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Lsi02G006690 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G006690
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description(3S,6E)-nerolidol synthase 1-like
Genome locationchr02:5987233..5992813
RNA-Seq ExpressionLsi02G006690
SyntenyLsi02G006690
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0071704 - organic substance metabolic process (biological process)
GO:0000287 - magnesium ion binding (molecular function)
GO:0010333 - terpene synthase activity (molecular function)
InterPro domainsIPR001906 - Terpene synthase, N-terminal domain
IPR008930 - Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
IPR036965 - Terpene synthase, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011652894.1 myrcene synthase, chloroplastic isoform X1 [Cucumis sativus]6.8e-5071.97Show/hide
Query:  IYHQLFLASPCLKIFISQTKIPHKVYTTNAWLRLNNPLESSFAKKWSIHALDSSSSK---LISNLKFEEFGLETPLGKVKILKEMLSQTR-DLCWECLEI
        +Y Q FLASPC KIFI QTK PHKV   NAWL+LN+PLE SFA+K  IHAL+SSSS    +ISNLK EEFG+ETP  KV+ILK++L++TR DLCWE LEI
Subjt:  IYHQLFLASPCLKIFISQTKIPHKVYTTNAWLRLNNPLESSFAKKWSIHALDSSSSK---LISNLKFEEFGLETPLGKVKILKEMLSQTR-DLCWECLEI

Query:  IDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLR-QGYLVS
        IDAAQ LGIDN F+EEIE VLK QYD +NA  FDGDMDLHKAALLFRLLR Q YL+S
Subjt:  IDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLR-QGYLVS

XP_011652895.1 probable terpene synthase 13 isoform X2 [Cucumis sativus]6.8e-5071.97Show/hide
Query:  IYHQLFLASPCLKIFISQTKIPHKVYTTNAWLRLNNPLESSFAKKWSIHALDSSSSK---LISNLKFEEFGLETPLGKVKILKEMLSQTR-DLCWECLEI
        +Y Q FLASPC KIFI QTK PHKV   NAWL+LN+PLE SFA+K  IHAL+SSSS    +ISNLK EEFG+ETP  KV+ILK++L++TR DLCWE LEI
Subjt:  IYHQLFLASPCLKIFISQTKIPHKVYTTNAWLRLNNPLESSFAKKWSIHALDSSSSK---LISNLKFEEFGLETPLGKVKILKEMLSQTR-DLCWECLEI

Query:  IDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLR-QGYLVS
        IDAAQ LGIDN F+EEIE VLK QYD +NA  FDGDMDLHKAALLFRLLR Q YL+S
Subjt:  IDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLR-QGYLVS

XP_016903707.1 PREDICTED: (3S,6E)-nerolidol synthase 1-like [Cucumis melo]4.7e-5170.59Show/hide
Query:  MAQLIYHQLFLA-SPCLKIFISQTKIPHKVYTTNAWLRLNNPLESSFAKKWSIHALDSSSSK---LISNLKFEEFGLETPLGKVKILKEMLSQTR-DLCW
        MAQLIY Q FLA  P  KIFISQTKIPHK +  NAWL+LNNPLE SFA+K  IHAL+SSSS    +IS+LK EE G+ETP  KVKILKE+L++TR DLC 
Subjt:  MAQLIYHQLFLA-SPCLKIFISQTKIPHKVYTTNAWLRLNNPLESSFAKKWSIHALDSSSSK---LISNLKFEEFGLETPLGKVKILKEMLSQTR-DLCW

Query:  ECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLR-QGYLVSAVIDRDFI
        ECLEIIDAAQRLGIDN F+EEIE VLK QY  +NA HFDGD+DLHKAALLFRLLR Q YLVS  + + F+
Subjt:  ECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLR-QGYLVSAVIDRDFI

XP_038893982.1 (3S,6E)-nerolidol synthase 1-like isoform X1 [Benincasa hispida]2.1e-5977.11Show/hide
Query:  MAQLIYHQLFLASPCLKIFISQTKIPHKVYTTNAWLRL-NNPLESSFAKKWSIHALDSSSSKLISNLKFEEFGLETPLGKVKILKEMLSQTRDLCWECLE
        MAQLIYHQ  LAS   KI +SQTKIPHKV+   A L+L NNP    FAKKWSI+ALDSSSSK ISNLK EEFGLE P GKVKILKE L QTRDLCWECLE
Subjt:  MAQLIYHQLFLASPCLKIFISQTKIPHKVYTTNAWLRL-NNPLESSFAKKWSIHALDSSSSKLISNLKFEEFGLETPLGKVKILKEMLSQTRDLCWECLE

Query:  IIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLR-QGYLVSAVIDRDFI
        IIDAAQRLGIDNHF+EEIE +LK QYD +NANHFDGDMDLHKAALLFRLLR QGYLVSA + + F+
Subjt:  IIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLR-QGYLVSAVIDRDFI

XP_038893983.1 (3S,6E)-nerolidol synthase 1-like isoform X2 [Benincasa hispida]2.1e-5977.11Show/hide
Query:  MAQLIYHQLFLASPCLKIFISQTKIPHKVYTTNAWLRL-NNPLESSFAKKWSIHALDSSSSKLISNLKFEEFGLETPLGKVKILKEMLSQTRDLCWECLE
        MAQLIYHQ  LAS   KI +SQTKIPHKV+   A L+L NNP    FAKKWSI+ALDSSSSK ISNLK EEFGLE P GKVKILKE L QTRDLCWECLE
Subjt:  MAQLIYHQLFLASPCLKIFISQTKIPHKVYTTNAWLRL-NNPLESSFAKKWSIHALDSSSSKLISNLKFEEFGLETPLGKVKILKEMLSQTRDLCWECLE

Query:  IIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLR-QGYLVSAVIDRDFI
        IIDAAQRLGIDNHF+EEIE +LK QYD +NANHFDGDMDLHKAALLFRLLR QGYLVSA + + F+
Subjt:  IIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLR-QGYLVSAVIDRDFI

TrEMBL top hitse value%identityAlignment
A0A0A0LUC8 Uncharacterized protein9.7e-1861.8Show/hide
Query:  KVKILKEMLSQTRDLCWECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLR-QGYLVSAVIDRDFIFK
        K +ILK++L +  D  WECL +IDA QRLGID HFQEEIEAVL+ QY   NA  ++ D DLHKAALLFRL R QGYLVSA + + F+ K
Subjt:  KVKILKEMLSQTRDLCWECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLR-QGYLVSAVIDRDFIFK

A0A0A0LX82 Terpene_synth domain-containing protein3.3e-5071.97Show/hide
Query:  IYHQLFLASPCLKIFISQTKIPHKVYTTNAWLRLNNPLESSFAKKWSIHALDSSSSK---LISNLKFEEFGLETPLGKVKILKEMLSQTR-DLCWECLEI
        +Y Q FLASPC KIFI QTK PHKV   NAWL+LN+PLE SFA+K  IHAL+SSSS    +ISNLK EEFG+ETP  KV+ILK++L++TR DLCWE LEI
Subjt:  IYHQLFLASPCLKIFISQTKIPHKVYTTNAWLRLNNPLESSFAKKWSIHALDSSSSK---LISNLKFEEFGLETPLGKVKILKEMLSQTR-DLCWECLEI

Query:  IDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLR-QGYLVS
        IDAAQ LGIDN F+EEIE VLK QYD +NA  FDGDMDLHKAALLFRLLR Q YL+S
Subjt:  IDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLR-QGYLVS

A0A1S3B3I5 (3S,6E)-nerolidol synthase 1-like5.7e-1848.89Show/hide
Query:  LNNPLESSFAKKWSIHALDSSSSKLISNL---KFEEFGLETPLGKVK--ILKEMLSQTRDLCWECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANH
        +NNPL +        H+L S+  K + +         G+E   G +K  ILK++L +  D  WECL +IDA QRLGID HFQEEIEAVL+ QY   NA  
Subjt:  LNNPLESSFAKKWSIHALDSSSSKLISNL---KFEEFGLETPLGKVK--ILKEMLSQTRDLCWECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANH

Query:  FDGDMDLHKAALLFRLLR-QGYLVSAVIDRDFIFK
        F+ + DLHKAALLFRL R QGYLVSA + + F+ K
Subjt:  FDGDMDLHKAALLFRLLR-QGYLVSAVIDRDFIFK

A0A1S4E662 (3S,6E)-nerolidol synthase 1-like2.3e-5170.59Show/hide
Query:  MAQLIYHQLFLA-SPCLKIFISQTKIPHKVYTTNAWLRLNNPLESSFAKKWSIHALDSSSSK---LISNLKFEEFGLETPLGKVKILKEMLSQTR-DLCW
        MAQLIY Q FLA  P  KIFISQTKIPHK +  NAWL+LNNPLE SFA+K  IHAL+SSSS    +IS+LK EE G+ETP  KVKILKE+L++TR DLC 
Subjt:  MAQLIYHQLFLA-SPCLKIFISQTKIPHKVYTTNAWLRLNNPLESSFAKKWSIHALDSSSSK---LISNLKFEEFGLETPLGKVKILKEMLSQTR-DLCW

Query:  ECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLR-QGYLVSAVIDRDFI
        ECLEIIDAAQRLGIDN F+EEIE VLK QY  +NA HFDGD+DLHKAALLFRLLR Q YLVS  + + F+
Subjt:  ECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLR-QGYLVSAVIDRDFI

A0A5D3BI68 (3S,6E)-nerolidol synthase 1-like5.7e-1859.18Show/hide
Query:  GLETPLGKVK--ILKEMLSQTRDLCWECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLR-QGYLVSAVIDRDFIFK
        G+E   G +K  ILK++L +  D  WECL +IDA QRLGID HFQEEIEAVL+ QY   NA  F+ + DLHKAALLFRL R QGYLVSA + + F+ K
Subjt:  GLETPLGKVK--ILKEMLSQTRDLCWECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLR-QGYLVSAVIDRDFIFK

SwissProt top hitse value%identityAlignment
B9RXW4 Probable terpene synthase 132.1e-0937.09Show/hide
Query:  LASPCLKIFISQTKIPHKVYTTNAWLRLNN-PLESSF-AKKWSIH-ALDSSSSKLISNLKFEEFGLETPLGKVKILKEMLSQTRDLCWECLEIIDAAQRL
        +A   + IFI     P     T+  L  N+   +S+F    WSI+  L S  S    +L  E+  ++    + +  K +L +  +   E L +IDA QRL
Subjt:  LASPCLKIFISQTKIPHKVYTTNAWLRLNN-PLESSF-AKKWSIH-ALDSSSSKLISNLKFEEFGLETPLGKVKILKEMLSQTRDLCWECLEIIDAAQRL

Query:  GIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLRQ-GYLVSA
        GID+HFQ+EI+ +L+ QY   +   +  D DLH  AL FRLLRQ GY VSA
Subjt:  GIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLRQ-GYLVSA

J7LJN5 Beta-caryophyllene synthase6.7e-0845.68Show/hide
Query:  LKEMLSQTRDLCWECLEIIDAAQRLGIDNHFQEEIEAVLKSQY-----DFMNANHFDGDMDLHKAALLFRLLR-QGYLVSA
        ++++L  T D   + LE+IDA QRLG+D+HFQ+EIE  L+  Y     D  + +H     DLH  AL FRLLR QGY +S+
Subjt:  LKEMLSQTRDLCWECLEIIDAAQRLGIDNHFQEEIEAVLKSQY-----DFMNANHFDGDMDLHKAALLFRLLR-QGYLVSA

P0CV94 (3S,6E)-nerolidol synthase 13.9e-0843.68Show/hide
Query:  KVKILKEMLSQTRDL-CWECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLRQ-GYLVSAVIDRDF
        K+++LK +L    +L   E L +IDA QRLGID +FQ EI+ +L  Q   ++A       DLH+ AL FRLLRQ GY V   +  +F
Subjt:  KVKILKEMLSQTRDL-CWECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLRQ-GYLVSAVIDRDF

P0CV95 (3S,6E)-nerolidol synthase 2, chloroplastic/mitochondrial6.7e-0842.53Show/hide
Query:  KVKILKEMLSQTRDL-CWECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLRQ-GYLVSAVIDRDF
        K+++ + +L    +L   E L +IDA QRLGID HFQ EI+ +L  Q   ++A+      DLH+ AL FRLLRQ GY V   +  +F
Subjt:  KVKILKEMLSQTRDL-CWECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLRQ-GYLVSAVIDRDF

Q84UV0 S-(+)-linalool synthase, chloroplastic7.9e-0940.17Show/hide
Query:  SIHALDSSSSKLISNLKFEEFGLETPLGKVKILKEMLSQTRDLCWECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLR
        ++HA  S+ SK   N    E+  E     +K +K +LS   D+  E LE+ID  Q LGID HF++EIE  L   Y       F+G  DLH+ AL FRLLR
Subjt:  SIHALDSSSSKLISNLKFEEFGLETPLGKVKILKEMLSQTRDLCWECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLR

Query:  Q-GYLVSAVIDRDFIFK
        Q G+ V  +I ++ + K
Subjt:  Q-GYLVSAVIDRDFIFK

Arabidopsis top hitse value%identityAlignment
AT1G61680.1 terpene synthase 145.6e-1040.17Show/hide
Query:  SIHALDSSSSKLISNLKFEEFGLETPLGKVKILKEMLSQTRDLCWECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLR
        ++HA  S+ SK   N    E+  E     +K +K +LS   D+  E LE+ID  Q LGID HF++EIE  L   Y       F+G  DLH+ AL FRLLR
Subjt:  SIHALDSSSSKLISNLKFEEFGLETPLGKVKILKEMLSQTRDLCWECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLR

Query:  Q-GYLVSAVIDRDFIFK
        Q G+ V  +I ++ + K
Subjt:  Q-GYLVSAVIDRDFIFK

AT1G61680.2 terpene synthase 146.2e-0942.57Show/hide
Query:  SIHALDSSSSKLISNLKFEEFGLETPLGKVKILKEMLSQTRDLCWECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLR
        ++HA  S+ SK   N    E+  E     +K +K +LS   D+  E LE+ID  Q LGID HF++EIE  L   Y       F+G  DLH+ AL FRLLR
Subjt:  SIHALDSSSSKLISNLKFEEFGLETPLGKVKILKEMLSQTRDLCWECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLR

Query:  Q
        Q
Subjt:  Q

AT2G24210.1 terpene synthase 107.6e-0735.78Show/hide
Query:  KWSIHALDSSSSKLISNLKFEEFGLETPLGKVKILKEMLSQTRDLCWECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRL
        +W  H L S  +K   + +      E  L K K+ ++ML+  +    + LE ID  Q+LG+  HF+ EI+ +L S Y     N    + DLH  AL FRL
Subjt:  KWSIHALDSSSSKLISNLKFEEFGLETPLGKVKILKEMLSQTRDLCWECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRL

Query:  LRQ-GYLVS
         RQ G+ VS
Subjt:  LRQ-GYLVS

AT3G25810.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein4.9e-0640.66Show/hide
Query:  KILKEMLSQTRDLCWECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHF---DGDMDLHKAALLFRLLRQ-GYLVSAVIDRDFIFKI
        K+L+E+ +++R    E LE+ID  Q+LG+  HF++EI  +L + +   N  +    D + DLH  AL FRLLRQ G+ VS  I    I KI
Subjt:  KILKEMLSQTRDLCWECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHF---DGDMDLHKAALLFRLLRQ-GYLVSAVIDRDFIFKI

AT3G25820.1 terpene synthase-like sequence-1,8-cineole1.1e-0541.77Show/hide
Query:  KILKEMLSQTRDLCWECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHF--DGDMDLHKAALLFRLLRQ-GYLVS
        K +K ML   +    E LE+ID  Q+LG+  HF+ EI   L   +  M  N +  D + DLH  +L FRLLRQ G+ VS
Subjt:  KILKEMLSQTRDLCWECLEIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHF--DGDMDLHKAALLFRLLRQ-GYLVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTATACTCATATATTCATATATTCATATTCTATGGCCCAACTCATTTATCATCAACTCTTCCTTGCTTCTCCCTGCCTAAAAATATTCATATCTCAAACAAAAAT
TCCTCACAAAGTTTACACTACCAACGCATGGCTGCGATTGAATAATCCTCTTGAAAGTTCTTTTGCTAAAAAATGGAGCATTCATGCCTTGGATTCTTCTTCCTCGAAGC
TGATCTCCAATTTGAAATTTGAGGAGTTTGGGCTTGAAACTCCATTGGGTAAAGTGAAGATTTTAAAGGAAATGCTAAGCCAAACAAGAGATTTGTGTTGGGAATGTTTG
GAAATAATTGATGCAGCCCAACGGCTTGGCATTGACAATCACTTCCAAGAGGAGATTGAGGCTGTTCTTAAGAGTCAATACGATTTTATGAATGCAAACCATTTTGATGG
AGACATGGATCTTCACAAAGCTGCCCTTCTTTTTCGACTTTTGAGACAAGGATACCTTGTGTCCGCAGTGATTGATAGAGATTTTATTTTTAAAATCTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGTATACTCATATATTCATATATTCATATTCTATGGCCCAACTCATTTATCATCAACTCTTCCTTGCTTCTCCCTGCCTAAAAATATTCATATCTCAAACAAAAAT
TCCTCACAAAGTTTACACTACCAACGCATGGCTGCGATTGAATAATCCTCTTGAAAGTTCTTTTGCTAAAAAATGGAGCATTCATGCCTTGGATTCTTCTTCCTCGAAGC
TGATCTCCAATTTGAAATTTGAGGAGTTTGGGCTTGAAACTCCATTGGGTAAAGTGAAGATTTTAAAGGAAATGCTAAGCCAAACAAGAGATTTGTGTTGGGAATGTTTG
GAAATAATTGATGCAGCCCAACGGCTTGGCATTGACAATCACTTCCAAGAGGAGATTGAGGCTGTTCTTAAGAGTCAATACGATTTTATGAATGCAAACCATTTTGATGG
AGACATGGATCTTCACAAAGCTGCCCTTCTTTTTCGACTTTTGAGACAAGGATACCTTGTGTCCGCAGTGATTGATAGAGATTTTATTTTTAAAATCTATTAA
Protein sequenceShow/hide protein sequence
MMYTHIFIYSYSMAQLIYHQLFLASPCLKIFISQTKIPHKVYTTNAWLRLNNPLESSFAKKWSIHALDSSSSKLISNLKFEEFGLETPLGKVKILKEMLSQTRDLCWECL
EIIDAAQRLGIDNHFQEEIEAVLKSQYDFMNANHFDGDMDLHKAALLFRLLRQGYLVSAVIDRDFIFKIY