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Lsi02G005760 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G005760
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionp55
Genome locationchr02:5147210..5147731
RNA-Seq ExpressionLsi02G005760
SyntenyLsi02G005760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056835.1 p55 [Cucumis melo var. makuwa]1.3e-1843.37Show/hide
Query:  QVINKALICPPSSPSSKKPAAKFTHSSSDQYFQAEPHTPEVVLGTKRPAPISPGDSSRHEPPAQ-RRRTNNSEGSSSGVPMEDLIGKVEEMVKMLKRVAG
        Q+++ + +  PSSPS    +     ++SD   +  P TPE   G K     S  + S  +   + + +T+ + GSS  VP++DLI +++EMV MLK    
Subjt:  QVINKALICPPSSPSSKKPAAKFTHSSSDQYFQAEPHTPEVVLGTKRPAPISPGDSSRHEPPAQ-RRRTNNSEGSSSGVPMEDLIGKVEEMVKMLKRVAG

Query:  NKDLVSDPLLGCFVSAQTLLMACTAELISRSTTKAKPLDHQSSEGSINYSSIT------DGSGEKK
           LV+ PLLGCFVSAQTLLMAC  EL+S S  K+K L HQ SE S+NYSS T      DG+GEKK
Subjt:  NKDLVSDPLLGCFVSAQTLLMACTAELISRSTTKAKPLDHQSSEGSINYSSIT------DGSGEKK

KAA0056836.1 p55 [Cucumis melo var. makuwa]2.0e-3859.24Show/hide
Query:  GEYNQVINKALICPPSSPSSKKPAAKFTHSSSDQYFQAEPHTPEVVLGTKRPAPISPGDSSRHE-PPAQRRRTNNSE-GSSSGVPMEDLIGKVEEMVKML
        GE+N VI+ A+  PP SP  +K A K T SSS      EPHTP+ VLG KRPA +SP D S H+ PP Q+ +T+N+E  SSSGVPM+DLIGKVE+M+KML
Subjt:  GEYNQVINKALICPPSSPSSKKPAAKFTHSSSDQYFQAEPHTPEVVLGTKRPAPISPGDSSRHE-PPAQRRRTNNSE-GSSSGVPMEDLIGKVEEMVKML

Query:  KRVAGNKD-LVSDPLLGCFVSAQTLLMACTAELISRSTTKAK-PLDHQSSEGSINYSSIT---------DGSGEKKRIQKSKST
        KRV    D LVSDPLL CFVSAQTLLMACTAEL+S+ST K K PL HQ S+ SINY S T          GSGE+K  +K KS+
Subjt:  KRVAGNKD-LVSDPLLGCFVSAQTLLMACTAELISRSTTKAK-PLDHQSSEGSINYSSIT---------DGSGEKKRIQKSKST

KAG6584107.1 hypothetical protein SDJN03_20039, partial [Cucurbita argyrosperma subsp. sororia]4.9e-1339.86Show/hide
Query:  MGEYNQVINKALICPPSSPSSKKPAAKFTHSSSDQYFQAEPHTPEVVLGTKRPAPISPGDSSRHEPPAQRRRTN--------NSEGSSSGVPMEDLIGKV
        MG  + VI++ +   P SP   +P+       ++      P TP +    KR AP SP  +  HEPP QRRR +          +   S +P+  LIG +
Subjt:  MGEYNQVINKALICPPSSPSSKKPAAKFTHSSSDQYFQAEPHTPEVVLGTKRPAPISPGDSSRHEPPAQRRRTN--------NSEGSSSGVPMEDLIGKV

Query:  EEMVKMLKRVAGNKDLVSDPLLGCFVSAQTLLMACTAELISRS
        EE+VK LKRV G + L+ DPLLGC VS+QT +M C A LISR+
Subjt:  EEMVKMLKRVAGNKDLVSDPLLGCFVSAQTLLMACTAELISRS

KGN64496.1 hypothetical protein Csa_013860 [Cucumis sativus]2.9e-3761.85Show/hide
Query:  GEYNQVINKALICPPSSPSSKKPAAKFTHSSSDQYFQAEPHTPEVVLGTKRPAPISPGDSSRHE-PPAQRRRTNNS-EGSSSGVPMEDLIGKVEEMVKML
        GE N  +   +  PPSSP SKK   KF   SS      EP TP+ V G KRPAP+SP D  +H+ PP Q+R+T+N+ EGSSS VPM+DLI KVE+MVKML
Subjt:  GEYNQVINKALICPPSSPSSKKPAAKFTHSSSDQYFQAEPHTPEVVLGTKRPAPISPGDSSRHE-PPAQRRRTNNS-EGSSSGVPMEDLIGKVEEMVKML

Query:  KRVAGNKD-LVSDPLLGCFVSAQTLLMACTAELISRSTTKAKPLDHQSSEGSINYSSIT---DGSGEKKRIQK
        KRV   KD LVSDPLL CFVSAQ LL ACTAELISRST KAKPL HQ S+ SINY S T    GSGE K+I+K
Subjt:  KRVAGNKD-LVSDPLLGCFVSAQTLLMACTAELISRSTTKAKPLDHQSSEGSINYSSIT---DGSGEKKRIQK

XP_008440827.1 PREDICTED: uncharacterized protein LOC103485133 isoform X1 [Cucumis melo]1.3e-1843.37Show/hide
Query:  QVINKALICPPSSPSSKKPAAKFTHSSSDQYFQAEPHTPEVVLGTKRPAPISPGDSSRHEPPAQ-RRRTNNSEGSSSGVPMEDLIGKVEEMVKMLKRVAG
        Q+++ + +  PSSPS    +     ++SD   +  P TPE   G K     S  + S  +   + + +T+ + GSS  VP++DLI +++EMV MLK    
Subjt:  QVINKALICPPSSPSSKKPAAKFTHSSSDQYFQAEPHTPEVVLGTKRPAPISPGDSSRHEPPAQ-RRRTNNSEGSSSGVPMEDLIGKVEEMVKMLKRVAG

Query:  NKDLVSDPLLGCFVSAQTLLMACTAELISRSTTKAKPLDHQSSEGSINYSSIT------DGSGEKK
           LV+ PLLGCFVSAQTLLMAC  EL+S S  K+K L HQ SE S+NYSS T      DG+GEKK
Subjt:  NKDLVSDPLLGCFVSAQTLLMACTAELISRSTTKAKPLDHQSSEGSINYSSIT------DGSGEKK

TrEMBL top hitse value%identityAlignment
A0A0A0LRJ2 Uncharacterized protein1.5e-0751.02Show/hide
Query:  EGSSS-GVPMEDLIGKVEEMVKMLKRVAGNKD-LVSDPLLGCFVSAQTLLMACTAELISRSTTKAKPLDHQSSEGSINYSSIT----DGSGEKKRIQK
        EGSSS G   +DLI K+EE V+ +K V   KD LVS PLL CFV+AQTLL+ CT +L   ST      DHQ SE S+  SS T    D S E+ +I+K
Subjt:  EGSSS-GVPMEDLIGKVEEMVKMLKRVAGNKD-LVSDPLLGCFVSAQTLLMACTAELISRSTTKAKPLDHQSSEGSINYSSIT----DGSGEKKRIQK

A0A0A0LX14 p551.4e-3761.85Show/hide
Query:  GEYNQVINKALICPPSSPSSKKPAAKFTHSSSDQYFQAEPHTPEVVLGTKRPAPISPGDSSRHE-PPAQRRRTNNS-EGSSSGVPMEDLIGKVEEMVKML
        GE N  +   +  PPSSP SKK   KF   SS      EP TP+ V G KRPAP+SP D  +H+ PP Q+R+T+N+ EGSSS VPM+DLI KVE+MVKML
Subjt:  GEYNQVINKALICPPSSPSSKKPAAKFTHSSSDQYFQAEPHTPEVVLGTKRPAPISPGDSSRHE-PPAQRRRTNNS-EGSSSGVPMEDLIGKVEEMVKML

Query:  KRVAGNKD-LVSDPLLGCFVSAQTLLMACTAELISRSTTKAKPLDHQSSEGSINYSSIT---DGSGEKKRIQK
        KRV   KD LVSDPLL CFVSAQ LL ACTAELISRST KAKPL HQ S+ SINY S T    GSGE K+I+K
Subjt:  KRVAGNKD-LVSDPLLGCFVSAQTLLMACTAELISRSTTKAKPLDHQSSEGSINYSSIT---DGSGEKKRIQK

A0A1S3B2P2 uncharacterized protein LOC103485133 isoform X16.5e-1943.37Show/hide
Query:  QVINKALICPPSSPSSKKPAAKFTHSSSDQYFQAEPHTPEVVLGTKRPAPISPGDSSRHEPPAQ-RRRTNNSEGSSSGVPMEDLIGKVEEMVKMLKRVAG
        Q+++ + +  PSSPS    +     ++SD   +  P TPE   G K     S  + S  +   + + +T+ + GSS  VP++DLI +++EMV MLK    
Subjt:  QVINKALICPPSSPSSKKPAAKFTHSSSDQYFQAEPHTPEVVLGTKRPAPISPGDSSRHEPPAQ-RRRTNNSEGSSSGVPMEDLIGKVEEMVKMLKRVAG

Query:  NKDLVSDPLLGCFVSAQTLLMACTAELISRSTTKAKPLDHQSSEGSINYSSIT------DGSGEKK
           LV+ PLLGCFVSAQTLLMAC  EL+S S  K+K L HQ SE S+NYSS T      DG+GEKK
Subjt:  NKDLVSDPLLGCFVSAQTLLMACTAELISRSTTKAKPLDHQSSEGSINYSSIT------DGSGEKK

A0A5A7UTH3 p556.5e-1943.37Show/hide
Query:  QVINKALICPPSSPSSKKPAAKFTHSSSDQYFQAEPHTPEVVLGTKRPAPISPGDSSRHEPPAQ-RRRTNNSEGSSSGVPMEDLIGKVEEMVKMLKRVAG
        Q+++ + +  PSSPS    +     ++SD   +  P TPE   G K     S  + S  +   + + +T+ + GSS  VP++DLI +++EMV MLK    
Subjt:  QVINKALICPPSSPSSKKPAAKFTHSSSDQYFQAEPHTPEVVLGTKRPAPISPGDSSRHEPPAQ-RRRTNNSEGSSSGVPMEDLIGKVEEMVKMLKRVAG

Query:  NKDLVSDPLLGCFVSAQTLLMACTAELISRSTTKAKPLDHQSSEGSINYSSIT------DGSGEKK
           LV+ PLLGCFVSAQTLLMAC  EL+S S  K+K L HQ SE S+NYSS T      DG+GEKK
Subjt:  NKDLVSDPLLGCFVSAQTLLMACTAELISRSTTKAKPLDHQSSEGSINYSSIT------DGSGEKK

A0A5D3BJN2 p559.6e-3959.24Show/hide
Query:  GEYNQVINKALICPPSSPSSKKPAAKFTHSSSDQYFQAEPHTPEVVLGTKRPAPISPGDSSRHE-PPAQRRRTNNSE-GSSSGVPMEDLIGKVEEMVKML
        GE+N VI+ A+  PP SP  +K A K T SSS      EPHTP+ VLG KRPA +SP D S H+ PP Q+ +T+N+E  SSSGVPM+DLIGKVE+M+KML
Subjt:  GEYNQVINKALICPPSSPSSKKPAAKFTHSSSDQYFQAEPHTPEVVLGTKRPAPISPGDSSRHE-PPAQRRRTNNSE-GSSSGVPMEDLIGKVEEMVKML

Query:  KRVAGNKD-LVSDPLLGCFVSAQTLLMACTAELISRSTTKAK-PLDHQSSEGSINYSSIT---------DGSGEKKRIQKSKST
        KRV    D LVSDPLL CFVSAQTLLMACTAEL+S+ST K K PL HQ S+ SINY S T          GSGE+K  +K KS+
Subjt:  KRVAGNKD-LVSDPLLGCFVSAQTLLMACTAELISRSTTKAK-PLDHQSSEGSINYSSIT---------DGSGEKKRIQKSKST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAGTACAACCAAGTTATAAACAAAGCACTCATTTGTCCCCCCTCATCGCCCAGTAGTAAAAAACCTGCAGCCAAATTCACTCACAGCTCCTCCGATCAGTACTT
TCAAGCAGAGCCACATACTCCAGAAGTAGTCCTTGGTACGAAGAGGCCAGCGCCGATTAGCCCCGGCGACAGCTCCCGACATGAGCCGCCAGCCCAAAGGCGACGAACCA
ACAACTCGGAGGGTTCGAGCTCGGGCGTGCCAATGGAAGATCTGATAGGGAAAGTGGAGGAAATGGTTAAGATGTTGAAAAGGGTGGCAGGGAATAAGGATTTGGTGAGT
GATCCTTTGTTGGGTTGCTTTGTGTCTGCGCAGACTCTGCTCATGGCTTGTACTGCGGAGCTTATATCCAGATCAACCACAAAAGCAAAGCCACTAGATCATCAGAGCAG
TGAAGGTTCTATTAATTACAGTTCTATTACTGATGGAAGTGGAGAGAAAAAGAGGATTCAAAAGTCTAAATCCACCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAGTACAACCAAGTTATAAACAAAGCACTCATTTGTCCCCCCTCATCGCCCAGTAGTAAAAAACCTGCAGCCAAATTCACTCACAGCTCCTCCGATCAGTACTT
TCAAGCAGAGCCACATACTCCAGAAGTAGTCCTTGGTACGAAGAGGCCAGCGCCGATTAGCCCCGGCGACAGCTCCCGACATGAGCCGCCAGCCCAAAGGCGACGAACCA
ACAACTCGGAGGGTTCGAGCTCGGGCGTGCCAATGGAAGATCTGATAGGGAAAGTGGAGGAAATGGTTAAGATGTTGAAAAGGGTGGCAGGGAATAAGGATTTGGTGAGT
GATCCTTTGTTGGGTTGCTTTGTGTCTGCGCAGACTCTGCTCATGGCTTGTACTGCGGAGCTTATATCCAGATCAACCACAAAAGCAAAGCCACTAGATCATCAGAGCAG
TGAAGGTTCTATTAATTACAGTTCTATTACTGATGGAAGTGGAGAGAAAAAGAGGATTCAAAAGTCTAAATCCACCAATTAA
Protein sequenceShow/hide protein sequence
MGEYNQVINKALICPPSSPSSKKPAAKFTHSSSDQYFQAEPHTPEVVLGTKRPAPISPGDSSRHEPPAQRRRTNNSEGSSSGVPMEDLIGKVEEMVKMLKRVAGNKDLVS
DPLLGCFVSAQTLLMACTAELISRSTTKAKPLDHQSSEGSINYSSITDGSGEKKRIQKSKSTN