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Lsi02G006280 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G006280
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionXyloglucan endotransglucosylase/hydrolase
Genome locationchr02:5586570..5588747
RNA-Seq ExpressionLsi02G006280
SyntenyLsi02G006280
Gene Ontology termsGO:0010411 - xyloglucan metabolic process (biological process)
GO:0042546 - cell wall biogenesis (biological process)
GO:0071555 - cell wall organization (biological process)
GO:0048046 - apoplast (cellular component)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
GO:0016762 - xyloglucan:xyloglucosyl transferase activity (molecular function)
InterPro domainsIPR000757 - Glycoside hydrolase family 16
IPR008263 - Glycoside hydrolase, family 16, active site
IPR013320 - Concanavalin A-like lectin/glucanase domain superfamily
IPR044791 - Beta-glucanase/XTH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584070.1 putative xyloglucan endotransglucosylase/hydrolase protein 8, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3398.53Show/hide
Query:  MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
        MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWN HRIV
Subjt:  MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
KAG7019671.1 putative xyloglucan endotransglucosylase/hydrolase protein 8 [Cucurbita argyrosperma subsp. argyrosperma]2.0e-3497.14Show/hide
Query:  MQMCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
        +QMCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWN HRIV
Subjt:  MQMCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
XP_004153451.1 probable xyloglucan endotransglucosylase/hydrolase protein 8 [Cucumis sativus]3.5e-34100Show/hide
Query:  MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
        MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
Subjt:  MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
XP_008441409.1 PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 8 [Cucumis melo]3.5e-34100Show/hide
Query:  MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
        MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
Subjt:  MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
XP_038893972.1 probable xyloglucan endotransglucosylase/hydrolase protein 8 [Benincasa hispida]3.5e-34100Show/hide
Query:  MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
        MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
Subjt:  MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
TrEMBL top hitse value%identityAlignment
A0A1S3B3C4 Xyloglucan endotransglucosylase/hydrolase1.7e-34100Show/hide
Query:  MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
        MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
Subjt:  MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
A0A5D3BI37 Xyloglucan endotransglucosylase/hydrolase1.7e-34100Show/hide
Query:  MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
        MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
Subjt:  MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
A0A6J1EZ26 Xyloglucan endotransglucosylase/hydrolase8.4e-3498.53Show/hide
Query:  MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
        MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWN HRIV
Subjt:  MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
A0A6J1KKT1 Xyloglucan endotransglucosylase/hydrolase8.4e-3498.53Show/hide
Query:  MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
        MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWN HRIV
Subjt:  MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
N0DX82 Xyloglucan endotransglucosylase/hydrolase1.7e-34100Show/hide
Query:  MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
        MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
Subjt:  MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
SwissProt top hitse value%identityAlignment
Q40144 Probable xyloglucan endotransglucosylase/hydrolase 15.1e-2067.8Show/hide
Query:  ERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
        E DE+DFEFLGNR+GQPY++QTNV+  G GNRE R  LWFDPTK +H+YS+LWN + IV
Subjt:  ERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
Q8L9A9 Probable xyloglucan endotransglucosylase/hydrolase protein 81.8e-3386.76Show/hide
Query:  MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
        MC+ENGAGPERDE+DFEFLGNR+GQPY+IQTNVYKNGTGNREMRH LWFDPTKD+HTYSILWN+H++V
Subjt:  MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
Q8LDW9 Xyloglucan endotransglucosylase/hydrolase protein 96.6e-2063.93Show/hide
Query:  GPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
        GP  +E DFEFLGN +G+PY++QTN+Y NG GNRE R  LWFDPT +FHTYSILW+   +V
Subjt:  GPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
Q9XIW1 Probable xyloglucan endotransglucosylase/hydrolase protein 51.7e-2067.8Show/hide
Query:  ERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
        E DE+DFEFLGNR+GQPY++QTNV+  G GNRE R  LWFDP+KD+H+YS+LWN ++IV
Subjt:  ERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
Q9ZVK1 Probable xyloglucan endotransglucosylase/hydrolase protein 103.5e-2173.33Show/hide
Query:  PERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
        P RDE+DFEFLGN +GQPY++QTNVY  G  NRE R  LWFDP KDFHTYSILWN H+IV
Subjt:  PERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
Arabidopsis top hitse value%identityAlignment
AT1G11545.1 xyloglucan endotransglucosylase/hydrolase 81.3e-3486.76Show/hide
Query:  MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
        MC+ENGAGPERDE+DFEFLGNR+GQPY+IQTNVYKNGTGNREMRH LWFDPTKD+HTYSILWN+H++V
Subjt:  MCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
AT2G14620.1 xyloglucan endotransglucosylase/hydrolase 102.5e-2273.33Show/hide
Query:  PERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
        P RDE+DFEFLGN +GQPY++QTNVY  G  NRE R  LWFDP KDFHTYSILWN H+IV
Subjt:  PERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
AT4G03210.1 xyloglucan endotransglucosylase/hydrolase 94.7e-2163.93Show/hide
Query:  GPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
        GP  +E DFEFLGN +G+PY++QTN+Y NG GNRE R  LWFDPT +FHTYSILW+   +V
Subjt:  GPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
AT4G03210.2 xyloglucan endotransglucosylase/hydrolase 94.7e-2163.93Show/hide
Query:  GPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
        GP  +E DFEFLGN +G+PY++QTN+Y NG GNRE R  LWFDPT +FHTYSILW+   +V
Subjt:  GPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
AT5G13870.1 xyloglucan endotransglucosylase/hydrolase 51.2e-2167.8Show/hide
Query:  ERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV
        E DE+DFEFLGNR+GQPY++QTNV+  G GNRE R  LWFDP+KD+H+YS+LWN ++IV
Subjt:  ERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGATGTGCACGGAGAATGGAGCTGGACCGGAGAGAGATGAGCTAGACTTCGAGTTCTTGGGTAATAGAAGTGGACAGCCATATCTGATTCAGACGAATGTTTACAA
GAACGGGACTGGCAACCGTGAGATGAGACACATGCTGTGGTTCGACCCCACAAAAGACTTCCATACCTATTCCATTCTCTGGAATGACCACAGGATTGTGTAA
mRNA sequenceShow/hide mRNA sequence
CCTGGCTGCACCTCCCTGTTCCCTAAGCTTTCCATTAATACCCATGTCGGCTTTGCCTCTGCCTTCTTTTATAATAAGCTTCTTTTGGGCATTTTGGTCAAATAACTATC
TCCTCAGTCCTCAGACCAACCAAAGTTCAATGGATCAAAACTCCTCGTAGTGCCAACTACATTATTAACATTAAATTTGCTTGAAATTGCAAGTGAAATGCCTTGTAACT
TATATGGGCGTACAAAAGCTTTGTTCATTTCTTACAGTTCAATTATCAAATATCAACTCACATCAATAATTTCAATTATTTAGTGCTCATTTCTTCTGGAGAAACCCCAT
TTCTCATTTCCCAGCTTCAAGAGTCCTCTGTCCAAGATGGAGATGAACAGGGTTTCTCCAATACGCTTCCTCGTTTTCATAGCTGCATTCATGGCCGCTTCTTCCTCTTC
TTCTTCATCTGCAGGTGATTCCAAAGGAACTTTCGCAGATATGTTTGAAATGTCTTGTCCTGACGACCATTTTAAAACCTCTGAAGGTGGCCAGATCTGGCATTTATCCT
TGGACAAAGATGCAGATGTGCACGGAGAATGGAGCTGGACCGGAGAGAGATGAGCTAGACTTCGAGTTCTTGGGTAATAGAAGTGGACAGCCATATCTGATTCAGACGAA
TGTTTACAAGAACGGGACTGGCAACCGTGAGATGAGACACATGCTGTGGTTCGACCCCACAAAAGACTTCCATACCTATTCCATTCTCTGGAATGACCACAGGATTGTGT
AAGTTCTACTGTAAACTCAAGTTCCATTAAAAGCCTAAGTTAGTCATCGTCCTCCATGGCAACAAACAGCACAATTTGGGTACAAGAAATTCACTGATGTGGGCCATTCA
CTCTCACAGTCATTTAATCGAACACCTGGTGGGTGGAGTGAATGAAGCTTATGTAGAATGTTTCCCTTTTTAGGTTTTATGTGGACAGAGTACCAATAAGAGTGTACATG
AACTCAGGTAAACCAAACAACTTCTTCCCTAACGAGAAGCCCATGTACCTGTTCTCGAGCATCTGGAACGCAGATGATTGGGCTACAAGAGGCGGACTGGAGAAGACGAA
CTGGACAAAAGGGCCATTTGTATCCTCATATAAGGACTTCAATGTAGATGCCTGTCAATGGGAAGATCCATATCCGAAATGCGTATCGACAACGACAGAGAACTGGTGGG
ATCAATACGAGGCTTGGCATCTATCGGAATCTCAGAAACTGGACTATGCTTGGGTTCAGAGAAACCTTGTAATCTATGATTATTGCCAGGATAAGGAAAGGTTCCCCACT
TTGCCTTGGGAGTGTTCATTGAGTCCATGGGATTGAGGATTTGAGAACCGACCAAAATTTTGATTTCTCTTTGGCTTGGCTTTATGTCATCAACACATATAATTGCATAC
CCCCAATTCAATTGATGTATTTTGTTTGATCTTTTCCATTAGCTCGTTATTTAATTTATTCAATTGTTACAATTACCAAATTTCTTCTGGTTGATTGTTGTATGTATTAA
AGCTAATGTCCCCTGATAGTTGCGGGCTTCATTCGAGTCATATTCATAACAGTTAGTTCCTAAGGATTAGGGTTCACCTCGTTCTCTACCATGTCATCTTAAACGGTAGT
TTACCAAATTATTGTAAATCCTTCCACTTGTAGAACAGAAAAATACGTTCTCCCACCACGACCCTAAAACAAGTAAAATTCAACCTTGCCATCATGGTGTATCAATTCAC
AAAAAA
Protein sequenceShow/hide protein sequence
MQMCTENGAGPERDELDFEFLGNRSGQPYLIQTNVYKNGTGNREMRHMLWFDPTKDFHTYSILWNDHRIV