; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G005610 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G005610
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionserine/arginine repetitive matrix protein 1-like
Genome locationchr02:4932946..4933749
RNA-Seq ExpressionLsi02G005610
SyntenyLsi02G005610
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055390.1 uncharacterized protein E6C27_scaffold80G002350 [Cucumis melo var. makuwa]7.8e-4253.6Show/hide
Query:  MTAIRGLMSPRRSSRSRA-GGKKKTAPPNPEEQQSWRRTDTQIATNSKRRNNLGPPNSSGIHLPKSTLK-IASSRRRTEQPPNPNTKIAT---KNSFGRS
        M  IRG+M PR S  SR+  G + TAPP+PEEQQ  R  DT+IAT+ K+RN+L    SSGI  P+  LK I +S  +T+QPPNP+ KI T     S   S
Subjt:  MTAIRGLMSPRRSSRSRA-GGKKKTAPPNPEEQQSWRRTDTQIATNSKRRNNLGPPNSSGIHLPKSTLK-IASSRRRTEQPPNPNTKIAT---KNSFGRS

Query:  NSNLKGGFGFSSSRSLGGSRKYFDSPNASPKPYRSLGTKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQYSSDAI
         SNLK G   +         K+  SPN SP        K++   S+S A  IL KIY EIA HRQGNSSITSYFTKLK LWDQLAK Y D  PQYSSDAI
Subjt:  NSNLKGGFGFSSSRSLGGSRKYFDSPNASPKPYRSLGTKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQYSSDAI

Query:  EMLSEHMEREKVIQFLVGLNDS
         MLSEHMEREK++  +   NDS
Subjt:  EMLSEHMEREKVIQFLVGLNDS

TYJ99320.1 hypothetical protein E5676_scaffold248G005340 [Cucumis melo var. makuwa]2.1e-6360.77Show/hide
Query:  MTAIRGLMSPRRSSRSRA-GGKKKTAPPNPEEQQSWRRTDTQIATNSKRRNNLGPPNSSGIHLPKSTLK-IASSRRRTEQPPNPNTKIAT---KNSFGRS
        M  IRG+M PR S  SR+  G + TAPP+PEEQQ  R  DT+IAT+ K+RN+L    SSGI  P+  LK I +S  +T+QPPNP+TKI T     S   S
Subjt:  MTAIRGLMSPRRSSRSRA-GGKKKTAPPNPEEQQSWRRTDTQIATNSKRRNNLGPPNSSGIHLPKSTLK-IASSRRRTEQPPNPNTKIAT---KNSFGRS

Query:  NSNLKGGFGFSSSRSLGGSRKYFDSPNASPKPYRSLGTKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQYSSDAI
         SNLK G   +         K+  SPN SP        K++   S+S A  IL KIY EIA HRQGNSSITSYFTKLK LWDQLAK Y D  PQYSSDAI
Subjt:  NSNLKGGFGFSSSRSLGGSRKYFDSPNASPKPYRSLGTKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQYSSDAI

Query:  EMLSEHMEREKVIQFLVGLNDSYSSICSKILLRRPFPSVDIAFSVIIRKENRRKLVISSE
         MLSEHMEREKVIQFLVGLNDSYSS CSKIL  RPFP+VD AFSVIIRKENRRKLV  S+
Subjt:  EMLSEHMEREKVIQFLVGLNDSYSSICSKILLRRPFPSVDIAFSVIIRKENRRKLVISSE

XP_022137024.1 uncharacterized protein LOC111008588 [Momordica charantia]1.9e-2738Show/hide
Query:  KKTAP------PNPEEQQSWRRTDTQIATNSKRRNNLGPPNS-----SGIHLPKSTLKIASSRRRTEQPPNPNTKIATKNSFGRSNSNLKGGFGFSSSRS
        K TAP      PNP +  + ++ DT+            P        +G+  P+    I+   + T   P P   IA   S  RS+S        S    
Subjt:  KKTAP------PNPEEQQSWRRTDTQIATNSKRRNNLGPPNS-----SGIHLPKSTLKIASSRRRTEQPPNPNTKIATKNSFGRSNSNLKGGFGFSSSRS

Query:  LGGSRKYFDSPNASP------------------------------------KPYRSLG--TKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKL
          GS ++ D  N SP                                      Y S+G  T EE F  +S A RI F+IY +IASHRQ NSS+TSYFTKL
Subjt:  LGGSRKYFDSPNASP------------------------------------KPYRSLG--TKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKL

Query:  KVLWDQLAKTYTDNLPQ-YSSDAIEMLSEHMEREKVIQFLVGLNDSYSSICSKILLRRPFPSVDIAFSVIIRKENRRKLVISSE----EVVEKKISVQND
        K+LWD+L +TY+D++PQ  S  A+E LS H+EREKV+QFL+GLN+SYS+IC +ILL +PFP+++ A+S+IIR+E R +LV S E    +V+E K  +QND
Subjt:  KVLWDQLAKTYTDNLPQ-YSSDAIEMLSEHMEREKVIQFLVGLNDSYSSICSKILLRRPFPSVDIAFSVIIRKENRRKLVISSE----EVVEKKISVQND

XP_022954810.1 serine/arginine repetitive matrix protein 1-like [Cucurbita moschata]5.4e-2755.47Show/hide
Query:  YRSLG--TKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSICSKI
        Y SL   TKEE   S+      +F+IY EIASH QGNSSITSY TKLK LWD+L + Y D  P+ S  + E  SE +EREKV+QFL+GLNDSYS+IC++I
Subjt:  YRSLG--TKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSICSKI

Query:  LLRRPFPSVDIAFSVIIRKENRRKLVISSEEVVEKKI
        L  +PFP+V+ A   I+R+E RR+LV+S E V  K I
Subjt:  LLRRPFPSVDIAFSVIIRKENRRKLVISSEEVVEKKI

XP_038895287.1 hybrid signal transduction histidine kinase L-like isoform X3 [Benincasa hispida]4.1e-2735.02Show/hide
Query:  MSPRRSSRSRAGGKKKTAPPNPEEQQSWRRTDTQIATNSKRRNNLGPPNSSGIHLPKSTLKIASSRRRTEQPPNPNTKIATKNSFGRSNSNLKGGFGFSS
        ++P +S+      + KTA  NP  Q+   +  T           +  P+S     P++   +    R     P PN+K   KN     +       G  S
Subjt:  MSPRRSSRSRAGGKKKTAPPNPEEQQSWRRTDTQIATNSKRRNNLGPPNSSGIHLPKSTLKIASSRRRTEQPPNPNTKIATKNSFGRSNSNLKGGFGFSS

Query:  SRSLGGSRKYFDSPNASPKP------------------------------------------YRSLGTKEELFGSESKAQRILFKIYMEIASHRQGNSSI
          S  G  KYF S N SP                                            Y S+G+  +   S       +F+IY EIA HRQ NSSI
Subjt:  SRSLGGSRKYFDSPNASPKP------------------------------------------YRSLGTKEELFGSESKAQRILFKIYMEIASHRQGNSSI

Query:  TSYFTKLKVLWDQLAKTYTDNLPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSICSKILLRRPFPSVDIAFSVIIRKENRRKLVISSEEVVEKKI
        TSYFTKL+ LWD+LA   TD L      A E LSE+MEREKV+QFLVGLNDSYS IC++ILL  PFP+++ A+S +IR+E  R+LV+  E V  K I
Subjt:  TSYFTKLKVLWDQLAKTYTDNLPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSICSKILLRRPFPSVDIAFSVIIRKENRRKLVISSEEVVEKKI

TrEMBL top hitse value%identityAlignment
A0A5A7UJM8 Uncharacterized protein3.8e-4253.6Show/hide
Query:  MTAIRGLMSPRRSSRSRA-GGKKKTAPPNPEEQQSWRRTDTQIATNSKRRNNLGPPNSSGIHLPKSTLK-IASSRRRTEQPPNPNTKIAT---KNSFGRS
        M  IRG+M PR S  SR+  G + TAPP+PEEQQ  R  DT+IAT+ K+RN+L    SSGI  P+  LK I +S  +T+QPPNP+ KI T     S   S
Subjt:  MTAIRGLMSPRRSSRSRA-GGKKKTAPPNPEEQQSWRRTDTQIATNSKRRNNLGPPNSSGIHLPKSTLK-IASSRRRTEQPPNPNTKIAT---KNSFGRS

Query:  NSNLKGGFGFSSSRSLGGSRKYFDSPNASPKPYRSLGTKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQYSSDAI
         SNLK G   +         K+  SPN SP        K++   S+S A  IL KIY EIA HRQGNSSITSYFTKLK LWDQLAK Y D  PQYSSDAI
Subjt:  NSNLKGGFGFSSSRSLGGSRKYFDSPNASPKPYRSLGTKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQYSSDAI

Query:  EMLSEHMEREKVIQFLVGLNDS
         MLSEHMEREK++  +   NDS
Subjt:  EMLSEHMEREKVIQFLVGLNDS

A0A5D3BHR0 Uncharacterized protein1.0e-6360.77Show/hide
Query:  MTAIRGLMSPRRSSRSRA-GGKKKTAPPNPEEQQSWRRTDTQIATNSKRRNNLGPPNSSGIHLPKSTLK-IASSRRRTEQPPNPNTKIAT---KNSFGRS
        M  IRG+M PR S  SR+  G + TAPP+PEEQQ  R  DT+IAT+ K+RN+L    SSGI  P+  LK I +S  +T+QPPNP+TKI T     S   S
Subjt:  MTAIRGLMSPRRSSRSRA-GGKKKTAPPNPEEQQSWRRTDTQIATNSKRRNNLGPPNSSGIHLPKSTLK-IASSRRRTEQPPNPNTKIAT---KNSFGRS

Query:  NSNLKGGFGFSSSRSLGGSRKYFDSPNASPKPYRSLGTKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQYSSDAI
         SNLK G   +         K+  SPN SP        K++   S+S A  IL KIY EIA HRQGNSSITSYFTKLK LWDQLAK Y D  PQYSSDAI
Subjt:  NSNLKGGFGFSSSRSLGGSRKYFDSPNASPKPYRSLGTKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQYSSDAI

Query:  EMLSEHMEREKVIQFLVGLNDSYSSICSKILLRRPFPSVDIAFSVIIRKENRRKLVISSE
         MLSEHMEREKVIQFLVGLNDSYSS CSKIL  RPFP+VD AFSVIIRKENRRKLV  S+
Subjt:  EMLSEHMEREKVIQFLVGLNDSYSSICSKILLRRPFPSVDIAFSVIIRKENRRKLVISSE

A0A6J1C5Z8 uncharacterized protein LOC1110085889.0e-2838Show/hide
Query:  KKTAP------PNPEEQQSWRRTDTQIATNSKRRNNLGPPNS-----SGIHLPKSTLKIASSRRRTEQPPNPNTKIATKNSFGRSNSNLKGGFGFSSSRS
        K TAP      PNP +  + ++ DT+            P        +G+  P+    I+   + T   P P   IA   S  RS+S        S    
Subjt:  KKTAP------PNPEEQQSWRRTDTQIATNSKRRNNLGPPNS-----SGIHLPKSTLKIASSRRRTEQPPNPNTKIATKNSFGRSNSNLKGGFGFSSSRS

Query:  LGGSRKYFDSPNASP------------------------------------KPYRSLG--TKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKL
          GS ++ D  N SP                                      Y S+G  T EE F  +S A RI F+IY +IASHRQ NSS+TSYFTKL
Subjt:  LGGSRKYFDSPNASP------------------------------------KPYRSLG--TKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKL

Query:  KVLWDQLAKTYTDNLPQ-YSSDAIEMLSEHMEREKVIQFLVGLNDSYSSICSKILLRRPFPSVDIAFSVIIRKENRRKLVISSE----EVVEKKISVQND
        K+LWD+L +TY+D++PQ  S  A+E LS H+EREKV+QFL+GLN+SYS+IC +ILL +PFP+++ A+S+IIR+E R +LV S E    +V+E K  +QND
Subjt:  KVLWDQLAKTYTDNLPQ-YSSDAIEMLSEHMEREKVIQFLVGLNDSYSSICSKILLRRPFPSVDIAFSVIIRKENRRKLVISSE----EVVEKKISVQND

A0A6J1C6Z1 uncharacterized protein LOC1110089783.9e-2354.03Show/hide
Query:  YRSLGTKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQ-YSSDAIEMLSEHMEREKVIQFLVGLNDSYSSICSKIL
        Y+ +G+  +   S       +F+IY   ASHRQ +SS+TSYF KLK+LWDQL + Y+D LPQ YS  A + LSEH+EREKVIQFLVGLNDSYS+I S+IL
Subjt:  YRSLGTKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQ-YSSDAIEMLSEHMEREKVIQFLVGLNDSYSSICSKIL

Query:  LRRPFPSVDIAFSVIIRKENRRKL
          RP P+V+ A+ + I++E +R L
Subjt:  LRRPFPSVDIAFSVIIRKENRRKL

A0A6J1GTG4 serine/arginine repetitive matrix protein 1-like2.6e-2755.47Show/hide
Query:  YRSLG--TKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSICSKI
        Y SL   TKEE   S+      +F+IY EIASH QGNSSITSY TKLK LWD+L + Y D  P+ S  + E  SE +EREKV+QFL+GLNDSYS+IC++I
Subjt:  YRSLG--TKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSICSKI

Query:  LLRRPFPSVDIAFSVIIRKENRRKLVISSEEVVEKKI
        L  +PFP+V+ A   I+R+E RR+LV+S E V  K I
Subjt:  LLRRPFPSVDIAFSVIIRKENRRKLVISSEEVVEKKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21280.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).5.6e-0627.52Show/hide
Query:  LFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQ-----YSSDAIEMLSEHMEREKVIQFLVG--LNDSYSSICSKILLRRPFPSVDIAFSV
        ++++   +A+ RQG  S+  YF KL  +W +L++ Y   +P+      + +  +   E  E+E+  +FL+G  LN  + ++ +KI+ ++P PS+  AF++
Subjt:  LFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQ-----YSSDAIEMLSEHMEREKVIQFLVG--LNDSYSSICSKILLRRPFPSVDIAFSV

Query:  IIRKENRRK
        +   E+  K
Subjt:  IIRKENRRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGCAATAAGAGGGCTTATGAGTCCCCGAAGATCCTCACGGTCACGCGCAGGGGGAAAGAAGAAGACAGCGCCGCCCAATCCGGAGGAGCAACAAAGTTGGAGAAG
GACAGACACCCAAATAGCCACCAACTCAAAACGAAGAAACAACCTCGGACCTCCAAATTCTTCAGGTATCCACTTACCAAAATCCACTTTAAAGATCGCCTCCTCACGCC
GACGAACAGAACAACCCCCAAATCCCAACACTAAAATCGCCACAAAAAATTCATTTGGGCGTTCAAACAGCAATTTAAAAGGTGGGTTTGGCTTTAGTTCGTCAAGATCC
CTTGGTGGGAGTCGTAAATATTTTGATTCTCCAAATGCTTCTCCCAAGCCATACCGGAGCTTAGGTACAAAAGAAGAATTATTTGGTTCTGAAAGCAAGGCTCAAAGAAT
ATTATTTAAAATTTACATGGAAATTGCATCTCATCGTCAAGGAAACTCATCTATTACATCTTACTTCACAAAGCTCAAGGTATTATGGGATCAACTTGCAAAAACCTATA
CTGACAATTTGCCTCAATATTCATCAGATGCAATTGAGATGCTGAGTGAACATATGGAAAGAGAAAAGGTAATACAATTTCTTGTTGGACTAAATGATTCTTATTCCTCC
ATTTGTTCTAAAATACTTCTTAGGAGGCCATTTCCATCGGTGGACATAGCTTTTTCTGTAATCATTCGAAAAGAAAACCGTAGGAAATTGGTAATTTCGTCAGAAGAAGT
TGTTGAGAAAAAAATAAGTGTGCAAAACGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGGCAATAAGAGGGCTTATGAGTCCCCGAAGATCCTCACGGTCACGCGCAGGGGGAAAGAAGAAGACAGCGCCGCCCAATCCGGAGGAGCAACAAAGTTGGAGAAG
GACAGACACCCAAATAGCCACCAACTCAAAACGAAGAAACAACCTCGGACCTCCAAATTCTTCAGGTATCCACTTACCAAAATCCACTTTAAAGATCGCCTCCTCACGCC
GACGAACAGAACAACCCCCAAATCCCAACACTAAAATCGCCACAAAAAATTCATTTGGGCGTTCAAACAGCAATTTAAAAGGTGGGTTTGGCTTTAGTTCGTCAAGATCC
CTTGGTGGGAGTCGTAAATATTTTGATTCTCCAAATGCTTCTCCCAAGCCATACCGGAGCTTAGGTACAAAAGAAGAATTATTTGGTTCTGAAAGCAAGGCTCAAAGAAT
ATTATTTAAAATTTACATGGAAATTGCATCTCATCGTCAAGGAAACTCATCTATTACATCTTACTTCACAAAGCTCAAGGTATTATGGGATCAACTTGCAAAAACCTATA
CTGACAATTTGCCTCAATATTCATCAGATGCAATTGAGATGCTGAGTGAACATATGGAAAGAGAAAAGGTAATACAATTTCTTGTTGGACTAAATGATTCTTATTCCTCC
ATTTGTTCTAAAATACTTCTTAGGAGGCCATTTCCATCGGTGGACATAGCTTTTTCTGTAATCATTCGAAAAGAAAACCGTAGGAAATTGGTAATTTCGTCAGAAGAAGT
TGTTGAGAAAAAAATAAGTGTGCAAAACGATTAG
Protein sequenceShow/hide protein sequence
MTAIRGLMSPRRSSRSRAGGKKKTAPPNPEEQQSWRRTDTQIATNSKRRNNLGPPNSSGIHLPKSTLKIASSRRRTEQPPNPNTKIATKNSFGRSNSNLKGGFGFSSSRS
LGGSRKYFDSPNASPKPYRSLGTKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSS
ICSKILLRRPFPSVDIAFSVIIRKENRRKLVISSEEVVEKKISVQND