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Lsi02G006680 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G006680
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description(3S,6E)-nerolidol synthase 1-like
Genome locationchr02:5981613..5981885
RNA-Seq ExpressionLsi02G006680
SyntenyLsi02G006680
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0016102 - diterpenoid biosynthetic process (biological process)
GO:0048544 - recognition of pollen (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0000287 - magnesium ion binding (molecular function)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0004674 - protein serine/threonine kinase activity (molecular function)
GO:0004712 - protein serine/threonine/tyrosine kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0010333 - terpene synthase activity (molecular function)
GO:0106310 - protein serine kinase activity (molecular function)
InterPro domainsIPR008949 - Isoprenoid synthase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN64595.2 hypothetical protein Csa_014247, partial [Cucumis sativus]1.4e-3591.57Show/hide
Query:  MGRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLME
        MGRDGSYAEYYMKEHP ISYE TQQHI+KKISEAWKTLN EHLFSN+FPT+FTQASLNIARAVPLAYNYGRNQSIMT+EKLME
Subjt:  MGRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLME

XP_016903707.1 PREDICTED: (3S,6E)-nerolidol synthase 1-like [Cucumis melo]4.1e-3591.57Show/hide
Query:  MGRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLME
        MGRDGSYAEYYMKEHP+IS E TQQHIKKKISEAWKTLN EHLFSN+FPT+FTQASLNIARAVPLAYNYGRNQSIMT+EKLME
Subjt:  MGRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLME

XP_022140154.1 (3S,6E)-nerolidol synthase 1-like [Momordica charantia]2.8e-2875.9Show/hide
Query:  GRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLMEN
        GRDGSY E YMKEHPS+S E TQQH+ KKI EAWKTLNRE+L S  FP+ FTQASLN+ARAVPLAYNYGRN+SIMT+E ++EN
Subjt:  GRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLMEN

XP_038891600.1 (3S,6E)-nerolidol synthase 1-like [Benincasa hispida]3.7e-2876.83Show/hide
Query:  GRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLME
        G DGSY +YYM EHPSISYE T+ HI ++IS AWKTLNRE+L SN F T FTQASLN+ARAVPLAYNYGRNQS++TLEKLME
Subjt:  GRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLME

XP_038893982.1 (3S,6E)-nerolidol synthase 1-like isoform X1 [Benincasa hispida]2.8e-3693.98Show/hide
Query:  MGRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLME
        MGRDGSYAEYYMKEHPSISYE TQ+HIKKKISEAWKTLNREHLFSN+FPTNFTQASLNIARAVPLAYNYGRNQ IMTLEKLM+
Subjt:  MGRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLME

TrEMBL top hitse value%identityAlignment
A0A0A0LRQ7 Uncharacterized protein6.7e-3691.57Show/hide
Query:  MGRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLME
        MGRDGSYAEYYMKEHP ISYE TQQHI+KKISEAWKTLN EHLFSN+FPT+FTQASLNIARAVPLAYNYGRNQSIMT+EKLME
Subjt:  MGRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLME

A0A1S4E662 (3S,6E)-nerolidol synthase 1-like2.0e-3591.57Show/hide
Query:  MGRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLME
        MGRDGSYAEYYMKEHP+IS E TQQHIKKKISEAWKTLN EHLFSN+FPT+FTQASLNIARAVPLAYNYGRNQSIMT+EKLME
Subjt:  MGRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLME

A0A6J1CEY1 (3S,6E)-nerolidol synthase 1-like1.4e-2875.9Show/hide
Query:  GRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLMEN
        GRDGSY E YMKEHPS+S E TQQH+ KKI EAWKTLNRE+L S  FP+ FTQASLN+ARAVPLAYNYGRN+SIMT+E ++EN
Subjt:  GRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLMEN

A0A6J1FTJ8 (3S,6E)-nerolidol synthase 1-like5.7e-2773.49Show/hide
Query:  MGRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLME
        +GRDGSYA+YYM EHPSIS+E T  H+  KIS+AWKTLN+E+L SNLFP  FTQASLNIARAVPLA NYG NQS M LEKL++
Subjt:  MGRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLME

A0A6J1JC19 (3S,6E)-nerolidol synthase 1-like7.5e-2772.29Show/hide
Query:  MGRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLME
        +G DGSYA++YM EHPSIS+E T  H+  KIS+AWKTLN+E+L SNLFP  FTQASLNIARAVPL YNYG NQS MTLEKL++
Subjt:  MGRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLME

SwissProt top hitse value%identityAlignment
B9RXW4 Probable terpene synthase 132.9e-1247.44Show/hide
Query:  GRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLE
        G DGSY E Y+KEH     E   + +   IS+AWK LN+E L  N F  NFT++ LN+AR VPL Y+Y  N  +  LE
Subjt:  GRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLE

P0CV94 (3S,6E)-nerolidol synthase 17.0e-1446.34Show/hide
Query:  GRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLME
        G DGSY   Y++EH   S E  ++     IS+ WK LNRE L  N FP +FT ASLN+AR +PL Y+Y  NQ + +L++ M+
Subjt:  GRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLME

P0CV95 (3S,6E)-nerolidol synthase 2, chloroplastic/mitochondrial4.5e-1345.12Show/hide
Query:  GRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLME
        G DGSY   Y++EH   S E  ++     IS+ WK LNRE L  N FP   T ASLN+AR +PL Y+Y  NQ + +L++ M+
Subjt:  GRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLME

P0CV96 (3S,6E)-nerolidol synthase 1, chloroplastic1.4e-1447.56Show/hide
Query:  GRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLME
        G DGSY   Y++EH   S E  ++     IS+ WK LNRE L  N FP  FT ASLN+AR +PL Y+Y  NQS+ +L++ M+
Subjt:  GRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLME

Q84UV0 S-(+)-linalool synthase, chloroplastic4.2e-1145.95Show/hide
Query:  GRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSI
        G DGSY E Y+ E+   + +  + H+ +KIS AWK LNRE L    F  +F++A LNIAR VPL Y+Y  +Q +
Subjt:  GRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSI

Arabidopsis top hitse value%identityAlignment
AT1G61680.1 terpene synthase 143.0e-1245.95Show/hide
Query:  GRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSI
        G DGSY E Y+ E+   + +  + H+ +KIS AWK LNRE L    F  +F++A LNIAR VPL Y+Y  +Q +
Subjt:  GRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSI

AT1G61680.2 terpene synthase 143.0e-1245.95Show/hide
Query:  GRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSI
        G DGSY E Y+ E+   + +  + H+ +KIS AWK LNRE L    F  +F++A LNIAR VPL Y+Y  +Q +
Subjt:  GRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCGTGATGGGTCATATGCAGAATACTACATGAAGGAACATCCAAGCATCTCTTATGAAGGCACACAACAACATATTAAGAAGAAGATTTCTGAAGCATGGAAGAC
TTTGAATAGAGAACACCTCTTTTCCAATCTCTTTCCTACCAACTTCACTCAGGCTTCTCTCAATATTGCTAGAGCTGTTCCTTTGGCATATAATTATGGTAGAAACCAAT
CTATTATGACCCTCGAGAAGCTTATGGAAAACAATATTGCTGATCTTTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCGTGATGGGTCATATGCAGAATACTACATGAAGGAACATCCAAGCATCTCTTATGAAGGCACACAACAACATATTAAGAAGAAGATTTCTGAAGCATGGAAGAC
TTTGAATAGAGAACACCTCTTTTCCAATCTCTTTCCTACCAACTTCACTCAGGCTTCTCTCAATATTGCTAGAGCTGTTCCTTTGGCATATAATTATGGTAGAAACCAAT
CTATTATGACCCTCGAGAAGCTTATGGAAAACAATATTGCTGATCTTTCGTAA
Protein sequenceShow/hide protein sequence
MGRDGSYAEYYMKEHPSISYEGTQQHIKKKISEAWKTLNREHLFSNLFPTNFTQASLNIARAVPLAYNYGRNQSIMTLEKLMENNIADLS