; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G007140 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G007140
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCttnbp 2 amino-terminal-like protein
Genome locationchr02:6427254..6431557
RNA-Seq ExpressionLsi02G007140
SyntenyLsi02G007140
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584016.1 hypothetical protein SDJN03_19948, partial [Cucurbita argyrosperma subsp. sororia]1.8e-8193.12Show/hide
Query:  NFSETVRYNMGEEGYGWSPIGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHGGGRTHLDPEAQMGFAGKLAHPSPK
        N SET   NMGEEGYGWSP GAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSH G RTHLDPEAQMGFAGKL HPSPK
Subjt:  NFSETVRYNMGEEGYGWSPIGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHGGGRTHLDPEAQMGFAGKLAHPSPK

Query:  MTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDISNATTSSHFTENSSSL
        MTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHND+S ATTSSH TENSSSL
Subjt:  MTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDISNATTSSHFTENSSSL

XP_022139852.1 uncharacterized protein LOC111010664 [Momordica charantia]1.1e-7887.27Show/hide
Query:  MPKWENFSETVRYNMGEEGYGWSPIGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHGGGRTHLDPEAQMGFAGKLA
        M K  NFSET R++MGEE YGWSPIGAPLD+ REDHWRHFDNSVDAVSFGFVATAILVSMFL+MAIFERFLRP PTAFSH  GR+HLDPEAQ+ FAGKL 
Subjt:  MPKWENFSETVRYNMGEEGYGWSPIGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHGGGRTHLDPEAQMGFAGKLA

Query:  HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDISNATTSSHFTENSSSL
        HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHN  S ATTSSH TENSSSL
Subjt:  HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDISNATTSSHFTENSSSL

XP_022927571.1 uncharacterized protein LOC111434363 [Cucurbita moschata]3.1e-8193.12Show/hide
Query:  NFSETVRYNMGEEGYGWSPIGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHGGGRTHLDPEAQMGFAGKLAHPSPK
        N SET   NMGEEGYGWSP GAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSH G RTHLDPEAQMGFAGKL HPSPK
Subjt:  NFSETVRYNMGEEGYGWSPIGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHGGGRTHLDPEAQMGFAGKLAHPSPK

Query:  MTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDISNATTSSHFTENSSSL
        MTVYSCGVSVLMPGDHIPTYIAHPAPV CPPERIPWPQHQHND+S ATTSSHFTENSSSL
Subjt:  MTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDISNATTSSHFTENSSSL

XP_023001755.1 uncharacterized protein LOC111495798 [Cucurbita maxima]9.6e-8393.75Show/hide
Query:  NFSETVRYNMGEEGYGWSPIGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHGGGRTHLDPEAQMGFAGKLAHPSPK
        N SET  +NMGEEGYGWSP GAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSH G RTHLDPEAQMGFAGKL HPSPK
Subjt:  NFSETVRYNMGEEGYGWSPIGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHGGGRTHLDPEAQMGFAGKLAHPSPK

Query:  MTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDISNATTSSHFTENSSSL
        MTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHND+S ATTSSHFTENSSSL
Subjt:  MTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDISNATTSSHFTENSSSL

XP_023519551.1 uncharacterized protein LOC111782932 [Cucurbita pepo subsp. pepo]3.6e-8293.75Show/hide
Query:  NFSETVRYNMGEEGYGWSPIGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHGGGRTHLDPEAQMGFAGKLAHPSPK
        N SET  +NMGEEGYGWSP GAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSH G RTHLDPEAQMGFAGKL H SPK
Subjt:  NFSETVRYNMGEEGYGWSPIGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHGGGRTHLDPEAQMGFAGKLAHPSPK

Query:  MTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDISNATTSSHFTENSSSL
        MTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDIS+ATTSSHFTENSSSL
Subjt:  MTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDISNATTSSHFTENSSSL

TrEMBL top hitse value%identityAlignment
A0A0A0LRU5 Uncharacterized protein9.0e-7995.33Show/hide
Query:  MGEEGYGWSPIGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHGGGRTHLDPEAQMGFAGKLAHPSPKMTVYSCGVS
        MGEEGYGWSPIGAPLDVQ+EDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSH GGRTHLDPEAQMGFAGKLAHPSPKMTVYSCGVS
Subjt:  MGEEGYGWSPIGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHGGGRTHLDPEAQMGFAGKLAHPSPKMTVYSCGVS

Query:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDISNATTSSHFTENSSS
        VLMPGDHIPTYIAHPAPVPC PERIPWPQHQHNDIS  T SSHF ENSSS
Subjt:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDISNATTSSHFTENSSS

A0A5D3DRS2 Uncharacterized protein1.0e-7794Show/hide
Query:  MGEEGYGWSPIGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHGGGRTHLDPEAQMGFAGKLAHPSPKMTVYSCGVS
        MGEEGYGWSPIGAPLDVQ+EDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSH GGRTHLDPEAQMGF GKLAHPSPKMTVYSCGVS
Subjt:  MGEEGYGWSPIGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHGGGRTHLDPEAQMGFAGKLAHPSPKMTVYSCGVS

Query:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDISNATTSSHFTENSSS
        VLMPGDHIPTYIAHPAPVPC PERIPWPQHQHNDIS  T SSH TE+SSS
Subjt:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDISNATTSSHFTENSSS

A0A6J1CF31 uncharacterized protein LOC1110106645.3e-7987.27Show/hide
Query:  MPKWENFSETVRYNMGEEGYGWSPIGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHGGGRTHLDPEAQMGFAGKLA
        M K  NFSET R++MGEE YGWSPIGAPLD+ REDHWRHFDNSVDAVSFGFVATAILVSMFL+MAIFERFLRP PTAFSH  GR+HLDPEAQ+ FAGKL 
Subjt:  MPKWENFSETVRYNMGEEGYGWSPIGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHGGGRTHLDPEAQMGFAGKLA

Query:  HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDISNATTSSHFTENSSSL
        HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHN  S ATTSSH TENSSSL
Subjt:  HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDISNATTSSHFTENSSSL

A0A6J1EI19 uncharacterized protein LOC1114343631.5e-8193.12Show/hide
Query:  NFSETVRYNMGEEGYGWSPIGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHGGGRTHLDPEAQMGFAGKLAHPSPK
        N SET   NMGEEGYGWSP GAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSH G RTHLDPEAQMGFAGKL HPSPK
Subjt:  NFSETVRYNMGEEGYGWSPIGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHGGGRTHLDPEAQMGFAGKLAHPSPK

Query:  MTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDISNATTSSHFTENSSSL
        MTVYSCGVSVLMPGDHIPTYIAHPAPV CPPERIPWPQHQHND+S ATTSSHFTENSSSL
Subjt:  MTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDISNATTSSHFTENSSSL

A0A6J1KM25 uncharacterized protein LOC1114957984.6e-8393.75Show/hide
Query:  NFSETVRYNMGEEGYGWSPIGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHGGGRTHLDPEAQMGFAGKLAHPSPK
        N SET  +NMGEEGYGWSP GAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSH G RTHLDPEAQMGFAGKL HPSPK
Subjt:  NFSETVRYNMGEEGYGWSPIGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHGGGRTHLDPEAQMGFAGKLAHPSPK

Query:  MTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDISNATTSSHFTENSSSL
        MTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHND+S ATTSSHFTENSSSL
Subjt:  MTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDISNATTSSHFTENSSSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G09812.1 unknown protein1.8e-1845.53Show/hide
Query:  WSPIGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFS--HGGGRTHLDPEAQMGFAGKLAHPSPKMTVYSCGVSVLMPG
        WS I +P +   E  WR    S++A+SFGFVATAIL+SMFL+MAIFE   RP  ++F   H   +   D  +Q       A   P  TV    VSV+MPG
Subjt:  WSPIGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFS--HGGGRTHLDPEAQMGFAGKLAHPSPKMTVYSCGVSVLMPG

Query:  DHIPTYIAHPAPVPCPPERIPWP
        + +P++IA PAP+PC  E I WP
Subjt:  DHIPTYIAHPAPVPCPPERIPWP

AT1G11120.1 unknown protein1.0e-3447.67Show/hide
Query:  WSPIGAPLDVQREDHWR-HFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSH---GGGRTHLDPEAQMGFAG---KLAHPSPK---------
        W PIGAP++++RE+ W+  FD+SV+AVSFGFVATAIL+SMFL+MAIFER +R T T+ ++      R     ++++GF G   KL + SPK         
Subjt:  WSPIGAPLDVQREDHWR-HFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSH---GGGRTHLDPEAQMGFAG---KLAHPSPK---------

Query:  -----------------MTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDISNATTSSHFTE
                         MTVYS GVSVLMPGD IPT+IAHPAPVPCPP+ I   QHQH    ++++S+   E
Subjt:  -----------------MTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDISNATTSSHFTE

AT1G11120.2 unknown protein5.3e-3956.16Show/hide
Query:  WSPIGAPLDVQREDHWR-HFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSH---GGGRTHLDPEAQMGFAG---KLAHPSPKMTVYSCGVS
        W PIGAP++++RE+ W+  FD+SV+AVSFGFVATAIL+SMFL+MAIFER +R T T+ ++      R     ++++GF G   KL + SPKMTVYS GVS
Subjt:  WSPIGAPLDVQREDHWR-HFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSH---GGGRTHLDPEAQMGFAG---KLAHPSPKMTVYSCGVS

Query:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDISNATTSSHFTE
        VLMPGD IPT+IAHPAPVPCPP+ I   QHQH    ++++S+   E
Subjt:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDISNATTSSHFTE

AT1G58007.1 unknown protein1.1e-1544.66Show/hide
Query:  NSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHGGGRTHLDPEAQMGFAGKLAHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPW
        +S++A+SFGFVATAIL+ MF++MAI E   R      S       +D  +Q     KLA  +  + V +  VSV+MPGD +P+Y+A PAP PC  E I W
Subjt:  NSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHGGGRTHLDPEAQMGFAGKLAHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPW

Query:  PQH
        P H
Subjt:  PQH

AT1G58007.2 unknown protein1.1e-1544.66Show/hide
Query:  NSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHGGGRTHLDPEAQMGFAGKLAHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPW
        +S++A+SFGFVATAIL+ MF++MAI E   R      S       +D  +Q     KLA  +  + V +  VSV+MPGD +P+Y+A PAP PC  E I W
Subjt:  NSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHGGGRTHLDPEAQMGFAGKLAHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPW

Query:  PQH
        P H
Subjt:  PQH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCAAATGGGAAAATTTCTCTGAAACTGTACGGTATAATATGGGTGAAGAAGGCTATGGATGGTCCCCAATTGGGGCTCCTCTTGACGTCCAGAGAGAGGACCACTG
GAGGCATTTCGACAACTCCGTTGATGCAGTCTCTTTTGGGTTTGTAGCCACTGCCATTCTCGTCTCAATGTTCTTGCTCATGGCCATCTTTGAAAGGTTTTTGCGACCTA
CTCCCACTGCTTTCTCTCACGGCGGCGGTCGGACCCACCTTGACCCCGAGGCTCAGATGGGGTTCGCTGGAAAGCTTGCCCACCCATCACCCAAAATGACTGTGTATTCC
TGTGGAGTTTCAGTGCTAATGCCTGGAGATCATATTCCTACATATATTGCCCACCCGGCTCCAGTCCCGTGTCCGCCCGAACGCATTCCATGGCCACAACATCAACACAA
TGACATATCCAATGCCACCACCAGCTCCCATTTCACTGAAAACTCAAGTTCCTTGTGA
mRNA sequenceShow/hide mRNA sequence
CACTTTTCTTTTTCCATTTTTATCCTTCAATCATCTTCTCCGTATGTGCAATGGCAAAGAGGTAGATACTCTTTACAATGCAACTGTAGCTTTGGTTTTGCAAATGGTGA
AACTGTAAAATGGTGGAAGTCAAATGGAATCTGAAACTTGCAAAATTTTCAGGGCAAAACTAAAAGAAAACAACCATTTTTCCAAATGCGACAATGGAATTCCAAATTCC
CAAACAAAAGCAATCCAAATTCCAAAGCCCCCTTTTCACCTTCCAGTAAACTCTCTGGAATTTTGTTGTGGGTGGCAATGGTAGCCCACATCTTCATTCTCTCTCCTCTC
TCTCTCCTCTCTGTTTCGGGCCTATATTACAAGTTCAGTACCTGCTCAAGTTTTTTATAGCAGCGAAAAGCTTTAACTAACCACTCCCAATACTCTTCCCTCCCCCTTCT
TCTTCTCCCTAATTAAGCTGCCATGAGCTACAAAACCAGCTATGCCCAAATGGGAAAATTTCTCTGAAACTGTACGGTATAATATGGGTGAAGAAGGCTATGGATGGTCC
CCAATTGGGGCTCCTCTTGACGTCCAGAGAGAGGACCACTGGAGGCATTTCGACAACTCCGTTGATGCAGTCTCTTTTGGGTTTGTAGCCACTGCCATTCTCGTCTCAAT
GTTCTTGCTCATGGCCATCTTTGAAAGGTTTTTGCGACCTACTCCCACTGCTTTCTCTCACGGCGGCGGTCGGACCCACCTTGACCCCGAGGCTCAGATGGGGTTCGCTG
GAAAGCTTGCCCACCCATCACCCAAAATGACTGTGTATTCCTGTGGAGTTTCAGTGCTAATGCCTGGAGATCATATTCCTACATATATTGCCCACCCGGCTCCAGTCCCG
TGTCCGCCCGAACGCATTCCATGGCCACAACATCAACACAATGACATATCCAATGCCACCACCAGCTCCCATTTCACTGAAAACTCAAGTTCCTTGTGAAATCAAAGAAA
CTGAAGATGGAAAAGAGGTCTGTTCTGTAACAAATCTACTAGTTACGATTGATTCAAGCAAAACTAATCTCCAAAACCCAGTAGTCAGAAAGGTACCGTTGAGGCTGTTT
TTTCCCCCATTTCCAGAGGTTCTTATTCTGTACATACGCTCACCTCACAGCCCGCCTTGCTTTACCTCATCTGACTACATTGCCTTCTTCAAGATAGCAAGTTTCACCAT
TTTTATGCCTTCCACAAGGTTAAGCTTTTATCTCTTTTTTGCCTCTTCAAATTTGGCTTGAAGCCTCAGCAATCATATAGAAATTCCTGATTGTGAGGAGTTGCGCAATG
TCAAGTGGTACCCAGGTTTAGTCGAACTTCAACTGTCGAGATATATATGAAATGTGTATTCGTTTCTTTTATTTTCAATGTTTATCCAAGCTGTTTCTACTTAAATCAGT
CAAAAACTTTGTTCTTCCTTTGCACACAATGATAATATCAAAATGATATGTTGTTGAAATTGGTTTTAGGAAAAGTTACAAGAATTGCCCAAGAGTGTAAGGAAATAGCA
TGGTTCATAATCCCACATAGAGAAATTATTTATTTATTTTAATGGTTTTTGAGTCCAAACTCTGAAGGAAATTCTGTCTCTGCTAAAAAGGTTAAGACTTCAAAACACTC
CACAATAATTGATACTCTTCCTTCAGCAAGAAAAAGACAGCAAATACCCACAATATAATATACAATTCAAT
Protein sequenceShow/hide protein sequence
MPKWENFSETVRYNMGEEGYGWSPIGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHGGGRTHLDPEAQMGFAGKLAHPSPKMTVYS
CGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDISNATTSSHFTENSSSL