; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G005890 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G005890
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionglycine-rich protein 5-like
Genome locationchr02:5253110..5253475
RNA-Seq ExpressionLsi02G005890
SyntenyLsi02G005890
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008446362.1 PREDICTED: glycine-rich cell wall structural protein [Cucumis melo]3.9e-3394.21Show/hide
Query:  MGSLALKFLWLVVLCALIWASEPRKLVITNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGG
        MGSLA K+LWLVVLCALI ASEPR+LVITNGGEIESEKT+ FQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGG
Subjt:  MGSLALKFLWLVVLCALIWASEPRKLVITNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGG

Query:  GGILGGGAGGGAGGGFGGGLP
        GGILGGGAGGG GGGFGGGLP
Subjt:  GGILGGGAGGGAGGGFGGGLP

XP_011648421.1 glycine-rich cell wall structural protein [Cucumis sativus]9.3e-3595.87Show/hide
Query:  MGSLALKFLWLVVLCALIWASEPRKLVITNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGG
        MGS A K+LWLVVLCALIWASEPRKLVITNGGEIESEKT+ FQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGG
Subjt:  MGSLALKFLWLVVLCALIWASEPRKLVITNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGG

Query:  GGILGGGAGGGAGGGFGGGLP
        GGILGGGAGGGAGGGFGGGLP
Subjt:  GGILGGGAGGGAGGGFGGGLP

XP_022140151.1 glycine-rich protein 5-like [Momordica charantia]7.4e-2483.74Show/hide
Query:  SLALKFLWLVVLCALIWASEPRKLVITNGGEI----ESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGG
        +LA K LWLV+L ALI ASEPRK ++ NGG+I    E+EKT+ FQFFPG+GGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGG
Subjt:  SLALKFLWLVVLCALIWASEPRKLVITNGGEI----ESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGG

Query:  GGGGILGGGAGGGAGGGFGGGLP
        GGGGILGGGAGGG+GGGFGGGLP
Subjt:  GGGGILGGGAGGGAGGGFGGGLP

XP_022994117.1 glycine-rich protein 5 [Cucurbita maxima]2.4e-2285.48Show/hide
Query:  MGS-LALKFLWLVVLCALIWASEPRKLVITNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGG
        MGS LALKFLWL+VL ALI ASEPR+LV T GG   SEKT  FQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGG GFGSGIGGLG GGGGGFGGGG
Subjt:  MGS-LALKFLWLVVLCALIWASEPRKLVITNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGG

Query:  --GGGILGGGAGGGAGGGFGGGLP
          G G+LGGGAGGGAGGGFGGGLP
Subjt:  --GGGILGGGAGGGAGGGFGGGLP

XP_038895952.1 glycine-rich cell wall structural protein-like [Benincasa hispida]4.6e-3495.12Show/hide
Query:  MGSLALKFLWLVVLCALIWASEPRKLVITNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGF--GGG
        MGSLA KFLWLVVLCALIWASEPRKLVITNGGEIESEKT+AFQFFPG+GGGLGGGGG+GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGF  GGG
Subjt:  MGSLALKFLWLVVLCALIWASEPRKLVITNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGF--GGG

Query:  GGGGILGGGAGGGAGGGFGGGLP
        GGGGILGGGAGGGAGGGFGGGLP
Subjt:  GGGGILGGGAGGGAGGGFGGGLP

TrEMBL top hitse value%identityAlignment
A0A0A0LS00 Uncharacterized protein4.5e-3595.87Show/hide
Query:  MGSLALKFLWLVVLCALIWASEPRKLVITNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGG
        MGS A K+LWLVVLCALIWASEPRKLVITNGGEIESEKT+ FQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGG
Subjt:  MGSLALKFLWLVVLCALIWASEPRKLVITNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGG

Query:  GGILGGGAGGGAGGGFGGGLP
        GGILGGGAGGGAGGGFGGGLP
Subjt:  GGILGGGAGGGAGGGFGGGLP

A0A1S3BEW4 glycine-rich cell wall structural protein1.9e-3394.21Show/hide
Query:  MGSLALKFLWLVVLCALIWASEPRKLVITNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGG
        MGSLA K+LWLVVLCALI ASEPR+LVITNGGEIESEKT+ FQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGG
Subjt:  MGSLALKFLWLVVLCALIWASEPRKLVITNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGG

Query:  GGILGGGAGGGAGGGFGGGLP
        GGILGGGAGGG GGGFGGGLP
Subjt:  GGILGGGAGGGAGGGFGGGLP

A0A5D3BMG3 Glycine-rich cell wall structural protein1.9e-3394.21Show/hide
Query:  MGSLALKFLWLVVLCALIWASEPRKLVITNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGG
        MGSLA K+LWLVVLCALI ASEPR+LVITNGGEIESEKT+ FQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGG
Subjt:  MGSLALKFLWLVVLCALIWASEPRKLVITNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGG

Query:  GGILGGGAGGGAGGGFGGGLP
        GGILGGGAGGG GGGFGGGLP
Subjt:  GGILGGGAGGGAGGGFGGGLP

A0A6J1CF04 glycine-rich protein 5-like3.6e-2483.74Show/hide
Query:  SLALKFLWLVVLCALIWASEPRKLVITNGGEI----ESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGG
        +LA K LWLV+L ALI ASEPRK ++ NGG+I    E+EKT+ FQFFPG+GGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGG
Subjt:  SLALKFLWLVVLCALIWASEPRKLVITNGGEI----ESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGG

Query:  GGGGILGGGAGGGAGGGFGGGLP
        GGGGILGGGAGGG+GGGFGGGLP
Subjt:  GGGGILGGGAGGGAGGGFGGGLP

E5GC63 Uncharacterized protein1.9e-3394.21Show/hide
Query:  MGSLALKFLWLVVLCALIWASEPRKLVITNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGG
        MGSLA K+LWLVVLCALI ASEPR+LVITNGGEIESEKT+ FQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGG
Subjt:  MGSLALKFLWLVVLCALIWASEPRKLVITNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGG

Query:  GGILGGGAGGGAGGGFGGGLP
        GGILGGGAGGG GGGFGGGLP
Subjt:  GGILGGGAGGGAGGGFGGGLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCTTTGGCTTTGAAATTTCTCTGGCTGGTGGTTCTGTGTGCACTTATTTGGGCCTCAGAGCCCAGAAAACTTGTAATTACCAATGGGGGAGAGATTGAGAGTGA
AAAGACAGTGGCCTTTCAGTTCTTTCCTGGATACGGCGGTGGACTCGGCGGTGGCGGAGGGTTTGGTGGTGGTGGCGGTGGTGGGTTAGGTGGTGGTTCGGGCTTTGGCA
GTGGAGGTGGTGGGGGTTTTGGGTCTGGCATTGGGGGACTAGGCAGTGGGGGCGGCGGAGGGTTTGGTGGAGGCGGTGGCGGTGGCATTTTAGGTGGTGGAGCTGGCGGA
GGAGCTGGTGGTGGATTTGGAGGTGGACTGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCTTTGGCTTTGAAATTTCTCTGGCTGGTGGTTCTGTGTGCACTTATTTGGGCCTCAGAGCCCAGAAAACTTGTAATTACCAATGGGGGAGAGATTGAGAGTGA
AAAGACAGTGGCCTTTCAGTTCTTTCCTGGATACGGCGGTGGACTCGGCGGTGGCGGAGGGTTTGGTGGTGGTGGCGGTGGTGGGTTAGGTGGTGGTTCGGGCTTTGGCA
GTGGAGGTGGTGGGGGTTTTGGGTCTGGCATTGGGGGACTAGGCAGTGGGGGCGGCGGAGGGTTTGGTGGAGGCGGTGGCGGTGGCATTTTAGGTGGTGGAGCTGGCGGA
GGAGCTGGTGGTGGATTTGGAGGTGGACTGCCTTGA
Protein sequenceShow/hide protein sequence
MGSLALKFLWLVVLCALIWASEPRKLVITNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGG
GAGGGFGGGLP