; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G006090 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G006090
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description15.4 kDa class V heat shock protein
Genome locationchr02:5408650..5409504
RNA-Seq ExpressionLsi02G006090
SyntenyLsi02G006090
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0009408 - response to heat (biological process)
GO:0009651 - response to salt stress (biological process)
GO:0042542 - response to hydrogen peroxide (biological process)
GO:0051259 - protein complex oligomerization (biological process)
GO:0043621 - protein self-association (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone
IPR031107 - Small heat shock protein HSP20


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADU55781.1 HSP15 [Citrullus lanatus]8.9e-6394.78Show/hide
Query:  MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISA
        MEISTSNPSSLH SFP RLLFPYFHYTIP NYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVT+PAKSFSRKFRLPV+VDVDAISA
Subjt:  MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISA

Query:  GFENGVLEITVPRSFRRSSVIHSPDQLQLLARAA
        GFENGVLEITVPRSFRRSSVIHSPD  QLLARAA
Subjt:  GFENGVLEITVPRSFRRSSVIHSPDQLQLLARAA

XP_022140087.1 15.4 kDa class V heat shock protein [Momordica charantia]1.9e-5283.21Show/hide
Query:  MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISA
        MEI  SN  SL N FP  LL+PY+HY IP+NYVHWVQT DSH+FSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGV   AKSFSRKFRLPV+VDVDAISA
Subjt:  MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISA

Query:  GFENGVLEITVPRSFRRSSVI---HSPDQLQLLARAA
        GFENGVLEITVPRSFRR+SVI    SPDQLQLLARAA
Subjt:  GFENGVLEITVPRSFRRSSVI---HSPDQLQLLARAA

XP_022933175.1 15.4 kDa class V heat shock protein [Cucurbita moschata]1.2e-5683.94Show/hide
Query:  MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISA
        MEISTS+P+SLHNS   RLLFPY+HY +P+NYVHW QTS+SH+FSADLPGVRKEEIKVEVEDSRYLIIRT+AVDGVT+PAKSFSRKFRLPV+VDVDAISA
Subjt:  MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISA

Query:  GFENGVLEITVPRSFRRSSVIH---SPDQLQLLARAA
        GFENGVLEITVPRS R  SVIH   S DQLQLLARAA
Subjt:  GFENGVLEITVPRSFRRSSVIH---SPDQLQLLARAA

XP_023001317.1 15.4 kDa class V heat shock protein [Cucurbita maxima]5.6e-5785.4Show/hide
Query:  MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISA
        MEISTS+ +SLHNS P RLLFPY+HY +P+NYVHW QTS+SH+FSADLPGVRKEEIKVEVEDSRYLIIRT+AVDGVT+PAKSFSRKFRLPV+VDVDAISA
Subjt:  MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISA

Query:  GFENGVLEITVPRSFRRSSVIH---SPDQLQLLARAA
        GFENGVLEITVPRSFR  SVIH   SPDQLQLLARAA
Subjt:  GFENGVLEITVPRSFRRSSVIH---SPDQLQLLARAA

XP_038894889.1 15.4 kDa class V heat shock protein [Benincasa hispida]1.1e-6595.52Show/hide
Query:  MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISA
        MEISTSNPSSLHNSFP RLLFPYFHYTIP NYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVT+PAKSFSRKFRLPV++DVD ISA
Subjt:  MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISA

Query:  GFENGVLEITVPRSFRRSSVIHSPDQLQLLARAA
        GFENGVLEITVPRSFRRSSVIHSPDQLQLLARAA
Subjt:  GFENGVLEITVPRSFRRSSVIHSPDQLQLLARAA

TrEMBL top hitse value%identityAlignment
A0A0A0LUT8 SHSP domain-containing protein1.2e-5283.7Show/hide
Query:  MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISA
        MEISTS P          LLFPY+HY+IP NYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAV+GVT PAKSFSRKFRLPV+VDVD ISA
Subjt:  MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISA

Query:  GFENGVLEITVPR-SFRRSSVIHSPDQLQLLARAA
        GFENGVLEITVPR SFRR SV+HSPDQ QLLARAA
Subjt:  GFENGVLEITVPR-SFRRSSVIHSPDQLQLLARAA

A0A6J1CFU3 15.4 kDa class V heat shock protein9.0e-5383.21Show/hide
Query:  MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISA
        MEI  SN  SL N FP  LL+PY+HY IP+NYVHWVQT DSH+FSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGV   AKSFSRKFRLPV+VDVDAISA
Subjt:  MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISA

Query:  GFENGVLEITVPRSFRRSSVI---HSPDQLQLLARAA
        GFENGVLEITVPRSFRR+SVI    SPDQLQLLARAA
Subjt:  GFENGVLEITVPRSFRRSSVI---HSPDQLQLLARAA

A0A6J1F477 15.4 kDa class V heat shock protein6.1e-5783.94Show/hide
Query:  MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISA
        MEISTS+P+SLHNS   RLLFPY+HY +P+NYVHW QTS+SH+FSADLPGVRKEEIKVEVEDSRYLIIRT+AVDGVT+PAKSFSRKFRLPV+VDVDAISA
Subjt:  MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISA

Query:  GFENGVLEITVPRSFRRSSVIH---SPDQLQLLARAA
        GFENGVLEITVPRS R  SVIH   S DQLQLLARAA
Subjt:  GFENGVLEITVPRSFRRSSVIH---SPDQLQLLARAA

A0A6J1KG72 15.4 kDa class V heat shock protein2.7e-5785.4Show/hide
Query:  MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISA
        MEISTS+ +SLHNS P RLLFPY+HY +P+NYVHW QTS+SH+FSADLPGVRKEEIKVEVEDSRYLIIRT+AVDGVT+PAKSFSRKFRLPV+VDVDAISA
Subjt:  MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISA

Query:  GFENGVLEITVPRSFRRSSVIH---SPDQLQLLARAA
        GFENGVLEITVPRSFR  SVIH   SPDQLQLLARAA
Subjt:  GFENGVLEITVPRSFRRSSVIH---SPDQLQLLARAA

H6TB34 HSP154.3e-6394.78Show/hide
Query:  MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISA
        MEISTSNPSSLH SFP RLLFPYFHYTIP NYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVT+PAKSFSRKFRLPV+VDVDAISA
Subjt:  MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISA

Query:  GFENGVLEITVPRSFRRSSVIHSPDQLQLLARAA
        GFENGVLEITVPRSFRRSSVIHSPD  QLLARAA
Subjt:  GFENGVLEITVPRSFRRSSVIHSPDQLQLLARAA

SwissProt top hitse value%identityAlignment
O49710 15.4 kDa class V heat shock protein7.7e-2556.88Show/hide
Query:  NYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEA--VDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPRSFRRSSVIHS---PD
        N+V W Q+ DSH FS DLPG+RKEEIKVE+EDS YLIIRTEA  +     P K+F RKFRLP  +D+  ISAG+E+GVL + VP+      +I     P+
Subjt:  NYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEA--VDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPRSFRRSSVIHS---PD

Query:  QLQLLARAA
         LQLLARAA
Subjt:  QLQLLARAA

P27777 16.9 kDa class I heat shock protein 11.2e-1443.48Show/hide
Query:  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPRS
        + W +T +SH+F ADLPGV+KEE+KVEVE+   L+I          + +    V   +  F R+FRLP    VD + AG ENGVL +TVP++
Subjt:  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPRS

Q05832 18.3 kDa class I heat shock protein1.6e-1444.57Show/hide
Query:  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPRS
        + W +T ++H+F ADLPGV+KEE+KVEVED   L I          + +    V   +  F RKFRLP    VD + AG ENGVL +TVP++
Subjt:  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPRS

Q7EZ57 18.8 kDa class V heat shock protein5.2e-2155.32Show/hide
Query:  NYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTIPA------KSFSRKFRLPVMVDVDAISAGFENGVLEITVPRSFRRS
        ++V W +T+ +HL+SA LPGVRKEEI+VEVED+ YL+IRTE  DG           +SF+RKFRLP MVD D ISA + +GVL +TVPR   R+
Subjt:  NYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTIPA------KSFSRKFRLPVMVDVDAISAGFENGVLEITVPRSFRRS

Q943E6 16.9 kDa class I heat shock protein 21.2e-1443.48Show/hide
Query:  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPRS
        + W +T +SH+F ADLPGV+KEE+KVEVE+   L+I          + +    V   +  F R+FRLP    VD + AG ENGVL +TVP++
Subjt:  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPRS

Arabidopsis top hitse value%identityAlignment
AT1G07400.1 HSP20-like chaperones superfamily protein7.4e-1542.86Show/hide
Query:  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPR
        V W +T+++H+F ADLPG++KEE+KVE+ED   L I          + +    V   +  FSRKF+LP  V +D + A  ENGVL +TVP+
Subjt:  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPR

AT1G53540.1 HSP20-like chaperones superfamily protein1.3e-1440.78Show/hide
Query:  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVD----------GVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPRSFRRSSVIH
        V W +T ++H+F ADLPG+RKEE+KVEVED   L I  E  +           V   +  F+R+FRLP    ++ I A  ENGVL +TVP+   +   + 
Subjt:  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVD----------GVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPRSFRRSSVIH

Query:  SPD
        S D
Subjt:  SPD

AT1G59860.1 HSP20-like chaperones superfamily protein3.3e-1543.96Show/hide
Query:  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPR
        V W +T+++H+F ADLPG++KEE+KVE+ED   L I          + +    V   +  FSRKFRLP  V +D + A  ENGVL +TVP+
Subjt:  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPR

AT2G29500.1 HSP20-like chaperones superfamily protein2.8e-1437.62Show/hide
Query:  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPRSFRRSSVIH
        V W +T ++H+F ADLPG++KEE+KVE+E+   L I          + +    V   +  F+R+FRLP  V +D + A  ENGVL +TVP++  + + + 
Subjt:  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPRSFRRSSVIH

Query:  S
        S
Subjt:  S

AT4G21870.1 HSP20-like chaperones superfamily protein5.5e-2656.88Show/hide
Query:  NYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEA--VDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPRSFRRSSVIHS---PD
        N+V W Q+ DSH FS DLPG+RKEEIKVE+EDS YLIIRTEA  +     P K+F RKFRLP  +D+  ISAG+E+GVL + VP+      +I     P+
Subjt:  NYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEA--VDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPRSFRRSSVIHS---PD

Query:  QLQLLARAA
         LQLLARAA
Subjt:  QLQLLARAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTTCAACTTCTAATCCTTCTTCCCTTCACAACTCATTTCCTTCTCGTCTCCTCTTTCCCTACTTCCATTACACCATTCCTCGCAATTACGTTCACTGGGTACA
AACCTCCGATTCTCATCTTTTCTCCGCCGATCTCCCCGGTGTTCGTAAGGAGGAGATAAAAGTGGAAGTTGAAGATTCGCGGTACCTGATCATTCGAACGGAGGCCGTGG
ATGGAGTTACGATTCCGGCGAAGAGCTTCTCCAGGAAGTTTCGCCTTCCGGTAATGGTTGATGTAGATGCGATTTCGGCTGGATTTGAGAATGGAGTTTTGGAGATTACG
GTACCTAGGTCTTTCAGAAGAAGCTCTGTTATTCATTCTCCTGATCAACTTCAACTTCTTGCTAGGGCTGCTTGA
mRNA sequenceShow/hide mRNA sequence
GGCTGCTGCAACTTGCTAAAAAGATCCAATGTTCTATTTAAAGGTTGGAAGAGCATCTCAAAAACCCTATCCATTCAGTCTCACCGGCCCCGCCAACGAAAAAACCGCGA
AACAAAAATCTTCCTTCAAACCTTTCAACAATGGAGATTTCAACTTCTAATCCTTCTTCCCTTCACAACTCATTTCCTTCTCGTCTCCTCTTTCCCTACTTCCATTACAC
CATTCCTCGCAATTACGTTCACTGGGTACAAACCTCCGATTCTCATCTTTTCTCCGCCGATCTCCCCGGTGTTCGTAAGGAGGAGATAAAAGTGGAAGTTGAAGATTCGC
GGTACCTGATCATTCGAACGGAGGCCGTGGATGGAGTTACGATTCCGGCGAAGAGCTTCTCCAGGAAGTTTCGCCTTCCGGTAATGGTTGATGTAGATGCGATTTCGGCT
GGATTTGAGAATGGAGTTTTGGAGATTACGGTACCTAGGTCTTTCAGAAGAAGCTCTGTTATTCATTCTCCTGATCAACTTCAACTTCTTGCTAGGGCTGCTTGATTTGA
TTGATCATTTCTGATTCAAGTTTGTTGGCTCTGCCTTCTTTTTTCCCCTTTTGTTGGAAATTTGAATGGATTGTTGCTGCAAATGGCGAAATTTCAAGCTCTGTACTATT
AATTTGTCATGAATAGGAAGAATTTATGTATCCATATCAACAAATTGTTGGCTTTAGAACTGTAGAATTGATTTTAATGAATCAGATTTATCTGAA
Protein sequenceShow/hide protein sequence
MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEIT
VPRSFRRSSVIHSPDQLQLLARAA