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Lsi02G007260 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G007260
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionpolyphenol oxidase, chloroplastic-like
Genome locationchr02:6552482..6560067
RNA-Seq ExpressionLsi02G007260
SyntenyLsi02G007260
Gene Ontology termsGO:0004097 - catechol oxidase activity (molecular function)
InterPro domainsIPR022740 - Polyphenol oxidase, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056962.1 polyphenol oxidase I [Cucumis melo var. makuwa]1.7e-6377.16Show/hide
Query:  GYIYQDVEIPWLDTKKIPSPNPWIRTKESEPPIINFPQIMDSDITTMVDRPEVPRTGEE-DEVLVIEDVEYDPTTRVHFDVLVNVVDEGQNKCAAFLEFV
        GY+YQ+V +PWL   KIPSPNPWIRT+E EPPIINFPQ ++SDITTMVDRPE   +GEE D VLV+EDVEYDPTTRVHFDVLVNVVDE Q++CAAFLEFV
Subjt:  GYIYQDVEIPWLDTKKIPSPNPWIRTKESEPPIINFPQIMDSDITTMVDRPEVPRTGEE-DEVLVIEDVEYDPTTRVHFDVLVNVVDEGQNKCAAFLEFV

Query:  GSFKNISHGLEHHNKTSLLFVITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQLQRV
        GSFKNI HGL HH+KTSL FVITEVI+GL LE DKNLAV+IEP V G+ VT+GGIKIQL+ V
Subjt:  GSFKNISHGLEHHNKTSLLFVITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQLQRV

KAA0056963.1 polyphenol oxidase I [Cucumis melo var. makuwa]2.2e-3957.23Show/hide
Query:  GYIYQDVEIPWLDTKKIPSPNPWIRTKESEPPIINFPQIMDSDITTMVDRPEVPRTGE---EDEVLVIEDVEYDPTTRVHFDVLVNVVDEGQNKCAAFLE
        GY+YQDV IPW DT  I  P    R+  + PP I+FPQI+ SDITTMVDRPEV    E   ++EVLV+EDVEYDPT  +HFDVL+NV DEG++  A  +E
Subjt:  GYIYQDVEIPWLDTKKIPSPNPWIRTKESEPPIINFPQIMDSDITTMVDRPEVPRTGE---EDEVLVIEDVEYDPTTRVHFDVLVNVVDEGQNKCAAFLE

Query:  FVGSFKNISHGLEHHNKTSLLFVITEVIEGLRLEGDKNLAVRIEPEV-CGKSVTIGGIKIQLQRVE
        FVG+F N+ HG   ++KTSL FVIT+ I+ L LEGDK +AV+I P V  G  + IGGIKIQL+ +E
Subjt:  FVGSFKNISHGLEHHNKTSLLFVITEVIEGLRLEGDKNLAVRIEPEV-CGKSVTIGGIKIQLQRVE

XP_004146641.1 polyphenol oxidase, chloroplastic [Cucumis sativus]1.4e-6578.12Show/hide
Query:  GYIYQDVEIPWLDTKKIPSPNPWIRTKESEPPIINFPQIMDSDITTMVDRPEVPRTGEE-DEVLVIEDVEYDPTTRVHFDVLVNVVDEGQNKCAAFLEFV
        GY+YQ+V +PWL   KIP+PNPWIRT+ESEPPI+NFPQI++SDITTMVDRPE  R+GEE DEVLV+EDVEYDPTTRVHFDVLVNVVD+ Q++CAAFLEFV
Subjt:  GYIYQDVEIPWLDTKKIPSPNPWIRTKESEPPIINFPQIMDSDITTMVDRPEVPRTGEE-DEVLVIEDVEYDPTTRVHFDVLVNVVDEGQNKCAAFLEFV

Query:  GSFKNISHGLEHHNKTSLLFVITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQLQ
        GSFKNI HGL HH+KTSL FVITEVI+GL LE DKNLAV+IEP V G+ VT+GGIKIQL+
Subjt:  GSFKNISHGLEHHNKTSLLFVITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQLQ

XP_008446626.1 PREDICTED: polyphenol oxidase I, chloroplastic-like [Cucumis melo]1.7e-6377.16Show/hide
Query:  GYIYQDVEIPWLDTKKIPSPNPWIRTKESEPPIINFPQIMDSDITTMVDRPEVPRTGEE-DEVLVIEDVEYDPTTRVHFDVLVNVVDEGQNKCAAFLEFV
        GY+YQ+V +PWL   KIPSPNPWIRT+E EPPIINFPQ ++SDITTMVDRPE   +GEE D VLV+EDVEYDPTTRVHFDVLVNVVDE Q++CAAFLEFV
Subjt:  GYIYQDVEIPWLDTKKIPSPNPWIRTKESEPPIINFPQIMDSDITTMVDRPEVPRTGEE-DEVLVIEDVEYDPTTRVHFDVLVNVVDEGQNKCAAFLEFV

Query:  GSFKNISHGLEHHNKTSLLFVITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQLQRV
        GSFKNI HGL HH+KTSL FVITEVI+GL LE DKNLAV+IEP V G+ VT+GGIKIQL+ V
Subjt:  GSFKNISHGLEHHNKTSLLFVITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQLQRV

XP_008446638.1 PREDICTED: polyphenol oxidase, chloroplastic-like [Cucumis melo]1.3e-4256.29Show/hide
Query:  GYIYQDVEIPWLDTKKIPSPNPWIRTKES----EPPIINFPQIMDSDITTMVDRPE-VPRTGEEDEVLVIEDVEYDPTTRVHFDVLVNVVDEGQNKCAAF
        GY+YQDVEIPWL+TK++P      RTK S    EPP+INFPQ + S ITT V+RP  V     E+EVLVIED+EYDPT  +HF+VLV+VVDEG + C   
Subjt:  GYIYQDVEIPWLDTKKIPSPNPWIRTKES----EPPIINFPQIMDSDITTMVDRPE-VPRTGEEDEVLVIEDVEYDPTTRVHFDVLVNVVDEGQNKCAAF

Query:  LEFVGSFKNISHGLEHHNKTSLLFVITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQLQRVE
        +EF+GSFKNI HG +H  K+SL FV+TE IE L L   + LAVRI+P++ G  + +GGIKIQ++ +E
Subjt:  LEFVGSFKNISHGLEHHNKTSLLFVITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQLQRVE

TrEMBL top hitse value%identityAlignment
A0A0A0LUI1 Uncharacterized protein6.7e-6678.12Show/hide
Query:  GYIYQDVEIPWLDTKKIPSPNPWIRTKESEPPIINFPQIMDSDITTMVDRPEVPRTGEE-DEVLVIEDVEYDPTTRVHFDVLVNVVDEGQNKCAAFLEFV
        GY+YQ+V +PWL   KIP+PNPWIRT+ESEPPI+NFPQI++SDITTMVDRPE  R+GEE DEVLV+EDVEYDPTTRVHFDVLVNVVD+ Q++CAAFLEFV
Subjt:  GYIYQDVEIPWLDTKKIPSPNPWIRTKESEPPIINFPQIMDSDITTMVDRPEVPRTGEE-DEVLVIEDVEYDPTTRVHFDVLVNVVDEGQNKCAAFLEFV

Query:  GSFKNISHGLEHHNKTSLLFVITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQLQ
        GSFKNI HGL HH+KTSL FVITEVI+GL LE DKNLAV+IEP V G+ VT+GGIKIQL+
Subjt:  GSFKNISHGLEHHNKTSLLFVITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQLQ

A0A1S3BFJ5 polyphenol oxidase I, chloroplastic-like8.2e-6477.16Show/hide
Query:  GYIYQDVEIPWLDTKKIPSPNPWIRTKESEPPIINFPQIMDSDITTMVDRPEVPRTGEE-DEVLVIEDVEYDPTTRVHFDVLVNVVDEGQNKCAAFLEFV
        GY+YQ+V +PWL   KIPSPNPWIRT+E EPPIINFPQ ++SDITTMVDRPE   +GEE D VLV+EDVEYDPTTRVHFDVLVNVVDE Q++CAAFLEFV
Subjt:  GYIYQDVEIPWLDTKKIPSPNPWIRTKESEPPIINFPQIMDSDITTMVDRPEVPRTGEE-DEVLVIEDVEYDPTTRVHFDVLVNVVDEGQNKCAAFLEFV

Query:  GSFKNISHGLEHHNKTSLLFVITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQLQRV
        GSFKNI HGL HH+KTSL FVITEVI+GL LE DKNLAV+IEP V G+ VT+GGIKIQL+ V
Subjt:  GSFKNISHGLEHHNKTSLLFVITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQLQRV

A0A1S3BFK3 polyphenol oxidase, chloroplastic-like6.1e-4356.29Show/hide
Query:  GYIYQDVEIPWLDTKKIPSPNPWIRTKES----EPPIINFPQIMDSDITTMVDRPE-VPRTGEEDEVLVIEDVEYDPTTRVHFDVLVNVVDEGQNKCAAF
        GY+YQDVEIPWL+TK++P      RTK S    EPP+INFPQ + S ITT V+RP  V     E+EVLVIED+EYDPT  +HF+VLV+VVDEG + C   
Subjt:  GYIYQDVEIPWLDTKKIPSPNPWIRTKES----EPPIINFPQIMDSDITTMVDRPE-VPRTGEEDEVLVIEDVEYDPTTRVHFDVLVNVVDEGQNKCAAF

Query:  LEFVGSFKNISHGLEHHNKTSLLFVITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQLQRVE
        +EF+GSFKNI HG +H  K+SL FV+TE IE L L   + LAVRI+P++ G  + +GGIKIQ++ +E
Subjt:  LEFVGSFKNISHGLEHHNKTSLLFVITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQLQRVE

A0A5A7UM88 Polyphenol oxidase I8.2e-6477.16Show/hide
Query:  GYIYQDVEIPWLDTKKIPSPNPWIRTKESEPPIINFPQIMDSDITTMVDRPEVPRTGEE-DEVLVIEDVEYDPTTRVHFDVLVNVVDEGQNKCAAFLEFV
        GY+YQ+V +PWL   KIPSPNPWIRT+E EPPIINFPQ ++SDITTMVDRPE   +GEE D VLV+EDVEYDPTTRVHFDVLVNVVDE Q++CAAFLEFV
Subjt:  GYIYQDVEIPWLDTKKIPSPNPWIRTKESEPPIINFPQIMDSDITTMVDRPEVPRTGEE-DEVLVIEDVEYDPTTRVHFDVLVNVVDEGQNKCAAFLEFV

Query:  GSFKNISHGLEHHNKTSLLFVITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQLQRV
        GSFKNI HGL HH+KTSL FVITEVI+GL LE DKNLAV+IEP V G+ VT+GGIKIQL+ V
Subjt:  GSFKNISHGLEHHNKTSLLFVITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQLQRV

A0A5A7UPD3 Polyphenol oxidase6.1e-4356.29Show/hide
Query:  GYIYQDVEIPWLDTKKIPSPNPWIRTKES----EPPIINFPQIMDSDITTMVDRPE-VPRTGEEDEVLVIEDVEYDPTTRVHFDVLVNVVDEGQNKCAAF
        GY+YQDVEIPWL+TK++P      RTK S    EPP+INFPQ + S ITT V+RP  V     E+EVLVIED+EYDPT  +HF+VLV+VVDEG + C   
Subjt:  GYIYQDVEIPWLDTKKIPSPNPWIRTKES----EPPIINFPQIMDSDITTMVDRPE-VPRTGEEDEVLVIEDVEYDPTTRVHFDVLVNVVDEGQNKCAAF

Query:  LEFVGSFKNISHGLEHHNKTSLLFVITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQLQRVE
        +EF+GSFKNI HG +H  K+SL FV+TE IE L L   + LAVRI+P++ G  + +GGIKIQ++ +E
Subjt:  LEFVGSFKNISHGLEHHNKTSLLFVITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQLQRVE

SwissProt top hitse value%identityAlignment
P43309 Polyphenol oxidase, chloroplastic2.1e-1634.62Show/hide
Query:  GYIYQDVEIPWLDTKKIPSPNPWIRTK------------ESEPPII---NFPQIMDSDITTMVDRPEVPRTG-----EEDEVLVIEDVEYDPTTRVHFDV
        GY+YQDV+IPWL +K  P       +K             S   ++    FP  + S I+T+V RP+  +       +E+E+LVIE +E+D    V FDV
Subjt:  GYIYQDVEIPWLDTKKIPSPNPWIRTK------------ESEPPII---NFPQIMDSDITTMVDRPEVPRTG-----EEDEVLVIEDVEYDPTTRVHFDV

Query:  LVNVVDE---GQNKCAAFLEFVGSFKNISHGLEHHNK--TSLLFVITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQ
         VN VD+   G +K     EF GSF ++ H  +H  K  T L   +T+++E +  E D ++ V + P+    +V IGGIKI+
Subjt:  LVNVVDE---GQNKCAAFLEFVGSFKNISHGLEHHNK--TSLLFVITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQ

Q06215 Polyphenol oxidase A1, chloroplastic1.3e-1834.24Show/hide
Query:  GYIYQDVEIPWLDTKKIP--------------------SPNPWIRTKESEPPIINFPQIMDSDITTMVDRPEVPRT----GEEDEVLVIEDVEYDPTTRV
        GY YQDV IPW   K +P                    SP  ++  ++S    + FP ++++ ++ +V RP+  R+     EE+EVLVIE +E+     +
Subjt:  GYIYQDVEIPWLDTKKIP--------------------SPNPWIRTKESEPPIINFPQIMDSDITTMVDRPEVPRT----GEEDEVLVIEDVEYDPTTRV

Query:  HFDVLVNVVDEGQNKCAAFLEFVGSFKNISHGLE-HHNK---TSLLFVITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKI
         FDV +N  DE     A   EF GSF NI H    H NK   TSL   IT+++E L +EGD N+ V + P+     V I  ++I
Subjt:  HFDVLVNVVDEGQNKCAAFLEFVGSFKNISHGLE-HHNK---TSLLFVITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKI

Q08307 Polyphenol oxidase E, chloroplastic3.5e-1130.77Show/hide
Query:  GYIYQDVEIPWLDTKKI-PSPNPWIRTKESEPPIINFPQI-MDSDITTMVDRPEVPRT----GEEDEVLVIEDVEYDPTTRVHFDVLVNVVDEGQNKCAA
        G+ Y  +  PW + K I  S +  + T    P    FP   +D  I+  + RP   RT     E++E+L    + YD    V FDV +NV          
Subjt:  GYIYQDVEIPWLDTKKI-PSPNPWIRTKESEPPIINFPQI-MDSDITTMVDRPEVPRT----GEEDEVLVIEDVEYDPTTRVHFDVLVNVVDEGQNKCAA

Query:  FLEFVGSFKNIS--HGLEHHNKTSLLF--VITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQLQ
          EF GS+ ++   HG   ++ TSL F   ITE++E + LE +  +AV + P+  G+ V+I  ++I+L+
Subjt:  FLEFVGSFKNIS--HGLEHHNKTSLLF--VITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQLQ

Q6UIL3 (+)-larreatricin hydroxylase, chloroplastic1.3e-2137.64Show/hide
Query:  GYIYQDVEIPWLDTKKIP-SPNPW---IRTKESEPP--IINFPQIMDSDITTMVDRPEVPRT----GEEDEVLVIEDVEYDPTTRVHFDVLVNVVDEGQN
        GY YQ+V+IPW+++K  P   NPW   +R+K +     I  FP  +DS ++  V RP+  R+     +E+EVLVIE ++++P   + FDV +N  DE  +
Subjt:  GYIYQDVEIPWLDTKKIP-SPNPW---IRTKESEPP--IINFPQIMDSDITTMVDRPEVPRT----GEEDEVLVIEDVEYDPTTRVHFDVLVNVVDEGQN

Query:  KCAAFLEFVGSFKNISHGLEHHNK------TSLLFVITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQLQRVE
          A   EF GSF N+ H   H +K      T+L   I+EV++ L ++GD ++ V + P V    +TIGG KI+  R E
Subjt:  KCAAFLEFVGSFKNISHGLEHHNK------TSLLFVITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQLQRVE

Q9FRX6 Aureusidin synthase3.4e-1433.72Show/hide
Query:  GYIYQDVEIPWLDTKKIPSPNPWI-----RTKESEPPIINFPQIMDSDITTMVDRPEVPRTGEE----DEVLVIEDVEYD-PTTRVHFDVLVNVVDEGQN
        GY+YQDVEIPWL+T+  P  +P +     RT  + P  + FP I+D  +  +V RP+  R+ +E    +E+LVIE +E +     V FDV +N  ++   
Subjt:  GYIYQDVEIPWLDTKKIPSPNPWI-----RTKESEPPIINFPQIMDSDITTMVDRPEVPRTGEE----DEVLVIEDVEYD-PTTRVHFDVLVNVVDEGQN

Query:  KCA-AFLEFVGSFKNISHG--LEHHNKTSLLFV-ITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQL
          +    EF GSF ++ H        KT LL + I +++E L  + D  + V + P   G ++ I  +KI+L
Subjt:  KCA-AFLEFVGSFKNISHG--LEHHNKTSLLFV-ITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTGGATATATTTACCAAGACGTGGAGATTCCATGGTTGGACACCAAGAAAATCCCAAGTCCAAATCCGTGGATAAGAACTAAAGAATCTGAGCCTCCAATCAT
CAACTTCCCACAGATTATGGATTCGGATATAACTACAATGGTAGACAGGCCGGAAGTACCAAGGACCGGAGAGGAAGATGAGGTATTAGTGATTGAAGATGTAGAGTATG
ATCCAACTACACGAGTGCATTTTGATGTGCTTGTTAATGTTGTTGATGAGGGGCAGAACAAGTGCGCGGCGTTTCTTGAGTTTGTGGGGAGCTTTAAAAACATCTCGCAC
GGTCTTGAGCATCATAACAAAACCTCTTTGCTCTTTGTGATAACTGAGGTGATTGAAGGGTTGCGTTTGGAGGGTGATAAGAATTTGGCTGTCAGAATTGAACCCGAAGT
TTGTGGAAAAAGTGTCACCATTGGAGGAATCAAGATTCAGCTTCAGCGTGTGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCTGGATATATTTACCAAGACGTGGAGATTCCATGGTTGGACACCAAGAAAATCCCAAGTCCAAATCCGTGGATAAGAACTAAAGAATCTGAGCCTCCAATCAT
CAACTTCCCACAGATTATGGATTCGGATATAACTACAATGGTAGACAGGCCGGAAGTACCAAGGACCGGAGAGGAAGATGAGGTATTAGTGATTGAAGATGTAGAGTATG
ATCCAACTACACGAGTGCATTTTGATGTGCTTGTTAATGTTGTTGATGAGGGGCAGAACAAGTGCGCGGCGTTTCTTGAGTTTGTGGGGAGCTTTAAAAACATCTCGCAC
GGTCTTGAGCATCATAACAAAACCTCTTTGCTCTTTGTGATAACTGAGGTGATTGAAGGGTTGCGTTTGGAGGGTGATAAGAATTTGGCTGTCAGAATTGAACCCGAAGT
TTGTGGAAAAAGTGTCACCATTGGAGGAATCAAGATTCAGCTTCAGCGTGTGGAATAA
Protein sequenceShow/hide protein sequence
MAAGYIYQDVEIPWLDTKKIPSPNPWIRTKESEPPIINFPQIMDSDITTMVDRPEVPRTGEEDEVLVIEDVEYDPTTRVHFDVLVNVVDEGQNKCAAFLEFVGSFKNISH
GLEHHNKTSLLFVITEVIEGLRLEGDKNLAVRIEPEVCGKSVTIGGIKIQLQRVE