; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G006600 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G006600
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein of unknown function (DUF1218)
Genome locationchr02:5879855..5881081
RNA-Seq ExpressionLsi02G006600
SyntenyLsi02G006600
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009606 - Modifying wall lignin-1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573220.1 hypothetical protein SDJN03_27107, partial [Cucurbita argyrosperma subsp. sororia]5.5e-7683.8Show/hide
Query:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESTANKRLGLLF
        MARNYGFLVCILV+V+DAVAGLL I+AEKAQN+V L S S WV +CSRKPRDDAFSQGLAATILLGLAH IAKVLGGCI IRN QHFQ+S AN+RLGLLF
Subjt:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESTANKRLGLLF

Query:  MILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQRKPKANPSDPQHV
        MILSWITLA G S+L+AGTVDNSK KNSCEISSHGLFL GGIVCFIHGL TVAYYVSATAAYREE+RK K  PS PQHV
Subjt:  MILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQRKPKANPSDPQHV

XP_022139993.1 uncharacterized protein LOC111010766 [Momordica charantia]9.4e-7683.52Show/hide
Query:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESTANKRLGLLF
        MA+NYGFLVCILV+V+DAVAG+LGI+AEKAQNRVVL SVS WV +CSRKPRDDAFSQGLA TILLGLAH IAKVLG CICIR+KQHFQES+ANKRLGL F
Subjt:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESTANKRLGLLF

Query:  MILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQRKPKANPSDP
        MILSWITLA G S+L+AGTVDNS WKNSCEISS GLFL GGIVCF HGLCTVAYYVSATAA REEQRK   N S P
Subjt:  MILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQRKPKANPSDP

XP_022994470.1 uncharacterized protein LOC111490180 [Cucurbita maxima]2.5e-7683.24Show/hide
Query:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESTANKRLGLLF
        MARNYGFLVCILV+V+DAVAGLL I+AEKAQN+V L S S W  +CSRKPRDDAFSQGLAATILLGLAH IAKVLGGCI IRN QHFQ+S AN+RLGLLF
Subjt:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESTANKRLGLLF

Query:  MILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQRKPKANPSDPQHV
        MILSWITLA G S+L+AGTVDNSK KNSC+ISSHGLFL GGIVCFIHGLCTVAYYVSATAAYREE+RK K  PS PQHV
Subjt:  MILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQRKPKANPSDPQHV

XP_023542772.1 uncharacterized protein LOC111802580 [Cucurbita pepo subsp. pepo]8.5e-7783.8Show/hide
Query:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESTANKRLGLLF
        MA+NYGFLVCILV+V+DAVAGLL I+AEKAQN+V L S S WV +CSRKPRDDAFSQGLAATILLGLAH IAKVLGGCI IRN QHFQ+S AN+RLGLLF
Subjt:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESTANKRLGLLF

Query:  MILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQRKPKANPSDPQHV
        MILSWITLA G S+L+AGTVDNSK KNSCEISSHGLFL GGIVCFIHGLCTVAYYVSATAAYREE+RK K  PS PQHV
Subjt:  MILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQRKPKANPSDPQHV

XP_038894860.1 uncharacterized protein LOC120083260 [Benincasa hispida]1.8e-9094.97Show/hide
Query:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESTANKRLGLLF
        MARNYGFLVCILV+VIDAVAG+LGIQAEKAQNRVVL+SVS WVR CSRKPRDDAFSQGLAATILLG+AHVIAKVLGGCICIRNKQHFQESTANKRLGLLF
Subjt:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESTANKRLGLLF

Query:  MILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQRKPKANPSDPQHV
        MILSWITLA GLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQRKPKA PS+PQHV
Subjt:  MILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQRKPKANPSDPQHV

TrEMBL top hitse value%identityAlignment
A0A0A0LRQ0 Uncharacterized protein1.8e-7280.66Show/hide
Query:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGG--CICIRNKQHFQESTANKRLGL
        M RNYGFLVCILV+VIDAVAGLLGI+AEKAQNRVVL+S+S  + +CSRKPRDDAFS+GLAA+ILLGLAHVIAKVLGG  CICIRNKQ+ QE +AN+ LG 
Subjt:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGG--CICIRNKQHFQESTANKRLGL

Query:  LFMILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQRKPKANPSDPQHV
        LFMILSWITLA G S+L+A T+DNSKWKNSCEISSHGLFLGGGIVCF HGLCTVAYYVSATAAYREEQR  K  P +PQ V
Subjt:  LFMILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQRKPKANPSDPQHV

A0A1S3B4I4 uncharacterized protein LOC1034857084.9e-7078.45Show/hide
Query:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCIC--IRNKQHFQESTANKRLGL
        M RNYGFLVCILV+VID VAGLLGI+AEKAQNRVVL+S+S  V +CSRKPRDDAFS+GLAA ILLGLAHVIA VLGGC C  I NKQ+ Q+ +AN+ LGL
Subjt:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCIC--IRNKQHFQESTANKRLGL

Query:  LFMILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQRKPKANPSDPQHV
         FMILSWITL  G SLL+A T+DNSKWKNSCEISSHGLFLGGGIVCF+HGLCTVAYYVSATAAYREEQR  K +P +PQ V
Subjt:  LFMILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQRKPKANPSDPQHV

A0A6J1CGZ6 uncharacterized protein LOC1110107664.6e-7683.52Show/hide
Query:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESTANKRLGLLF
        MA+NYGFLVCILV+V+DAVAG+LGI+AEKAQNRVVL SVS WV +CSRKPRDDAFSQGLA TILLGLAH IAKVLG CICIR+KQHFQES+ANKRLGL F
Subjt:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESTANKRLGLLF

Query:  MILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQRKPKANPSDP
        MILSWITLA G S+L+AGTVDNS WKNSCEISS GLFL GGIVCF HGLCTVAYYVSATAA REEQRK   N S P
Subjt:  MILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQRKPKANPSDP

A0A6J1GRM8 uncharacterized protein LOC1114568413.9e-7583.52Show/hide
Query:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESTANKRLGLLF
        MARNYGFLVCILV+V+DAVAGLL I+AEKAQN+V L S S WV +CSRKPRDDAFSQGLAATILLGLAH IAKVLGGCI IRN QHFQ+S AN+RLGLLF
Subjt:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESTANKRLGLLF

Query:  MILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQRKPKANPSDP
        MILSWITLA G S+L+AGTVDNSK KNSC+ISSHGLFL GGIVCFIHGLCTVAYYVSATAAYREE+RK K  PS P
Subjt:  MILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQRKPKANPSDP

A0A6J1K198 uncharacterized protein LOC1114901801.2e-7683.24Show/hide
Query:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESTANKRLGLLF
        MARNYGFLVCILV+V+DAVAGLL I+AEKAQN+V L S S W  +CSRKPRDDAFSQGLAATILLGLAH IAKVLGGCI IRN QHFQ+S AN+RLGLLF
Subjt:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESTANKRLGLLF

Query:  MILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQRKPKANPSDPQHV
        MILSWITLA G S+L+AGTVDNSK KNSC+ISSHGLFL GGIVCFIHGLCTVAYYVSATAAYREE+RK K  PS PQHV
Subjt:  MILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQRKPKANPSDPQHV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05291.1 Protein of unknown function (DUF1218)5.4e-1330.9Show/hide
Query:  LVCILVVV-IDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESTANK-----RLGLLFM
        +VCI++ V +D VAG +G+QA+ AQ  V  D +     +C + P   AF  G+ A   L  AHV A V+ GC      Q       NK      +  LF+
Subjt:  LVCILVVV-IDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESTANK-----RLGLLFM

Query:  ILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQRKPKANPSDPQHV
        I  W+    G  +L  G   N++ +  C  +++ +F  GG VCF+H + +  YY+S+  A      + K N + P  +
Subjt:  ILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQRKPKANPSDPQHV

AT1G11500.1 Protein of unknown function (DUF1218)8.0e-3343.53Show/hide
Query:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQ----CSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESTANKRL
        M    GFLV ++++  D  A +LGI+AE AQ++          R     C R P D AF++G+AA +LL + HV+A VLGGC  IR+KQ F+ +TANK L
Subjt:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQ----CSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESTANKRL

Query:  GLLFMILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQ
         + F++LSWI      S L+ GT+ NS+    C +     FL GGI C  HG+ T AYYVSA AA +E++
Subjt:  GLLFMILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQ

AT2G32280.1 Protein of unknown function (DUF1218)8.6e-3543.29Show/hide
Query:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESTANKRLGLLF
        M +  G LVC+++V +D  A +LGIQAE AQN+V    +  W+ +C R+P  DAF  GL A  +L +AHV+  ++GGC+CI ++  FQ S++ +++ +  
Subjt:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESTANKRLGLLF

Query:  MILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYRE
        ++L+WI  A G   ++ GT+ NSK ++SC  + H     GGI+CF+H L  VAYYVSATAA  E
Subjt:  MILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYRE

AT4G21310.1 Protein of unknown function (DUF1218)9.5e-4250.91Show/hide
Query:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESTANKRLGLLF
        MARN GF +CIL++ +D  AG+LGI+AE AQN+V    +  W+ +C R P   AF  GLAA ILL LAHV A  LGGC+C+ ++Q  ++S+ANK+L +  
Subjt:  MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESTANKRLGLLF

Query:  MILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREE
        +I +WI LA   S+LI GT+ NS+ + +C IS H +   GGI+CF+HGL  VAYY+SATA+ RE+
Subjt:  MILSWITLATGLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCGAAACTATGGCTTTCTGGTCTGCATTTTGGTCGTGGTAATCGACGCTGTTGCCGGACTACTTGGCATTCAAGCTGAGAAGGCTCAGAATCGGGTGGTACTAGA
TTCAGTGAGCACATGGGTGCGTCAATGCAGCAGAAAACCGAGAGATGATGCTTTTAGTCAGGGGCTGGCTGCAACTATTCTGCTTGGCCTTGCTCATGTCATTGCTAAAG
TACTTGGTGGGTGCATTTGCATTAGGAATAAGCAACATTTCCAAGAATCAACTGCAAACAAGCGATTGGGATTGCTCTTCATGATTCTCTCATGGATTACTTTGGCTACT
GGGTTATCATTGTTGATAGCTGGGACGGTGGACAATTCCAAGTGGAAAAACTCATGTGAGATATCAAGTCATGGCCTGTTTTTGGGTGGTGGGATTGTGTGTTTCATTCA
TGGGCTCTGTACTGTCGCATATTATGTTTCTGCAACAGCAGCTTATAGAGAAGAACAGAGGAAACCCAAAGCAAATCCTTCTGATCCACAACATGTGTAA
mRNA sequenceShow/hide mRNA sequence
CTTGACCCCCATGGAAGGCATCTGCATCCGAAAAGAAAAGAAAAAAAAAAGAAAAAAAGAAAAGAAAAGAGAACTACAGAAAGGAAAGAAGCTTTTTTGAAAAAATTGTC
GCCATAGATGATTCCTTTCATTTATGTAATAGTGCAAGCCTGGGTTTCCTTTATTCCATCTTCCCTGTCTCCAATTCAGAGCTTTAAACCCTTTTCCCCTGATTACAAAT
CTCGGGGAAAGCTCTGAATCTGCTGCAGAAATGGCGCGAAACTATGGCTTTCTGGTCTGCATTTTGGTCGTGGTAATCGACGCTGTTGCCGGACTACTTGGCATTCAAGC
TGAGAAGGCTCAGAATCGGGTGGTACTAGATTCAGTGAGCACATGGGTGCGTCAATGCAGCAGAAAACCGAGAGATGATGCTTTTAGTCAGGGGCTGGCTGCAACTATTC
TGCTTGGCCTTGCTCATGTCATTGCTAAAGTACTTGGTGGGTGCATTTGCATTAGGAATAAGCAACATTTCCAAGAATCAACTGCAAACAAGCGATTGGGATTGCTCTTC
ATGATTCTCTCATGGATTACTTTGGCTACTGGGTTATCATTGTTGATAGCTGGGACGGTGGACAATTCCAAGTGGAAAAACTCATGTGAGATATCAAGTCATGGCCTGTT
TTTGGGTGGTGGGATTGTGTGTTTCATTCATGGGCTCTGTACTGTCGCATATTATGTTTCTGCAACAGCAGCTTATAGAGAAGAACAGAGGAAACCCAAAGCAAATCCTT
CTGATCCACAACATGTGTAACCCATTTGACAGCAGTTTCCTGTAATGACAATATAACCTCTAATTTATTAAATTTTTAAGAGATTTTGAGTCCACATCTTAGATCCCATT
GGGAATATCTACCGTTTTCCTTTTTCAGCAATTGCTAGACAGTATATCATACCACACCGATATAGGCATAATCAAAACGCG
Protein sequenceShow/hide protein sequence
MARNYGFLVCILVVVIDAVAGLLGIQAEKAQNRVVLDSVSTWVRQCSRKPRDDAFSQGLAATILLGLAHVIAKVLGGCICIRNKQHFQESTANKRLGLLFMILSWITLAT
GLSLLIAGTVDNSKWKNSCEISSHGLFLGGGIVCFIHGLCTVAYYVSATAAYREEQRKPKANPSDPQHV