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Lsi02G005920 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G005920
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description(1->3)-beta-glucan endohydrolase
Genome locationchr02:5269527..5270887
RNA-Seq ExpressionLsi02G005920
SyntenyLsi02G005920
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0046658 - anchored component of plasma membrane (cellular component)
GO:0042973 - glucan endo-1,3-beta-D-glucosidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ99350.1 glucan endo-1,3-beta-glucosidase 1 [Cucumis melo var. makuwa]7.0e-1194.74Show/hide
Query:  HGSCIFPGSKKVRNNTKETVNSTQIPEASGGAAQRLKL
        HGSCIFPGSKK++NNTKETVNSTQIPEASGGAAQRLKL
Subjt:  HGSCIFPGSKKVRNNTKETVNSTQIPEASGGAAQRLKL
XP_004145115.1 glucan endo-1,3-beta-glucosidase 1 [Cucumis sativus]4.5e-1092.11Show/hide
Query:  HGSCIFPGSKKVRNNTKETVNSTQIPEASGGAAQRLKL
        HGSCIFPGSKK++NNTKETVNSTQIPEASGGAAQ LKL
Subjt:  HGSCIFPGSKKVRNNTKETVNSTQIPEASGGAAQRLKL
XP_008440956.1 PREDICTED: glucan endo-1,3-beta-glucosidase 1 [Cucumis melo]7.0e-1194.74Show/hide
Query:  HGSCIFPGSKKVRNNTKETVNSTQIPEASGGAAQRLKL
        HGSCIFPGSKK++NNTKETVNSTQIPEASGGAAQRLKL
Subjt:  HGSCIFPGSKKVRNNTKETVNSTQIPEASGGAAQRLKL
XP_022139909.1 glucan endo-1,3-beta-glucosidase 1 [Momordica charantia]3.7e-1268.75Show/hide
Query:  HGSCIFPGSKKVRNNTKETVNSTQIPEASGGAAQRLKLMGEMSRIMEKGVIHTFLLAVLSFFLF
        HGSCIFPGSKKV N TKETVNSTQ P+ASG AA RL+L GEMS   ++  +H FLLA   FFLF
Subjt:  HGSCIFPGSKKVRNNTKETVNSTQIPEASGGAAQRLKLMGEMSRIMEKGVIHTFLLAVLSFFLF
XP_038895143.1 glucan endo-1,3-beta-glucosidase 1 [Benincasa hispida]4.2e-1680.6Show/hide
Query:  HGSCIFPGSKKVRNNTKETVNSTQIPEASGGAAQRLKLMGEMSRIMEKGVIHTFLLAVLSFFLFSFL
        HGSCIFPGSKKV+NNTKE VNSTQIP+ASG AAQRLKL   MS I+EKG  HTFLLAV SFFLFS L
Subjt:  HGSCIFPGSKKVRNNTKETVNSTQIPEASGGAAQRLKLMGEMSRIMEKGVIHTFLLAVLSFFLFSFL
TrEMBL top hitse value%identityAlignment
A0A1S3B1W0 (1->3)-beta-glucan endohydrolase3.4e-1194.74Show/hide
Query:  HGSCIFPGSKKVRNNTKETVNSTQIPEASGGAAQRLKL
        HGSCIFPGSKK++NNTKETVNSTQIPEASGGAAQRLKL
Subjt:  HGSCIFPGSKKVRNNTKETVNSTQIPEASGGAAQRLKL
A0A5A7UQD8 (1->3)-beta-glucan endohydrolase3.4e-1194.74Show/hide
Query:  HGSCIFPGSKKVRNNTKETVNSTQIPEASGGAAQRLKL
        HGSCIFPGSKK++NNTKETVNSTQIPEASGGAAQRLKL
Subjt:  HGSCIFPGSKKVRNNTKETVNSTQIPEASGGAAQRLKL
A0A5D3BHS9 (1->3)-beta-glucan endohydrolase3.4e-1194.74Show/hide
Query:  HGSCIFPGSKKVRNNTKETVNSTQIPEASGGAAQRLKL
        HGSCIFPGSKK++NNTKETVNSTQIPEASGGAAQRLKL
Subjt:  HGSCIFPGSKKVRNNTKETVNSTQIPEASGGAAQRLKL
A0A6J1CDL3 (1->3)-beta-glucan endohydrolase1.8e-1268.75Show/hide
Query:  HGSCIFPGSKKVRNNTKETVNSTQIPEASGGAAQRLKLMGEMSRIMEKGVIHTFLLAVLSFFLF
        HGSCIFPGSKKV N TKETVNSTQ P+ASG AA RL+L GEMS   ++  +H FLLA   FFLF
Subjt:  HGSCIFPGSKKVRNNTKETVNSTQIPEASGGAAQRLKLMGEMSRIMEKGVIHTFLLAVLSFFLF
E5GC60 (1->3)-beta-glucan endohydrolase3.4e-1194.74Show/hide
Query:  HGSCIFPGSKKVRNNTKETVNSTQIPEASGGAAQRLKL
        HGSCIFPGSKK++NNTKETVNSTQIPEASGGAAQRLKL
Subjt:  HGSCIFPGSKKVRNNTKETVNSTQIPEASGGAAQRLKL
SwissProt top hitse value%identityAlignment
O65399 Glucan endo-1,3-beta-glucosidase 13.9e-0454.35Show/hide
Query:  HGSCIFPGSKKVRNNTKETVNSTQIPEASGGAAQRLKLMGEMSRIM
        HGSCIFPGSKKV N T+  VNST++  A+G A  R    G    IM
Subjt:  HGSCIFPGSKKVRNNTKETVNSTQIPEASGGAAQRLKLMGEMSRIM
Arabidopsis top hitse value%identityAlignment
AT1G11820.2 O-Glycosyl hydrolases family 17 protein2.7e-0554.35Show/hide
Query:  HGSCIFPGSKKVRNNTKETVNSTQIPEASGGAAQRLKLMGEMSRIM
        HGSCIFPGSKKV N T+  VNST++  A+G A  R    G    IM
Subjt:  HGSCIFPGSKKVRNNTKETVNSTQIPEASGGAAQRLKLMGEMSRIM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCATGGGAGCTGCATATTTCCTGGAAGTAAGAAAGTGAGAAATAATACTAAAGAAACAGTGAACTCAACACAAATCCCTGAAGCCAGTGGAGGGGCAGCTCAGAG
ATTGAAATTGATGGGTGAAATGAGTAGAATAATGGAGAAGGGAGTAATCCATACCTTTTTGCTTGCAGTTTTATCATTCTTTCTGTTCTCATTTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCATGGGAGCTGCATATTTCCTGGAAGTAAGAAAGTGAGAAATAATACTAAAGAAACAGTGAACTCAACACAAATCCCTGAAGCCAGTGGAGGGGCAGCTCAGAG
ATTGAAATTGATGGGTGAAATGAGTAGAATAATGGAGAAGGGAGTAATCCATACCTTTTTGCTTGCAGTTTTATCATTCTTTCTGTTCTCATTTCTTTGATGGGCTCCAT
GGTGAGGAGGCTGATGTAGAAAGAAAAAAAAAAAGAAAAGGGTTTTATATATATTATATATATATATATATTTGAAATGTAATATTTTTATGAAGGTAGAGTTGAAATTC
ATTTTGAGAAATTCTGGGAAAGGCCTCTTTCTTTCCTTTTAGTAGATCCAGGAATTTTGTTTATTCAATTATCAAGATAAAAGTGGGAAGTTCAAATTGTCACAAGATAC
TTTCCTTTCCCTTCCTTACTGTACTTACTAAAGTGCTTTTGTTGAATACGACTTAAAGTTCAAAGATTTAATCAAAGAGTATGAAGGGCTAAGTTTGCACA
Protein sequenceShow/hide protein sequence
MGHGSCIFPGSKKVRNNTKETVNSTQIPEASGGAAQRLKLMGEMSRIMEKGVIHTFLLAVLSFFLFSFL