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Lsi02G005810 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G005810
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAnkyrin repeat family protein
Genome locationchr02:5200587..5200895
RNA-Seq ExpressionLsi02G005810
SyntenyLsi02G005810
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34066.1 ankyrin repeat family protein [Cucumis melo subsp. melo]2.7e-1157.32Show/hide
Query:  MMHRKTQPASSSNRVERTVSSSDDHQVIDMIGIDVYCTSLSTQMNVKEDQHEPMIGGNDKPFHHKMSIKWATIRTKLHCFKI
        MMHR T    SSN  E T  SSDDH  I+ IG D Y  S S Q+NVKE++ +PM+GG+DK  HHKM IKWA  R KLH F I
Subjt:  MMHRKTQPASSSNRVERTVSSSDDHQVIDMIGIDVYCTSLSTQMNVKEDQHEPMIGGNDKPFHHKMSIKWATIRTKLHCFKI

KAG6584102.1 hypothetical protein SDJN03_20034, partial [Cucurbita argyrosperma subsp. sororia]1.7e-0553.85Show/hide
Query:  TVSSSDDHQVIDMIGIDVYCTSLSTQMNVKEDQHEPMIGGNDKPFHHKMSIKWATIRTKLHCFKI
        T+ SSDD+   D+ G D Y TS S Q+NVKEDQH+P+I  +DK  HHKM ++ A  RTK H F I
Subjt:  TVSSSDDHQVIDMIGIDVYCTSLSTQMNVKEDQHEPMIGGNDKPFHHKMSIKWATIRTKLHCFKI

XP_008440886.1 PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis melo]2.7e-1157.32Show/hide
Query:  MMHRKTQPASSSNRVERTVSSSDDHQVIDMIGIDVYCTSLSTQMNVKEDQHEPMIGGNDKPFHHKMSIKWATIRTKLHCFKI
        MMHR T    SSN  E T  SSDDH  I+ IG D Y  S S Q+NVKE++ +PM+GG+DK  HHKM IKWA  R KLH F I
Subjt:  MMHRKTQPASSSNRVERTVSSSDDHQVIDMIGIDVYCTSLSTQMNVKEDQHEPMIGGNDKPFHHKMSIKWATIRTKLHCFKI

XP_022923771.1 uncharacterized protein LOC111431379 [Cucurbita moschata]2.9e-0553.42Show/hide
Query:  SSSNRVERTVSSSDDHQVIDMIGIDVYCTSLSTQMNVKEDQHEPMIGGNDKPFHHKMSIKWATIRTKLHCFKI
        SSSN  +  V SSDD+  ID+ G D Y  S STQ N+KEDQ +P+I  NDK  HHKM +  A  RTK H F I
Subjt:  SSSNRVERTVSSSDDHQVIDMIGIDVYCTSLSTQMNVKEDQHEPMIGGNDKPFHHKMSIKWATIRTKLHCFKI

XP_023520202.1 uncharacterized protein LOC111783506 [Cucurbita pepo subsp. pepo]1.7e-0553.85Show/hide
Query:  TVSSSDDHQVIDMIGIDVYCTSLSTQMNVKEDQHEPMIGGNDKPFHHKMSIKWATIRTKLHCFKI
        T+ SSDD+   D+ G D Y TS S Q+NVKEDQH+P+I  +DK  HHKM ++ A  RTK H F I
Subjt:  TVSSSDDHQVIDMIGIDVYCTSLSTQMNVKEDQHEPMIGGNDKPFHHKMSIKWATIRTKLHCFKI

TrEMBL top hitse value%identityAlignment
A0A1S3B1Q1 ankyrin repeat-containing protein At5g02620-like1.3e-1157.32Show/hide
Query:  MMHRKTQPASSSNRVERTVSSSDDHQVIDMIGIDVYCTSLSTQMNVKEDQHEPMIGGNDKPFHHKMSIKWATIRTKLHCFKI
        MMHR T    SSN  E T  SSDDH  I+ IG D Y  S S Q+NVKE++ +PM+GG+DK  HHKM IKWA  R KLH F I
Subjt:  MMHRKTQPASSSNRVERTVSSSDDHQVIDMIGIDVYCTSLSTQMNVKEDQHEPMIGGNDKPFHHKMSIKWATIRTKLHCFKI

A0A5A7UP27 Ankyrin repeat-containing protein1.3e-1157.32Show/hide
Query:  MMHRKTQPASSSNRVERTVSSSDDHQVIDMIGIDVYCTSLSTQMNVKEDQHEPMIGGNDKPFHHKMSIKWATIRTKLHCFKI
        MMHR T    SSN  E T  SSDDH  I+ IG D Y  S S Q+NVKE++ +PM+GG+DK  HHKM IKWA  R KLH F I
Subjt:  MMHRKTQPASSSNRVERTVSSSDDHQVIDMIGIDVYCTSLSTQMNVKEDQHEPMIGGNDKPFHHKMSIKWATIRTKLHCFKI

A0A6J1E7M8 uncharacterized protein LOC1114313791.4e-0553.42Show/hide
Query:  SSSNRVERTVSSSDDHQVIDMIGIDVYCTSLSTQMNVKEDQHEPMIGGNDKPFHHKMSIKWATIRTKLHCFKI
        SSSN  +  V SSDD+  ID+ G D Y  S STQ N+KEDQ +P+I  NDK  HHKM +  A  RTK H F I
Subjt:  SSSNRVERTVSSSDDHQVIDMIGIDVYCTSLSTQMNVKEDQHEPMIGGNDKPFHHKMSIKWATIRTKLHCFKI

E5GC67 Ankyrin repeat family protein1.3e-1157.32Show/hide
Query:  MMHRKTQPASSSNRVERTVSSSDDHQVIDMIGIDVYCTSLSTQMNVKEDQHEPMIGGNDKPFHHKMSIKWATIRTKLHCFKI
        MMHR T    SSN  E T  SSDDH  I+ IG D Y  S S Q+NVKE++ +PM+GG+DK  HHKM IKWA  R KLH F I
Subjt:  MMHRKTQPASSSNRVERTVSSSDDHQVIDMIGIDVYCTSLSTQMNVKEDQHEPMIGGNDKPFHHKMSIKWATIRTKLHCFKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCACCGGAAGACGCAACCGGCTTCTTCATCAAATCGGGTGGAAAGGACGGTTTCCAGTTCTGACGACCACCAGGTAATTGATATGATCGGCATTGACGTTTACTG
CACTTCATTGTCGACACAAATGAATGTGAAGGAAGATCAGCATGAGCCGATGATTGGTGGTAACGATAAACCTTTCCATCACAAGATGAGTATCAAATGGGCTACAATAA
GGACTAAACTTCACTGCTTCAAAATTCTCGGCGGTTGTAAGTGCTTTTTCTCTTCCTATTTTAATCTCCAATATACATTAGGGTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGCACCGGAAGACGCAACCGGCTTCTTCATCAAATCGGGTGGAAAGGACGGTTTCCAGTTCTGACGACCACCAGGTAATTGATATGATCGGCATTGACGTTTACTG
CACTTCATTGTCGACACAAATGAATGTGAAGGAAGATCAGCATGAGCCGATGATTGGTGGTAACGATAAACCTTTCCATCACAAGATGAGTATCAAATGGGCTACAATAA
GGACTAAACTTCACTGCTTCAAAATTCTCGGCGGTTGTAAGTGCTTTTTCTCTTCCTATTTTAATCTCCAATATACATTAGGGTTATAA
Protein sequenceShow/hide protein sequence
MMHRKTQPASSSNRVERTVSSSDDHQVIDMIGIDVYCTSLSTQMNVKEDQHEPMIGGNDKPFHHKMSIKWATIRTKLHCFKILGGCKCFFSSYFNLQYTLGL