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Lsi02G005940 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G005940
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAgglutinin domain-containing protein
Genome locationchr02:5285924..5286133
RNA-Seq ExpressionLsi02G005940
SyntenyLsi02G005940
Gene Ontology termsGO:0005576 - extracellular region (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458669.1 PREDICTED: uncharacterized protein LOC103497997 [Cucumis melo]7.0e-1975.44Show/hide
Query:  RTAVKVGVIATKGYCEVPFSYTQRDVLVDGQTRITQHDDGLYTGVNCYNFYYQAKDV
        RT+VKV  + TKGYC+VPFSYTQRD+LVDGQTR T+HDDGL+TG NCYNF+YQ++DV
Subjt:  RTAVKVGVIATKGYCEVPFSYTQRDVLVDGQTRITQHDDGLYTGVNCYNFYYQAKDV

XP_008458670.1 PREDICTED: uncharacterized protein LOC103497999 [Cucumis melo]1.1e-1155.36Show/hide
Query:  RTAVKVGVIATKGYCEVPFSYTQRDVLVDGQTRITQHDDGLYTGVNCYNFYYQAKD
        +T VKV +IA+KG C++PFSY QRDV  DG  +I +HDDG+YTG+NCY++ Y+ ++
Subjt:  RTAVKVGVIATKGYCEVPFSYTQRDVLVDGQTRITQHDDGLYTGVNCYNFYYQAKD

XP_022150379.1 uncharacterized protein LOC111018555 [Momordica charantia]3.7e-1256.9Show/hide
Query:  TAVKVGVIATKGYCEVPFSYTQRDVLVDGQTRITQHDDGLYTGVNCYNFYYQAKDVPL
        + V V ++ATKG C+VP+SYTQ D L++G+T+I + DDG+YTG+NCYNF Y+ K  PL
Subjt:  TAVKVGVIATKGYCEVPFSYTQRDVLVDGQTRITQHDDGLYTGVNCYNFYYQAKDVPL

XP_022156054.1 uncharacterized protein LOC111023023 [Momordica charantia]6.7e-1463.79Show/hide
Query:  TAVKVGVIATKGYCEVPFSYTQRDVLVDGQTRITQHDDGLYTGVNCYNFYYQAKDVPL
        T + V ++AT+GYC+VPFSY QRDVL++G+T I  ++DGLYTG NCYNF Y+AKD PL
Subjt:  TAVKVGVIATKGYCEVPFSYTQRDVLVDGQTRITQHDDGLYTGVNCYNFYYQAKDVPL

XP_022967680.1 uncharacterized protein LOC111467133 [Cucurbita maxima]1.4e-1157.14Show/hide
Query:  VKVGVIATKGYCEVPFSYTQRDVLVDGQTRITQHDDGLYTGVNCYNFYYQAKDVPL
        V+V ++ATKG+C+VP+SYTQRD L++G      +DDG+YT VNCYNF Y+ K  PL
Subjt:  VKVGVIATKGYCEVPFSYTQRDVLVDGQTRITQHDDGLYTGVNCYNFYYQAKDVPL

TrEMBL top hitse value%identityAlignment
A0A1S3C8I1 uncharacterized protein LOC1034979973.4e-1975.44Show/hide
Query:  RTAVKVGVIATKGYCEVPFSYTQRDVLVDGQTRITQHDDGLYTGVNCYNFYYQAKDV
        RT+VKV  + TKGYC+VPFSYTQRD+LVDGQTR T+HDDGL+TG NCYNF+YQ++DV
Subjt:  RTAVKVGVIATKGYCEVPFSYTQRDVLVDGQTRITQHDDGLYTGVNCYNFYYQAKDV

A0A5D3DM96 Agglutinin domain-containing protein5.2e-1255.36Show/hide
Query:  RTAVKVGVIATKGYCEVPFSYTQRDVLVDGQTRITQHDDGLYTGVNCYNFYYQAKD
        +T VKV +IA+KG C++PFSY QRDV  DG  +I +HDDG+YTG+NCY++ Y+ ++
Subjt:  RTAVKVGVIATKGYCEVPFSYTQRDVLVDGQTRITQHDDGLYTGVNCYNFYYQAKD

A0A5D3DML5 Agglutinin domain-containing protein3.4e-1975.44Show/hide
Query:  RTAVKVGVIATKGYCEVPFSYTQRDVLVDGQTRITQHDDGLYTGVNCYNFYYQAKDV
        RT+VKV  + TKGYC+VPFSYTQRD+LVDGQTR T+HDDGL+TG NCYNF+YQ++DV
Subjt:  RTAVKVGVIATKGYCEVPFSYTQRDVLVDGQTRITQHDDGLYTGVNCYNFYYQAKDV

A0A6J1D9W8 uncharacterized protein LOC1110185551.8e-1256.9Show/hide
Query:  TAVKVGVIATKGYCEVPFSYTQRDVLVDGQTRITQHDDGLYTGVNCYNFYYQAKDVPL
        + V V ++ATKG C+VP+SYTQ D L++G+T+I + DDG+YTG+NCYNF Y+ K  PL
Subjt:  TAVKVGVIATKGYCEVPFSYTQRDVLVDGQTRITQHDDGLYTGVNCYNFYYQAKDVPL

A0A6J1DS59 uncharacterized protein LOC1110230233.3e-1463.79Show/hide
Query:  TAVKVGVIATKGYCEVPFSYTQRDVLVDGQTRITQHDDGLYTGVNCYNFYYQAKDVPL
        T + V ++AT+GYC+VPFSY QRDVL++G+T I  ++DGLYTG NCYNF Y+AKD PL
Subjt:  TAVKVGVIATKGYCEVPFSYTQRDVLVDGQTRITQHDDGLYTGVNCYNFYYQAKDVPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGAACTGCTGTAAAAGTGGGTGTCATAGCAACAAAAGGATATTGTGAGGTTCCATTTTCATATACTCAACGTGATGTTCTTGTGGATGGACAGACTAGAATTAC
ACAGCATGATGATGGTTTATACACTGGTGTTAATTGCTATAACTTTTACTATCAAGCTAAAGATGTACCTTTACAGACTACATCAACTACCATTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAGAACTGCTGTAAAAGTGGGTGTCATAGCAACAAAAGGATATTGTGAGGTTCCATTTTCATATACTCAACGTGATGTTCTTGTGGATGGACAGACTAGAATTAC
ACAGCATGATGATGGTTTATACACTGGTGTTAATTGCTATAACTTTTACTATCAAGCTAAAGATGTACCTTTACAGACTACATCAACTACCATTTCTTAA
Protein sequenceShow/hide protein sequence
MQRTAVKVGVIATKGYCEVPFSYTQRDVLVDGQTRITQHDDGLYTGVNCYNFYYQAKDVPLQTTSTTIS