSHHSPPHEIQQE-HASNSFHVHLS-DTLSSIVEDDPVP

Query:  PPSTADDGQVEADA-SGVGCRGLESRTIDIAAVLEDQQ-RNSNAKIKIEAPS
        PPSTADDGQ+E DA  G+G RG + +TIDIAAVLE+QQ RNS+     +APS
Subjt:  PPSTADDGQVEADA-SGVGCRGLESRTIDIAAVLEDQQ-RNSNAKIKIEAPS

TrEMBL top hitse value%identityAlignment
A0A0A0LUL7 ANK_REP_REGION domain-containing protein1.7e-3163.82Show/hide
Query:  KKNNIQ-KNVRIRKKRV--KYCVRKSHRHTNTAVPNSPSSSSTFNYPIINNIPNNTNFIDKSSHHSPPHEIQQE-HASNSFHVHLS-DTLSSIVEDDPVP
        KKN I+  NVRIRKKRV  KYC+RK+H HT   +P+  SSSSTFN+PI  NIPNNTNFI +SSH SP  EIQ+E +ASNSFH HLS DT+SSI     +P
Subjt:  KKNNIQ-KNVRIRKKRV--KYCVRKSHRHTNTAVPNSPSSSSTFNYPIINNIPNNTNFIDKSSHHSPPHEIQQE-HASNSFHVHLS-DTLSSIVEDDPVP

Query:  PPSTADDGQVEADA-SGVGCRGLESRTIDIAAVLEDQQ-RNSNAKIKIEAPS
        PPSTADDGQ+E DA  G+G RG + +TIDIAAVLE+QQ RNS+     +APS
Subjt:  PPSTADDGQVEADA-SGVGCRGLESRTIDIAAVLEDQQ-RNSNAKIKIEAPS

A0A1S3B243 uncharacterized protein LOC103484975 isoform X12.9e-3163.52Show/hide
Query:  MAP--LKKNNIQ-KNVRIRKKRV--KYCVRKSHRHTNTAVPNSPSSSSTFNYPIINNIPNNTNFIDKSSHHSPPHEIQQEH-ASNSFHVHLS-DTLSSIV
        MAP   KKN+I+  NVRIRKKRV  +YC+RKSHRHT   +P+  SSSSTFN+PI NNIPNNTNFI +SSH SP HEIQ+EH  SNSFH HLS DT+SSI+
Subjt:  MAP--LKKNNIQ-KNVRIRKKRV--KYCVRKSHRHTNTAVPNSPSSSSTFNYPIINNIPNNTNFIDKSSHHSPPHEIQQEH-ASNSFHVHLS-DTLSSIV

Query:  EDDPVPPPSTA-DDGQVEADAS-GVGCRGLESRTIDIAAVLEDQQ-RNSNAKIKIEAPS
              P STA DDGQ+EA+A+ G+G RG + +TIDIAAVLE+QQ RNS+     +APS
Subjt:  EDDPVPPPSTA-DDGQVEADAS-GVGCRGLESRTIDIAAVLEDQQ-RNSNAKIKIEAPS

A0A1S4DY91 uncharacterized protein LOC103484975 isoform X22.9e-3163.52Show/hide
Query:  MAP--LKKNNIQ-KNVRIRKKRV--KYCVRKSHRHTNTAVPNSPSSSSTFNYPIINNIPNNTNFIDKSSHHSPPHEIQQEH-ASNSFHVHLS-DTLSSIV
        MAP   KKN+I+  NVRIRKKRV  +YC+RKSHRHT   +P+  SSSSTFN+PI NNIPNNTNFI +SSH SP HEIQ+EH  SNSFH HLS DT+SSI+
Subjt:  MAP--LKKNNIQ-KNVRIRKKRV--KYCVRKSHRHTNTAVPNSPSSSSTFNYPIINNIPNNTNFIDKSSHHSPPHEIQQEH-ASNSFHVHLS-DTLSSIV

Query:  EDDPVPPPSTA-DDGQVEADAS-GVGCRGLESRTIDIAAVLEDQQ-RNSNAKIKIEAPS
              P STA DDGQ+EA+A+ G+G RG + +TIDIAAVLE+QQ RNS+     +APS
Subjt:  EDDPVPPPSTA-DDGQVEADAS-GVGCRGLESRTIDIAAVLEDQQ-RNSNAKIKIEAPS

A0A5A7UP23 Ankyrin repeat-containing protein2.9e-3163.52Show/hide
Query:  MAP--LKKNNIQ-KNVRIRKKRV--KYCVRKSHRHTNTAVPNSPSSSSTFNYPIINNIPNNTNFIDKSSHHSPPHEIQQEH-ASNSFHVHLS-DTLSSIV
        MAP   KKN+I+  NVRIRKKRV  +YC+RKSHRHT   +P+  SSSSTFN+PI NNIPNNTNFI +SSH SP HEIQ+EH  SNSFH HLS DT+SSI+
Subjt:  MAP--LKKNNIQ-KNVRIRKKRV--KYCVRKSHRHTNTAVPNSPSSSSTFNYPIINNIPNNTNFIDKSSHHSPPHEIQQEH-ASNSFHVHLS-DTLSSIV

Query:  EDDPVPPPSTA-DDGQVEADAS-GVGCRGLESRTIDIAAVLEDQQ-RNSNAKIKIEAPS
              P STA DDGQ+EA+A+ G+G RG + +TIDIAAVLE+QQ RNS+     +APS
Subjt:  EDDPVPPPSTA-DDGQVEADAS-GVGCRGLESRTIDIAAVLEDQQ-RNSNAKIKIEAPS

A0A5D3BJ59 Uncharacterized protein2.0e-3263.98Show/hide
Query:  MAP--LKKNNIQ-KNVRIRKKRV--KYCVRKSHRHTNTAVPNSPSSSSTFNYPIINNIPNNTNFIDKSSHHSPPHEIQQEH-ASNSFHVHLS-DTLSSIV
        MAP   KKN+I+  NVRIRKKRV  +YC+RKSHRHT   +P+  SSSSTFN+PI NNIPNNTNFI +SSH SP HEIQ+EH  SNSFH HLS DT+SSI+
Subjt:  MAP--LKKNNIQ-KNVRIRKKRV--KYCVRKSHRHTNTAVPNSPSSSSTFNYPIINNIPNNTNFIDKSSHHSPPHEIQQEH-ASNSFHVHLS-DTLSSIV

Query:  EDDPVPPPSTA-DDGQVEADAS-GVGCRGLESRTIDIAAVLEDQQ-RNSNAKIKIEAPSRT
              P STA DDGQ+EA+A+ G+G RG + +TIDIAAVLE+QQ RNS+     +APSRT
Subjt:  EDDPVPPPSTA-DDGQVEADAS-GVGCRGLESRTIDIAAVLEDQQ-RNSNAKIKIEAPSRT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCCTTGAAGAAGAATAATATTCAAAAAAATGTGAGGATAAGGAAGAAGAGAGTGAAGTACTGTGTGAGAAAATCCCACCGCCACACAAATACTGCTGTCCCAAA
TTCTCCATCTTCTTCATCTACTTTTAATTATCCCATTATTAATAATATTCCCAATAACACCAATTTCATCGACAAATCATCTCATCATTCTCCCCCACACGAAATTCAAC
AGGAACATGCTTCTAATTCCTTCCATGTCCACTTGTCGGATACCCTTTCTTCCATTGTCGAAGATGATCCTGTTCCTCCGCCGTCTACGGCTGACGACGGCCAAGTGGAG
GCGGATGCCAGTGGGGTCGGTTGCAGGGGATTGGAGAGCCGGACAATAGACATTGCAGCAGTTTTGGAAGATCAACAACGGAATTCTAATGCTAAGATCAAGATCGAAGC
TCCATCACGTACGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCCTTGAAGAAGAATAATATTCAAAAAAATGTGAGGATAAGGAAGAAGAGAGTGAAGTACTGTGTGAGAAAATCCCACCGCCACACAAATACTGCTGTCCCAAA
TTCTCCATCTTCTTCATCTACTTTTAATTATCCCATTATTAATAATATTCCCAATAACACCAATTTCATCGACAAATCATCTCATCATTCTCCCCCACACGAAATTCAAC
AGGAACATGCTTCTAATTCCTTCCATGTCCACTTGTCGGATACCCTTTCTTCCATTGTCGAAGATGATCCTGTTCCTCCGCCGTCTACGGCTGACGACGGCCAAGTGGAG
GCGGATGCCAGTGGGGTCGGTTGCAGGGGATTGGAGAGCCGGACAATAGACATTGCAGCAGTTTTGGAAGATCAACAACGGAATTCTAATGCTAAGATCAAGATCGAAGC
TCCATCACGTACGTAA
Protein sequenceShow/hide protein sequence
MAPLKKNNIQKNVRIRKKRVKYCVRKSHRHTNTAVPNSPSSSSTFNYPIINNIPNNTNFIDKSSHHSPPHEIQQEHASNSFHVHLSDTLSSIVEDDPVPPPSTADDGQVE
ADASGVGCRGLESRTIDIAAVLEDQQRNSNAKIKIEAPSRT