; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G007470 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G007470
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionE3 ubiquitin-protein ligase RMA1H1-like
Genome locationchr02:6854087..6854809
RNA-Seq ExpressionLsi02G007470
SyntenyLsi02G007470
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0071712 - ER-associated misfolded protein catabolic process (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0016020 - membrane (cellular component)
GO:0044390 - ubiquitin-like protein conjugating enzyme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site
IPR018957 - Zinc finger, C3HC4 RING-type
IPR045103 - E3 ubiquitin-protein ligase RNF5/RNF185-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019622.1 E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-11082.57Show/hide
Query:  MAFEHYFSHRWRRQVPA-AMRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDA
        MAFEHYFS RWRR VPA +M NSEK K CFDCNICL+FASEPIVTLCGHLYCWPCIYKWLHVQSASL PDEPPQCPVCKADISHTTMVPLYGRGQSA++A
Subjt:  MAFEHYFSHRWRRQVPA-AMRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDA

Query:  EVDARGLLIPPRPSAFGNKALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPN
        EVD RGLLIPPRPSA GNK LA+I SNNASG+Q  YGDLYQNQN NFDMYDSYEEDSSSSLFN+EDNP GSF HPTA MF  TVY R F +SEN+YAHPN
Subjt:  EVDARGLLIPPRPSAFGNKALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPN

Query:  SYGLSGSSSTRLRRQEILAEKSLNRISIFLFCCFVLCLAVF
        SY L+GS S +LR Q    EKSLNRISIFLFCCFVLCLA+F
Subjt:  SYGLSGSSSTRLRRQEILAEKSLNRISIFLFCCFVLCLAVF

XP_008442466.1 PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Cucumis melo]6.4e-12086.67Show/hide
Query:  MAFEHYFSHRWRRQVPAAMRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAE
        MAFEHYFSH WR+Q+PA+M NSEK KPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAE AE
Subjt:  MAFEHYFSHRWRRQVPAAMRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAE

Query:  VDARGLLIPPRPSAFGNKALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNS
         DARG LIPPRPSAFGNKALATIRSNNAS QQFAYGDL QNQNYNFD+YDSYEEDS SSLF+LEDNP GS  HPTAG+  GTVY R + +SEN+Y HPNS
Subjt:  VDARGLLIPPRPSAFGNKALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNS

Query:  YGLSGSSSTRLRRQEILAEKSLNRISIFLFCCFVLCLAVF
        YGLSGS+S RLRRQEI+AEKSLNRIS FLFCCF+LCLAVF
Subjt:  YGLSGSSSTRLRRQEILAEKSLNRISIFLFCCFVLCLAVF

XP_011653163.1 E3 ubiquitin-protein ligase RMA1H1 [Cucumis sativus]1.6e-11885.42Show/hide
Query:  MAFEHYFSHRWRRQVPAAMRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAE
        M FEHYFSH WR+Q+PA+M NSEK KPCFDCNICLDFAS+PIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKA+ISHTTMVPLYGRGQSAE AE
Subjt:  MAFEHYFSHRWRRQVPAAMRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAE

Query:  VDARGLLIPPRPSAFGNKALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNS
        VDARG+LIPPRPSAFGNKALATIRSNNAS QQFAYGDL QNQNYNFD+YDSYEEDS SSLF+LEDNP GS  HPTAGM   TVY RF+ +SEN+Y HPNS
Subjt:  VDARGLLIPPRPSAFGNKALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNS

Query:  YGLSGSSSTRLRRQEILAEKSLNRISIFLFCCFVLCLAVF
        YGLSGS+S RLRRQEI+AEKSLN+I  FLFCCF+LCLAVF
Subjt:  YGLSGSSSTRLRRQEILAEKSLNRISIFLFCCFVLCLAVF

XP_023519102.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita pepo subsp. pepo]3.2e-11182.99Show/hide
Query:  MAFEHYFSHRWRRQVPA-AMRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDA
        MAFEHYFS RWRR VPA +M NSEK K CFDCNICL+FASEPIVTLCGHLYCWPCIYKWLHVQSASL PDEPPQCPVCKADISHTTMVPLYGRGQSA++A
Subjt:  MAFEHYFSHRWRRQVPA-AMRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDA

Query:  EVDARGLLIPPRPSAFGNKALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPN
        EVD RGLLIPPRPSAFGNK LA+I SNNASG+Q  YGDLYQNQN NFDMYDSYEEDSSSSLFN+EDNP GSF HPTA MF  TVY R F +SEN+YAHPN
Subjt:  EVDARGLLIPPRPSAFGNKALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPN

Query:  SYGLSGSSSTRLRRQEILAEKSLNRISIFLFCCFVLCLAVF
        SY L+GS S +LR Q    EKSLNRISIFLFCCFVLCLA+F
Subjt:  SYGLSGSSSTRLRRQEILAEKSLNRISIFLFCCFVLCLAVF

XP_038895713.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida]4.7e-12390.42Show/hide
Query:  MAFEHYFSHRWRRQVPAAMRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAE
        MAFEHYF H WRRQVPAAM NSEK KPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASL PDEPPQCPVCKA+ISHTTMVPLYGRGQSAEDAE
Subjt:  MAFEHYFSHRWRRQVPAAMRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAE

Query:  VDARGLLIPPRPSAFGNKALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNS
        VDARGLLIPPRPSAFGNKALATIRSN ASGQQFAYGDLYQNQ YNFDMYDSYEEDSSSSLFNLED+  GS  HPTAGMF  TVYARFF NSEN+Y HP+S
Subjt:  VDARGLLIPPRPSAFGNKALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNS

Query:  YGLSGSSSTRLRRQEILAEKSLNRISIFLFCCFVLCLAVF
        YG SG+SS RLRRQEILAEKSLNRISIFLFCCFVLCL VF
Subjt:  YGLSGSSSTRLRRQEILAEKSLNRISIFLFCCFVLCLAVF

TrEMBL top hitse value%identityAlignment
A0A0A0LUK5 RING-type domain-containing protein7.6e-11985.42Show/hide
Query:  MAFEHYFSHRWRRQVPAAMRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAE
        M FEHYFSH WR+Q+PA+M NSEK KPCFDCNICLDFAS+PIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKA+ISHTTMVPLYGRGQSAE AE
Subjt:  MAFEHYFSHRWRRQVPAAMRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAE

Query:  VDARGLLIPPRPSAFGNKALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNS
        VDARG+LIPPRPSAFGNKALATIRSNNAS QQFAYGDL QNQNYNFD+YDSYEEDS SSLF+LEDNP GS  HPTAGM   TVY RF+ +SEN+Y HPNS
Subjt:  VDARGLLIPPRPSAFGNKALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNS

Query:  YGLSGSSSTRLRRQEILAEKSLNRISIFLFCCFVLCLAVF
        YGLSGS+S RLRRQEI+AEKSLN+I  FLFCCF+LCLAVF
Subjt:  YGLSGSSSTRLRRQEILAEKSLNRISIFLFCCFVLCLAVF

A0A1S3B6D8 E3 ubiquitin-protein ligase RMA1H1-like3.1e-12086.67Show/hide
Query:  MAFEHYFSHRWRRQVPAAMRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAE
        MAFEHYFSH WR+Q+PA+M NSEK KPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAE AE
Subjt:  MAFEHYFSHRWRRQVPAAMRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAE

Query:  VDARGLLIPPRPSAFGNKALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNS
         DARG LIPPRPSAFGNKALATIRSNNAS QQFAYGDL QNQNYNFD+YDSYEEDS SSLF+LEDNP GS  HPTAG+  GTVY R + +SEN+Y HPNS
Subjt:  VDARGLLIPPRPSAFGNKALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNS

Query:  YGLSGSSSTRLRRQEILAEKSLNRISIFLFCCFVLCLAVF
        YGLSGS+S RLRRQEI+AEKSLNRIS FLFCCF+LCLAVF
Subjt:  YGLSGSSSTRLRRQEILAEKSLNRISIFLFCCFVLCLAVF

A0A5A7UTV8 E3 ubiquitin-protein ligase RMA1H1-like3.1e-12086.67Show/hide
Query:  MAFEHYFSHRWRRQVPAAMRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAE
        MAFEHYFSH WR+Q+PA+M NSEK KPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAE AE
Subjt:  MAFEHYFSHRWRRQVPAAMRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAE

Query:  VDARGLLIPPRPSAFGNKALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNS
         DARG LIPPRPSAFGNKALATIRSNNAS QQFAYGDL QNQNYNFD+YDSYEEDS SSLF+LEDNP GS  HPTAG+  GTVY R + +SEN+Y HPNS
Subjt:  VDARGLLIPPRPSAFGNKALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNS

Query:  YGLSGSSSTRLRRQEILAEKSLNRISIFLFCCFVLCLAVF
        YGLSGS+S RLRRQEI+AEKSLNRIS FLFCCF+LCLAVF
Subjt:  YGLSGSSSTRLRRQEILAEKSLNRISIFLFCCFVLCLAVF

A0A6J1EJS4 E3 ubiquitin-protein ligase RMA1H1-like1.3e-11082.16Show/hide
Query:  MAFEHYFSHRWRRQVPA-AMRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDA
        MAFEHYFS RWRR VPA +M NSEK K CFDCNICL+FASEPIVTLCGHLYCWPCIYKWLH+QSASL PDEPPQCPVCKADISHTTMVPLYGR QSA++A
Subjt:  MAFEHYFSHRWRRQVPA-AMRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDA

Query:  EVDARGLLIPPRPSAFGNKALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPN
        EVD RGLLIPPRPSAFGNK LA+I SNNASG+Q  YGDLYQNQN NFDMYDSYEEDSSSSLFN+EDNP GSF HPTA MF  TVY R F +SEN+YAHPN
Subjt:  EVDARGLLIPPRPSAFGNKALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPN

Query:  SYGLSGSSSTRLRRQEILAEKSLNRISIFLFCCFVLCLAVF
        SY L+GS S +LR Q    EKSLNRISIFLFCCFVLCLA+F
Subjt:  SYGLSGSSSTRLRRQEILAEKSLNRISIFLFCCFVLCLAVF

A0A6J1KJG8 E3 ubiquitin-protein ligase RMA1H1-like7.9e-10881.33Show/hide
Query:  MAFEHYFSHRWRRQVPA-AMRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDA
        MAFEHYFS RWRR VPA +M NSE+ K CFDCNICL+FASEPIVTLCGHLYCWPCIYKWLHVQS SL PDEPPQCPVCKADISHTTMVPLYGRGQSA++A
Subjt:  MAFEHYFSHRWRRQVPA-AMRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDA

Query:  EVDARGLLIPPRPSAFGNKALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPN
        EVD RGLLIPPRPSAFGNK LA+I SNNASG+Q  Y DLYQ QN NFDMYDSYEEDSSSSLFNLEDNP GSF HPTA MF  TVYAR F +SE+++AHPN
Subjt:  EVDARGLLIPPRPSAFGNKALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPN

Query:  SYGLSGSSSTRLRRQEILAEKSLNRISIFLFCCFVLCLAVF
        SY L+GS S +LR Q    EKSLNRISIFLFCCFVLCLA+F
Subjt:  SYGLSGSSSTRLRRQEILAEKSLNRISIFLFCCFVLCLAVF

SwissProt top hitse value%identityAlignment
O64425 E3 ubiquitin-protein ligase RMA14.0e-3238.89Show/hide
Query:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPD--EPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNKALATIRSN
        FDCNICLD   EP+VTLCGHL+CWPCI+KWL VQS S + +     QCPVCK+ +SH+T+VPLYGRG+     E       +P RP       +  +   
Subjt:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPD--EPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNKALATIRSN

Query:  NASGQQFAYGDLYQNQNYNFDM-YDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFF-RNSENMYAHPNSYGLSGSSSTRLRRQEILAEKSLNR
              +A  DL  +Q  +F+   + Y     S + +       +   P   M    V  R F     + +A+P++Y L+G+S  R+RR+ + A+KSL R
Subjt:  NASGQQFAYGDLYQNQNYNFDM-YDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFF-RNSENMYAHPNSYGLSGSSSTRLRRQEILAEKSLNR

Query:  ISIFLFCCFVLCLAVF
        I  F  CC VLCL +F
Subjt:  ISIFLFCCFVLCLAVF

P93030 E3 ubiquitin-protein ligase RMA23.9e-2735Show/hide
Query:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLA-------PDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNKALA
        FDCNICLD   +P+VTLCGHL+CWPCI+KW +  + S           EPP+CPVCK+D+S  T+VP+YGRGQ A  +     G  +P RP+        
Subjt:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLA-------PDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNKALA

Query:  TIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFF-RNSENMYAHPNSYGLSGSSSTRLRRQEILAEK
         +      GQ+   G   ++Q Y + M D                       P  G+    VY R F  +S NM  + +        + R RR+ + AE+
Subjt:  TIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFF-RNSENMYAHPNSYGLSGSSSTRLRRQEILAEK

Query:  SLNRISIFLFCCFVLCLAVF
        SL+R+ +FL C   +CL +F
Subjt:  SLNRISIFLFCCFVLCLAVF

Q6R567 E3 ubiquitin-protein ligase RMA1H17.3e-4247.14Show/hide
Query:  EKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASL--APDEPPQCPVCKADISHTTMVPLYGR-GQSAEDAEVDARGLLI-----PPRPSA
        E I   FDCNICLD   EP++TLCGHLYCWPCIYKW++ QS S   +  + PQCPVCKA++S  T++PLYGR GQS + +E  A  L I     PP P  
Subjt:  EKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASL--APDEPPQCPVCKADISHTTMVPLYGR-GQSAEDAEVDARGLLI-----PPRPSA

Query:  FGNKALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSE-NMYAHPNSYGLSGSSSTRLRR
         G+  L T  SN +   Q   G   Q+Q        SY    SS + +     A   +H   G  A   YAR F NS   MY +PNSY L+ SSS R+RR
Subjt:  FGNKALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSE-NMYAHPNSYGLSGSSSTRLRR

Query:  QEILAEKSLNRISIFLFCCFVLCLAVF
        Q   A++SL RI  FLFCCFV CL +F
Subjt:  QEILAEKSLNRISIFLFCCFVLCLAVF

Q8GUK7 E3 ubiquitin-protein ligase RMA31.6e-3642.08Show/hide
Query:  CFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDE-PPQCPVCKADISHTTMVPLYGRGQSAEDA-----EVDARGLLIP--PRPSAFGNKA
        CFDCNICLD A +P+VTLCGHL+CWPCIYKWLHVQ +S++ D+    CPVCK++I+ T++VPLYGRG S+  +     + DA    IP  P PSA  N  
Subjt:  CFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDE-PPQCPVCKADISHTTMVPLYGRGQSAEDA-----EVDARGLLIP--PRPSAFGNKA

Query:  LATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILAE
        + +  S N S Q       + N  Y+   + + E    ++   +      SF +P  GMF   VY R F    N  A P         S R+ ++    E
Subjt:  LATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILAE

Query:  KSLNRISIFLFCCFVLCLAVF
        KSLNR+SIF  CC +LCL +F
Subjt:  KSLNRISIFLFCCFVLCLAVF

Q99942 E3 ubiquitin-protein ligase RNF54.3e-1850.59Show/hide
Query:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRG-QSAEDAEVDARGLLIPPRP
        F+CNICL+ A E +V++CGHLYCWPC+++WL  +       E  +CPVCKA IS   +VPLYGRG Q  +D       L  PPRP
Subjt:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRG-QSAEDAEVDARGLLIPPRP

Arabidopsis top hitse value%identityAlignment
AT1G19310.1 RING/U-box superfamily protein1.4e-2458.14Show/hide
Query:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDA-RGLLIPPRPS
        F+CNICLD A +PIVTLCGHL+CWPC+YKWLH+ S S        CPVCKA I    +VPLYGRG+S+ D    +  GL +P RPS
Subjt:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDA-RGLLIPPRPS

AT4G03510.1 RING membrane-anchor 12.8e-3338.89Show/hide
Query:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPD--EPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNKALATIRSN
        FDCNICLD   EP+VTLCGHL+CWPCI+KWL VQS S + +     QCPVCK+ +SH+T+VPLYGRG+     E       +P RP       +  +   
Subjt:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPD--EPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNKALATIRSN

Query:  NASGQQFAYGDLYQNQNYNFDM-YDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFF-RNSENMYAHPNSYGLSGSSSTRLRRQEILAEKSLNR
              +A  DL  +Q  +F+   + Y     S + +       +   P   M    V  R F     + +A+P++Y L+G+S  R+RR+ + A+KSL R
Subjt:  NASGQQFAYGDLYQNQNYNFDM-YDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFF-RNSENMYAHPNSYGLSGSSSTRLRRQEILAEKSLNR

Query:  ISIFLFCCFVLCLAVF
        I  F  CC VLCL +F
Subjt:  ISIFLFCCFVLCLAVF

AT4G03510.2 RING membrane-anchor 12.8e-3338.89Show/hide
Query:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPD--EPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNKALATIRSN
        FDCNICLD   EP+VTLCGHL+CWPCI+KWL VQS S + +     QCPVCK+ +SH+T+VPLYGRG+     E       +P RP       +  +   
Subjt:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPD--EPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNKALATIRSN

Query:  NASGQQFAYGDLYQNQNYNFDM-YDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFF-RNSENMYAHPNSYGLSGSSSTRLRRQEILAEKSLNR
              +A  DL  +Q  +F+   + Y     S + +       +   P   M    V  R F     + +A+P++Y L+G+S  R+RR+ + A+KSL R
Subjt:  NASGQQFAYGDLYQNQNYNFDM-YDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFF-RNSENMYAHPNSYGLSGSSSTRLRRQEILAEKSLNR

Query:  ISIFLFCCFVLCLAVF
        I  F  CC VLCL +F
Subjt:  ISIFLFCCFVLCLAVF

AT4G27470.1 RING membrane-anchor 31.1e-3742.08Show/hide
Query:  CFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDE-PPQCPVCKADISHTTMVPLYGRGQSAEDA-----EVDARGLLIP--PRPSAFGNKA
        CFDCNICLD A +P+VTLCGHL+CWPCIYKWLHVQ +S++ D+    CPVCK++I+ T++VPLYGRG S+  +     + DA    IP  P PSA  N  
Subjt:  CFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDE-PPQCPVCKADISHTTMVPLYGRGQSAEDA-----EVDARGLLIP--PRPSAFGNKA

Query:  LATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILAE
        + +  S N S Q       + N  Y+   + + E    ++   +      SF +P  GMF   VY R F    N  A P         S R+ ++    E
Subjt:  LATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILAE

Query:  KSLNRISIFLFCCFVLCLAVF
        KSLNR+SIF  CC +LCL +F
Subjt:  KSLNRISIFLFCCFVLCLAVF

AT4G28270.1 RING membrane-anchor 22.7e-2835Show/hide
Query:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLA-------PDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNKALA
        FDCNICLD   +P+VTLCGHL+CWPCI+KW +  + S           EPP+CPVCK+D+S  T+VP+YGRGQ A  +     G  +P RP+        
Subjt:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLA-------PDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNKALA

Query:  TIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFF-RNSENMYAHPNSYGLSGSSSTRLRRQEILAEK
         +      GQ+   G   ++Q Y + M D                       P  G+    VY R F  +S NM  + +        + R RR+ + AE+
Subjt:  TIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFF-RNSENMYAHPNSYGLSGSSSTRLRRQEILAEK

Query:  SLNRISIFLFCCFVLCLAVF
        SL+R+ +FL C   +CL +F
Subjt:  SLNRISIFLFCCFVLCLAVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTTGAGCACTACTTTTCCCATAGATGGAGGAGGCAGGTTCCAGCTGCAATGAGAAACTCTGAGAAGATTAAGCCTTGCTTTGACTGCAACATTTGCTTAGACTT
TGCATCTGAGCCTATAGTTACCCTCTGTGGCCACCTCTATTGCTGGCCTTGCATTTACAAGTGGCTTCATGTCCAGAGTGCCTCCCTCGCCCCCGATGAGCCTCCGCAAT
GTCCAGTTTGCAAGGCCGATATTTCCCACACGACAATGGTCCCTCTCTATGGCCGTGGCCAATCGGCTGAAGATGCTGAGGTTGATGCCAGAGGGCTGCTCATACCTCCT
AGACCATCAGCCTTCGGCAACAAGGCTCTGGCAACTATCAGATCTAATAATGCTTCTGGCCAGCAGTTTGCTTATGGAGACCTATATCAAAACCAAAACTACAATTTTGA
TATGTATGACAGTTATGAAGAGGACTCCAGCAGCTCGTTGTTTAACCTTGAAGACAACCCGGCTGGTAGTTTTCGTCATCCTACGGCCGGGATGTTTGCGGGGACAGTGT
ATGCTAGGTTCTTTAGGAATTCAGAGAACATGTACGCACACCCAAATTCTTATGGTCTAAGTGGGAGTAGCAGTACTCGGTTGAGAAGGCAGGAAATACTGGCCGAGAAG
TCGCTTAATAGGATATCAATTTTTCTCTTCTGTTGCTTCGTTTTGTGCCTTGCTGTATTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCTTTGAGCACTACTTTTCCCATAGATGGAGGAGGCAGGTTCCAGCTGCAATGAGAAACTCTGAGAAGATTAAGCCTTGCTTTGACTGCAACATTTGCTTAGACTT
TGCATCTGAGCCTATAGTTACCCTCTGTGGCCACCTCTATTGCTGGCCTTGCATTTACAAGTGGCTTCATGTCCAGAGTGCCTCCCTCGCCCCCGATGAGCCTCCGCAAT
GTCCAGTTTGCAAGGCCGATATTTCCCACACGACAATGGTCCCTCTCTATGGCCGTGGCCAATCGGCTGAAGATGCTGAGGTTGATGCCAGAGGGCTGCTCATACCTCCT
AGACCATCAGCCTTCGGCAACAAGGCTCTGGCAACTATCAGATCTAATAATGCTTCTGGCCAGCAGTTTGCTTATGGAGACCTATATCAAAACCAAAACTACAATTTTGA
TATGTATGACAGTTATGAAGAGGACTCCAGCAGCTCGTTGTTTAACCTTGAAGACAACCCGGCTGGTAGTTTTCGTCATCCTACGGCCGGGATGTTTGCGGGGACAGTGT
ATGCTAGGTTCTTTAGGAATTCAGAGAACATGTACGCACACCCAAATTCTTATGGTCTAAGTGGGAGTAGCAGTACTCGGTTGAGAAGGCAGGAAATACTGGCCGAGAAG
TCGCTTAATAGGATATCAATTTTTCTCTTCTGTTGCTTCGTTTTGTGCCTTGCTGTATTCTAG
Protein sequenceShow/hide protein sequence
MAFEHYFSHRWRRQVPAAMRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPP
RPSAFGNKALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILAEK
SLNRISIFLFCCFVLCLAVF