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Lsi02G005600 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G005600
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionserine/arginine repetitive matrix protein 1-like
Genome locationchr02:4928268..4928831
RNA-Seq ExpressionLsi02G005600
SyntenyLsi02G005600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055390.1 uncharacterized protein E6C27_scaffold80G002350 [Cucumis melo var. makuwa]2.2e-2245.45Show/hide
Query:  MSPNRSRSSRATGKKKTAPPNNQEEQQSWRRNYTQRATK-------RASNSSGLHLPKSTLKIAFSGRREQNNLQIPTLK--SPQRNHLRFQTASNLKGG
        M P  S  SR+    +T  P + EEQQ  R N T+ AT         +S SSG+  P+  LKI  +   +      P  K  +P +      + SNLK G
Subjt:  MSPNRSRSSRATGKKKTAPPNNQEEQQSWRRNYTQRATK-------RASNSSGLHLPKSTLKIAFSGRREQNNLQIPTLK--SPQRNHLRFQTASNLKGG

Query:  FSFNSSRSLSGNRKYFDSPNASPKPFQSLGRKEEFG-SQRKAPRILFKIYQEIASHRQGNSSITSYFTKLKELWDQLAKTYSDL-PQYSSDAIEMIDE
         +           K+  SPN SP        K++FG SQ  AP IL KIY+EIA HRQGNSSITSYFTKLKELWDQLAK Y+DL PQYSSDAI M+ E
Subjt:  FSFNSSRSLSGNRKYFDSPNASPKPFQSLGRKEEFG-SQRKAPRILFKIYQEIASHRQGNSSITSYFTKLKELWDQLAKTYSDL-PQYSSDAIEMIDE

TYJ99320.1 hypothetical protein E5676_scaffold248G005340 [Cucumis melo var. makuwa]2.2e-2245.45Show/hide
Query:  MSPNRSRSSRATGKKKTAPPNNQEEQQSWRRNYTQRATK-------RASNSSGLHLPKSTLKIAFSGRREQNNLQIPTLK--SPQRNHLRFQTASNLKGG
        M P  S  SR+    +T  P + EEQQ  R N T+ AT         +S SSG+  P+  LKI  +   +      P  K  +P +      + SNLK G
Subjt:  MSPNRSRSSRATGKKKTAPPNNQEEQQSWRRNYTQRATK-------RASNSSGLHLPKSTLKIAFSGRREQNNLQIPTLK--SPQRNHLRFQTASNLKGG

Query:  FSFNSSRSLSGNRKYFDSPNASPKPFQSLGRKEEFG-SQRKAPRILFKIYQEIASHRQGNSSITSYFTKLKELWDQLAKTYSDL-PQYSSDAIEMIDE
         +           K+  SPN SP        K++FG SQ  AP IL KIY+EIA HRQGNSSITSYFTKLKELWDQLAK Y+DL PQYSSDAI M+ E
Subjt:  FSFNSSRSLSGNRKYFDSPNASPKPFQSLGRKEEFG-SQRKAPRILFKIYQEIASHRQGNSSITSYFTKLKELWDQLAKTYSDL-PQYSSDAIEMIDE

XP_022137505.1 uncharacterized protein LOC111008934 isoform X1 [Momordica charantia]5.1e-0869.23Show/hide
Query:  SQRKAPRILFKIYQEIASHRQGNSSITSYFTKLKELWDQLAKTYSDLPQYSS
        SQ   PRI F+IY++IASHRQGNSSITSYFT+LK LWD+L +TY+DL Q  S
Subjt:  SQRKAPRILFKIYQEIASHRQGNSSITSYFTKLKELWDQLAKTYSDLPQYSS

XP_022137506.1 uncharacterized protein LOC111008934 isoform X2 [Momordica charantia]5.1e-0869.23Show/hide
Query:  SQRKAPRILFKIYQEIASHRQGNSSITSYFTKLKELWDQLAKTYSDLPQYSS
        SQ   PRI F+IY++IASHRQGNSSITSYFT+LK LWD+L +TY+DL Q  S
Subjt:  SQRKAPRILFKIYQEIASHRQGNSSITSYFTKLKELWDQLAKTYSDLPQYSS

XP_022137569.1 uncharacterized protein LOC111008986 [Momordica charantia]7.9e-0968.42Show/hide
Query:  KEEFGSQRKAPRILFKIYQEIASHRQGNSSITSYFTKLKELWDQLAKTYSDLPQYSS
        KEE   Q  A RIL +IY++IASHRQGNSSITSYFTKL+ LW++L +TYSDLPQ  S
Subjt:  KEEFGSQRKAPRILFKIYQEIASHRQGNSSITSYFTKLKELWDQLAKTYSDLPQYSS

TrEMBL top hitse value%identityAlignment
A0A5A7UJM8 Uncharacterized protein1.0e-2245.45Show/hide
Query:  MSPNRSRSSRATGKKKTAPPNNQEEQQSWRRNYTQRATK-------RASNSSGLHLPKSTLKIAFSGRREQNNLQIPTLK--SPQRNHLRFQTASNLKGG
        M P  S  SR+    +T  P + EEQQ  R N T+ AT         +S SSG+  P+  LKI  +   +      P  K  +P +      + SNLK G
Subjt:  MSPNRSRSSRATGKKKTAPPNNQEEQQSWRRNYTQRATK-------RASNSSGLHLPKSTLKIAFSGRREQNNLQIPTLK--SPQRNHLRFQTASNLKGG

Query:  FSFNSSRSLSGNRKYFDSPNASPKPFQSLGRKEEFG-SQRKAPRILFKIYQEIASHRQGNSSITSYFTKLKELWDQLAKTYSDL-PQYSSDAIEMIDE
         +           K+  SPN SP        K++FG SQ  AP IL KIY+EIA HRQGNSSITSYFTKLKELWDQLAK Y+DL PQYSSDAI M+ E
Subjt:  FSFNSSRSLSGNRKYFDSPNASPKPFQSLGRKEEFG-SQRKAPRILFKIYQEIASHRQGNSSITSYFTKLKELWDQLAKTYSDL-PQYSSDAIEMIDE

A0A5D3BHR0 Uncharacterized protein1.0e-2245.45Show/hide
Query:  MSPNRSRSSRATGKKKTAPPNNQEEQQSWRRNYTQRATK-------RASNSSGLHLPKSTLKIAFSGRREQNNLQIPTLK--SPQRNHLRFQTASNLKGG
        M P  S  SR+    +T  P + EEQQ  R N T+ AT         +S SSG+  P+  LKI  +   +      P  K  +P +      + SNLK G
Subjt:  MSPNRSRSSRATGKKKTAPPNNQEEQQSWRRNYTQRATK-------RASNSSGLHLPKSTLKIAFSGRREQNNLQIPTLK--SPQRNHLRFQTASNLKGG

Query:  FSFNSSRSLSGNRKYFDSPNASPKPFQSLGRKEEFG-SQRKAPRILFKIYQEIASHRQGNSSITSYFTKLKELWDQLAKTYSDL-PQYSSDAIEMIDE
         +           K+  SPN SP        K++FG SQ  AP IL KIY+EIA HRQGNSSITSYFTKLKELWDQLAK Y+DL PQYSSDAI M+ E
Subjt:  FSFNSSRSLSGNRKYFDSPNASPKPFQSLGRKEEFG-SQRKAPRILFKIYQEIASHRQGNSSITSYFTKLKELWDQLAKTYSDL-PQYSSDAIEMIDE

A0A6J1C6T8 uncharacterized protein LOC111008934 isoform X22.5e-0869.23Show/hide
Query:  SQRKAPRILFKIYQEIASHRQGNSSITSYFTKLKELWDQLAKTYSDLPQYSS
        SQ   PRI F+IY++IASHRQGNSSITSYFT+LK LWD+L +TY+DL Q  S
Subjt:  SQRKAPRILFKIYQEIASHRQGNSSITSYFTKLKELWDQLAKTYSDLPQYSS

A0A6J1C6U3 uncharacterized protein LOC111008934 isoform X12.5e-0869.23Show/hide
Query:  SQRKAPRILFKIYQEIASHRQGNSSITSYFTKLKELWDQLAKTYSDLPQYSS
        SQ   PRI F+IY++IASHRQGNSSITSYFT+LK LWD+L +TY+DL Q  S
Subjt:  SQRKAPRILFKIYQEIASHRQGNSSITSYFTKLKELWDQLAKTYSDLPQYSS

A0A6J1C7L7 uncharacterized protein LOC1110089863.8e-0968.42Show/hide
Query:  KEEFGSQRKAPRILFKIYQEIASHRQGNSSITSYFTKLKELWDQLAKTYSDLPQYSS
        KEE   Q  A RIL +IY++IASHRQGNSSITSYFTKL+ LW++L +TYSDLPQ  S
Subjt:  KEEFGSQRKAPRILFKIYQEIASHRQGNSSITSYFTKLKELWDQLAKTYSDLPQYSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCCCAACAGATCGAGATCCTCGCGGGCAACGGGAAAGAAGAAGACAGCGCCGCCCAATAATCAGGAGGAGCAACAAAGTTGGAGAAGAAATTACACTCAAAGAGC
CACCAAAAGAGCTTCAAATTCTTCAGGTCTCCACTTACCAAAATCCACTTTAAAGATCGCCTTCTCAGGCCGACGCGAACAGAACAACCTCCAAATCCCAACACTAAAAT
CGCCACAACGAAATCATTTACGCTTTCAAACAGCTAGCAATTTAAAAGGTGGGTTTAGCTTTAATTCGTCAAGATCCCTTAGTGGGAATCGTAAATATTTTGATTCTCCA
AATGCTTCTCCCAAGCCTTTCCAAAGCTTAGGTAGAAAGGAAGAATTTGGTTCTCAAAGGAAGGCTCCAAGAATATTATTTAAAATTTACCAGGAAATTGCATCTCATCG
TCAAGGAAACTCATCTATTACATCTTACTTCACAAAGCTCAAAGAATTATGGGATCAACTTGCAAAAACCTATAGTGATTTGCCTCAATATTCATCCGATGCAATTGAGA
TGATCGATGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCCCAACAGATCGAGATCCTCGCGGGCAACGGGAAAGAAGAAGACAGCGCCGCCCAATAATCAGGAGGAGCAACAAAGTTGGAGAAGAAATTACACTCAAAGAGC
CACCAAAAGAGCTTCAAATTCTTCAGGTCTCCACTTACCAAAATCCACTTTAAAGATCGCCTTCTCAGGCCGACGCGAACAGAACAACCTCCAAATCCCAACACTAAAAT
CGCCACAACGAAATCATTTACGCTTTCAAACAGCTAGCAATTTAAAAGGTGGGTTTAGCTTTAATTCGTCAAGATCCCTTAGTGGGAATCGTAAATATTTTGATTCTCCA
AATGCTTCTCCCAAGCCTTTCCAAAGCTTAGGTAGAAAGGAAGAATTTGGTTCTCAAAGGAAGGCTCCAAGAATATTATTTAAAATTTACCAGGAAATTGCATCTCATCG
TCAAGGAAACTCATCTATTACATCTTACTTCACAAAGCTCAAAGAATTATGGGATCAACTTGCAAAAACCTATAGTGATTTGCCTCAATATTCATCCGATGCAATTGAGA
TGATCGATGAGTGA
Protein sequenceShow/hide protein sequence
MSPNRSRSSRATGKKKTAPPNNQEEQQSWRRNYTQRATKRASNSSGLHLPKSTLKIAFSGRREQNNLQIPTLKSPQRNHLRFQTASNLKGGFSFNSSRSLSGNRKYFDSP
NASPKPFQSLGRKEEFGSQRKAPRILFKIYQEIASHRQGNSSITSYFTKLKELWDQLAKTYSDLPQYSSDAIEMIDE