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Lsi02G006040 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G006040
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDUF4228 domain-containing protein
Genome locationchr02:5372815..5373171
RNA-Seq ExpressionLsi02G006040
SyntenyLsi02G006040
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056859.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa]2.6e-5087.39Show/hide
Query:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGRGCGGNATTSGGDPEKYRLLG-EKEAASCAPPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRLVNGEDEF
        MGNCCRSQSSTMVFAGDDWGSFSSKH  GRGCGGNATTSGGDPEK+RLLG +KEAASC+ P VKIKMTKRELEVLVKKLEMQGL+LEQVIGR++ GE+E+
Subjt:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGRGCGGNATTSGGDPEKYRLLG-EKEAASCAPPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRLVNGEDEF

Query:  EVEHHRSWRPSLQSIPEDY
        E+EHHRSWRPSLQSIPEDY
Subjt:  EVEHHRSWRPSLQSIPEDY
KAG6584086.1 hypothetical protein SDJN03_20018, partial [Cucurbita argyrosperma subsp. sororia]1.8e-4683.62Show/hide
Query:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGRGCGGNATTSGGDPEKYRLLGEKEAASCAPPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRLVNGEDEFE
        MGNCCRSQSSTM+FAGDDWGSFSSKHGRGR  GGNA+TS GDPEKYRLLGEK+ +SC  PQVKIKMTKRELE LVK LE++GLSLEQVIGR+ N EDEF+
Subjt:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGRGCGGNATTSGGDPEKYRLLGEKEAASCAPPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRLVNGEDEFE

Query:  VEHHRSWRPSLQSIPE
         EHHRSWRPSLQSIPE
Subjt:  VEHHRSWRPSLQSIPE
XP_022933211.1 uncharacterized protein LOC111440057 [Cucurbita moschata]1.3e-4683.62Show/hide
Query:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGRGCGGNATTSGGDPEKYRLLGEKEAASCAPPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRLVNGEDEFE
        MGNCCRSQSSTM+FAGDDWGSFSSKHGRGR  GGNA+TS GDPEKYRLLGEK+ +SC  PQVKIKMTKRELE LVK LE++GLSLEQVIGR++N EDEF+
Subjt:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGRGCGGNATTSGGDPEKYRLLGEKEAASCAPPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRLVNGEDEFE

Query:  VEHHRSWRPSLQSIPE
         EHHRSWRPSLQSIPE
Subjt:  VEHHRSWRPSLQSIPE
XP_023001321.1 uncharacterized protein LOC111495485 [Cucurbita maxima]6.7e-4683.62Show/hide
Query:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGRGCGGNATTSGGDPEKYRLLGEKEAASCAPPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRLVNGEDEFE
        MGNCCRSQSSTMVFAGDDWGSFSSKHGRGR  GGNA+ S GDPEKYRLLGEK+ +SC  PQVKIKMTKRELE LVK LE++GLSLEQVIGR++N EDEF+
Subjt:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGRGCGGNATTSGGDPEKYRLLGEKEAASCAPPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRLVNGEDEFE

Query:  VEHHRSWRPSLQSIPE
         EHHRSWRPSLQSIPE
Subjt:  VEHHRSWRPSLQSIPE
XP_038895954.1 uncharacterized protein LOC120084128 [Benincasa hispida]8.2e-5291.6Show/hide
Query:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGRGCGGNATTSGGDPEKYRLLGEKEAASCAPPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRLV-NGEDEF
        MGNCCRSQSSTMVF GDDWGSFSSKHGRGR  GGNATTSGGDPEKYRLLGEKEAASC+ PQVKIKM+KRELE LVKKLEMQG+SLEQVIGR+V NGEDEF
Subjt:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGRGCGGNATTSGGDPEKYRLLGEKEAASCAPPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRLV-NGEDEF

Query:  EVEHHRSWRPSLQSIPEDY
        EVEHHRSWRPSLQSIPEDY
Subjt:  EVEHHRSWRPSLQSIPEDY
TrEMBL top hitse value%identityAlignment
A0A0A0LRL1 Uncharacterized protein6.3e-5086.44Show/hide
Query:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGRGCGGNATTSGGDPEKYRLLGEKEAASCAPPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRLVNGEDEFE
        MGNCCRSQSSTMVFAGDDWGSFSSKHGRG G   +A TSGGDPEK+RLLGEKEA SC+ P VKIKMTKRELEVLVKKLEMQGLSLEQVIGR++ GE+EFE
Subjt:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGRGCGGNATTSGGDPEKYRLLGEKEAASCAPPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRLVNGEDEFE

Query:  VEHHRSWRPSLQSIPEDY
        +EHHRSWRPSLQSIPEDY
Subjt:  VEHHRSWRPSLQSIPEDY
A0A1S3BEX3 uncharacterized protein LOC1034891321.5e-4386.11Show/hide
Query:  MVFAGDDWGSFSSKHGRGRGCGGNATTSGGDPEKYRLLG-EKEAASCAPPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRLVNGEDEFEVEHHRSWRPS
        MVFAGDDWGSFSSKH  GRGCGGNATTSGGDPEK+RLLG +KEAASC+ P VKIKMTKRELEVLVKKLEMQGL+LEQVIGR++ GE+E+E+EHHRSWRPS
Subjt:  MVFAGDDWGSFSSKHGRGRGCGGNATTSGGDPEKYRLLG-EKEAASCAPPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRLVNGEDEFEVEHHRSWRPS

Query:  LQSIPEDY
        LQSIPEDY
Subjt:  LQSIPEDY
A0A5A7UTK3 DUF4228 domain-containing protein1.3e-5087.39Show/hide
Query:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGRGCGGNATTSGGDPEKYRLLG-EKEAASCAPPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRLVNGEDEF
        MGNCCRSQSSTMVFAGDDWGSFSSKH  GRGCGGNATTSGGDPEK+RLLG +KEAASC+ P VKIKMTKRELEVLVKKLEMQGL+LEQVIGR++ GE+E+
Subjt:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGRGCGGNATTSGGDPEKYRLLG-EKEAASCAPPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRLVNGEDEF

Query:  EVEHHRSWRPSLQSIPEDY
        E+EHHRSWRPSLQSIPEDY
Subjt:  EVEHHRSWRPSLQSIPEDY
A0A6J1EYG4 uncharacterized protein LOC1114400576.5e-4783.62Show/hide
Query:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGRGCGGNATTSGGDPEKYRLLGEKEAASCAPPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRLVNGEDEFE
        MGNCCRSQSSTM+FAGDDWGSFSSKHGRGR  GGNA+TS GDPEKYRLLGEK+ +SC  PQVKIKMTKRELE LVK LE++GLSLEQVIGR++N EDEF+
Subjt:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGRGCGGNATTSGGDPEKYRLLGEKEAASCAPPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRLVNGEDEFE

Query:  VEHHRSWRPSLQSIPE
         EHHRSWRPSLQSIPE
Subjt:  VEHHRSWRPSLQSIPE
A0A6J1KIA5 uncharacterized protein LOC1114954853.2e-4683.62Show/hide
Query:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGRGCGGNATTSGGDPEKYRLLGEKEAASCAPPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRLVNGEDEFE
        MGNCCRSQSSTMVFAGDDWGSFSSKHGRGR  GGNA+ S GDPEKYRLLGEK+ +SC  PQVKIKMTKRELE LVK LE++GLSLEQVIGR++N EDEF+
Subjt:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGRGCGGNATTSGGDPEKYRLLGEKEAASCAPPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRLVNGEDEFE

Query:  VEHHRSWRPSLQSIPE
         EHHRSWRPSLQSIPE
Subjt:  VEHHRSWRPSLQSIPE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21920.1 unknown protein1.7e-1032.06Show/hide
Query:  MGNC-CRSQSSTMVFAGDDWGSFSSKHGRGRGCGGNATTSGGDPEKYRLLGE-------KEAASCAPPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRL
        MGNC C ++ +T  ++GDD GS++ +  R R    +     G+    +LLGE         ++S    ++KI++TK+ELE L++ + ++ L+ E+++ +L
Subjt:  MGNC-CRSQSSTMVFAGDDWGSFSSKHGRGRGCGGNATTSGGDPEKYRLLGE-------KEAASCAPPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRL

Query:  V-NGEDEF------EVEHHRSWRPSLQSIPE
        +  G D+          HH+ W+P LQSIPE
Subjt:  V-NGEDEF------EVEHHRSWRPSLQSIPE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAACTGTTGCAGAAGCCAATCCTCTACAATGGTCTTCGCCGGTGACGATTGGGGCTCCTTCAGTTCCAAGCACGGCCGTGGCCGTGGCTGCGGCGGAAACGCCAC
AACCTCCGGCGGCGATCCAGAGAAATATAGACTACTTGGAGAGAAGGAAGCAGCGTCGTGTGCGCCGCCGCAAGTGAAAATCAAGATGACGAAGAGAGAGCTTGAGGTTC
TGGTGAAGAAGCTGGAGATGCAAGGATTGAGTCTAGAACAAGTTATTGGTCGGTTGGTGAACGGTGAAGATGAATTTGAAGTTGAGCATCATCGATCATGGAGGCCTTCC
CTTCAAAGCATTCCAGAGGATTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAACTGTTGCAGAAGCCAATCCTCTACAATGGTCTTCGCCGGTGACGATTGGGGCTCCTTCAGTTCCAAGCACGGCCGTGGCCGTGGCTGCGGCGGAAACGCCAC
AACCTCCGGCGGCGATCCAGAGAAATATAGACTACTTGGAGAGAAGGAAGCAGCGTCGTGTGCGCCGCCGCAAGTGAAAATCAAGATGACGAAGAGAGAGCTTGAGGTTC
TGGTGAAGAAGCTGGAGATGCAAGGATTGAGTCTAGAACAAGTTATTGGTCGGTTGGTGAACGGTGAAGATGAATTTGAAGTTGAGCATCATCGATCATGGAGGCCTTCC
CTTCAAAGCATTCCAGAGGATTACTGA
Protein sequenceShow/hide protein sequence
MGNCCRSQSSTMVFAGDDWGSFSSKHGRGRGCGGNATTSGGDPEKYRLLGEKEAASCAPPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRLVNGEDEFEVEHHRSWRPS
LQSIPEDY