; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G007000 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G007000
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAAA domain-containing protein
Genome locationchr02:6244562..6245179
RNA-Seq ExpressionLsi02G007000
SyntenyLsi02G007000
Gene Ontology termsNA
InterPro domainsIPR022251 - Protein of unknown function wound-induced


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD26534.1 TPA_asm: hypothetical protein HUJ06_028002 [Nelumbo nucifera]3.7e-0444.05Show/hide
Query:  MSYLRRAWMGAASLSVVESGHANDHFSKWNSETLFQSSKLQNEDTAAQKLGYNSFGNGKDGDN-KIKAEDSLHKVMYLNCWTQS
        M+Y+ R WM AAS+++V+ GH +  F KWNS    Q S  +   +   KL + +F  G  GD+ + +A++SL KVMYLNCW+QS
Subjt:  MSYLRRAWMGAASLSVVESGHANDHFSKWNSETLFQSSKLQNEDTAAQKLGYNSFGNGKDGDN-KIKAEDSLHKVMYLNCWTQS

KAA0056938.1 hypothetical protein E6C27_scaffold96G001150 [Cucumis melo var. makuwa]3.9e-0947.06Show/hide
Query:  MGAASLSVVESGHAND---HFSKWNS----ETLFQSSKL----QNEDTAAQKLGYNSF----------------GNGKDGDNKIKAEDSLHKVMYLNCWT
        MGAAS+ V+ES HAN+    FSKWN+    +++FQS  L     +E  AAQKLG  S                 G G  G +  +AEDSLHKVMYLNCWT
Subjt:  MGAASLSVVESGHAND---HFSKWNS----ETLFQSSKL----QNEDTAAQKLGYNSF----------------GNGKDGDNKIKAEDSLHKVMYLNCWT

Query:  QS
        QS
Subjt:  QS

KAG6584036.1 hypothetical protein SDJN03_19968, partial [Cucurbita argyrosperma subsp. sororia]1.7e-2570.33Show/hide
Query:  KRENKRKMSYLRRAWMGAASLSVVESGHANDHFSKWNSETLFQSS-KLQNEDTAAQKLGYNSFGNGKDGDNKIKAEDSLHKVMYLNCWTQS
        + E ++KMSYL RA M AAS++VVE GHA DHFSKWNSETLF+S  + QNEDTA+Q+LG  S G GKDG+  +KAEDSLHKVMYLNCWTQS
Subjt:  KRENKRKMSYLRRAWMGAASLSVVESGHANDHFSKWNSETLFQSS-KLQNEDTAAQKLGYNSFGNGKDGDNKIKAEDSLHKVMYLNCWTQS

KAG7019648.1 hypothetical protein SDJN02_18611, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-2473.81Show/hide
Query:  MSYLRRAWMGAASLSVVESGHANDHFSKWNSETLFQSS-KLQNEDTAAQKLGYNSFGNGKDGDNKIKAEDSLHKVMYLNCWTQS
        MSYL RA M AAS++VVE GHA DHFSKWNSETLF+S  + QNEDTA+Q+LG  S G GKDG+  +KAEDSLHKVMYLNCWTQS
Subjt:  MSYLRRAWMGAASLSVVESGHANDHFSKWNSETLFQSS-KLQNEDTAAQKLGYNSFGNGKDGDNKIKAEDSLHKVMYLNCWTQS

KFK45076.1 hypothetical protein AALP_AA1G340200 [Arabis alpina]8.3e-0437.63Show/hide
Query:  KRENKRKMSYLRRAWMGAASLSVVESGHANDHFSKWNSETLFQSSKLQN---EDTAAQKLGYNS---FGNGKDGDNKIKAEDSLHKVMYLNCW
        K+  KRKMS   +AW+ AAS+ VVE+        +WN      + +++N     + A K   +S   F +GKD   K +AE+SL  VMYL+CW
Subjt:  KRENKRKMSYLRRAWMGAASLSVVESGHANDHFSKWNSETLFQSSKLQN---EDTAAQKLGYNS---FGNGKDGDNKIKAEDSLHKVMYLNCW

TrEMBL top hitse value%identityAlignment
A0A087HSH4 AAA domain-containing protein4.0e-0437.63Show/hide
Query:  KRENKRKMSYLRRAWMGAASLSVVESGHANDHFSKWNSETLFQSSKLQN---EDTAAQKLGYNS---FGNGKDGDNKIKAEDSLHKVMYLNCW
        K+  KRKMS   +AW+ AAS+ VVE+        +WN      + +++N     + A K   +S   F +GKD   K +AE+SL  VMYL+CW
Subjt:  KRENKRKMSYLRRAWMGAASLSVVESGHANDHFSKWNSETLFQSSKLQN---EDTAAQKLGYNS---FGNGKDGDNKIKAEDSLHKVMYLNCW

A0A0A0LS84 Uncharacterized protein3.1e-1252.17Show/hide
Query:  MSYLRRAWMGAASLSVVESGHA-NDHFSKWNSETLFQSSKLQNEDTAAQKLG----YNSFGNGKDGDNKIK----AEDSLHKVMYLNCWTQS
        MSYLRRAWMGAAS+ V+ES +A ND +  + S+   Q  +   E  AAQ+LG    ++ +G G +G  + K    AEDSLHKVMYLNCWTQS
Subjt:  MSYLRRAWMGAASLSVVESGHA-NDHFSKWNSETLFQSSKLQNEDTAAQKLG----YNSFGNGKDGDNKIK----AEDSLHKVMYLNCWTQS

A0A5A7UPA3 Uncharacterized protein1.9e-0947.06Show/hide
Query:  MGAASLSVVESGHAND---HFSKWNS----ETLFQSSKL----QNEDTAAQKLGYNSF----------------GNGKDGDNKIKAEDSLHKVMYLNCWT
        MGAAS+ V+ES HAN+    FSKWN+    +++FQS  L     +E  AAQKLG  S                 G G  G +  +AEDSLHKVMYLNCWT
Subjt:  MGAASLSVVESGHAND---HFSKWNS----ETLFQSSKL----QNEDTAAQKLGYNSF----------------GNGKDGDNKIKAEDSLHKVMYLNCWT

Query:  QS
        QS
Subjt:  QS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G10265.1 Wound-responsive family protein5.2e-0436.78Show/hide
Query:  MSYLRRAWMGAASLSVVESGHANDHFSKWNSETLFQSSKLQN---EDTAAQKLGYNSFGNGKDGDNKIK-AEDSLHKVMYLNCWTQS
        MS   + WM AAS+  VE+        +WN      +  L+N     + A+KL  +S     D  NK K AE+SL  VMYL+CW  S
Subjt:  MSYLRRAWMGAASLSVVESGHANDHFSKWNSETLFQSSKLQN---EDTAAQKLGYNSFGNGKDGDNKIK-AEDSLHKVMYLNCWTQS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGTCACAAAGAAAAGGAAGCTGGAAAAAGCCAGAATTCCCCTTATCCACAATTTAGAGAGATCAGAGTCAAGGATTTTTGGCAAAAGAGAAAATAAAAGGAAAAT
GAGCTATTTGAGGAGAGCTTGGATGGGTGCGGCCAGTTTGAGTGTGGTGGAAAGTGGGCACGCCAATGATCATTTCTCCAAATGGAACTCTGAGACTCTGTTTCAATCGT
CCAAGCTTCAGAATGAGGACACGGCGGCTCAGAAACTTGGCTACAACAGCTTTGGTAATGGAAAAGATGGGGATAACAAGATTAAGGCTGAAGATTCTCTTCATAAAGTC
ATGTACTTGAATTGCTGGACACAGAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGTCACAAAGAAAAGGAAGCTGGAAAAAGCCAGAATTCCCCTTATCCACAATTTAGAGAGATCAGAGTCAAGGATTTTTGGCAAAAGAGAAAATAAAAGGAAAAT
GAGCTATTTGAGGAGAGCTTGGATGGGTGCGGCCAGTTTGAGTGTGGTGGAAAGTGGGCACGCCAATGATCATTTCTCCAAATGGAACTCTGAGACTCTGTTTCAATCGT
CCAAGCTTCAGAATGAGGACACGGCGGCTCAGAAACTTGGCTACAACAGCTTTGGTAATGGAAAAGATGGGGATAACAAGATTAAGGCTGAAGATTCTCTTCATAAAGTC
ATGTACTTGAATTGCTGGACACAGAGCTGA
Protein sequenceShow/hide protein sequence
MKVTKKRKLEKARIPLIHNLERSESRIFGKRENKRKMSYLRRAWMGAASLSVVESGHANDHFSKWNSETLFQSSKLQNEDTAAQKLGYNSFGNGKDGDNKIKAEDSLHKV
MYLNCWTQS