; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G007650 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G007650
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptiondof zinc finger protein DOF2.2-like
Genome locationchr02:7051145..7051654
RNA-Seq ExpressionLsi02G007650
SyntenyLsi02G007650
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003851 - Zinc finger, Dof-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583987.1 Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]3.2e-3353.59Show/hide
Query:  MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSDTTLTPLPPVAGGLPLDHL
        MQGA+     +    + +  CPRC+SSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRK KRPKT P SS +  T   P +  L LD  
Subjt:  MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSDTTLTPLPPVAGGLPLDHL

Query:  ATSSYSSAAFMTSL-------DVGAYSFGGLPWTTPITNTIIHSSSSSGNNQSSSL-LQNSSSTLLQ-----DHLPPFAHP
           SYS A + ++L       DVGAY+     WTT I N+I  +S S+GN ++ SL  +N    L+Q     DHLP +A P
Subjt:  ATSSYSSAAFMTSL-------DVGAYSFGGLPWTTPITNTIIHSSSSSGNNQSSSL-LQNSSSTLLQ-----DHLPPFAHP

XP_008442727.1 PREDICTED: dof zinc finger protein DOF2.2-like [Cucumis melo]2.6e-5976.37Show/hide
Query:  MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTT--PSSSD-----TTLTPLPPVAG
        MQGA NEDQTKASTIIQKQKCPRC+SSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPK+T  PSSS      TTLTP PPV  
Subjt:  MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTT--PSSSD-----TTLTPLPPVAG

Query:  GLPLDHLATSSY-SSAAFMTSLDVGA--YSFGGLPW-TTPITNTII--HSSSSSGNNQSSSL-LQNSSSTLLQDHLPPFAHP
        G PLD    SSY SSAAF+ SLDVGA   SFGGL W TTPI NTII  + SSSSGNNQ+SS  + N+SS LL +HL PF HP
Subjt:  GLPLDHLATSSY-SSAAFMTSLDVGA--YSFGGLPW-TTPITNTII--HSSSSSGNNQSSSL-LQNSSSTLLQDHLPPFAHP

XP_011653263.1 dof zinc finger protein 4 [Cucumis sativus]2.4e-6077.47Show/hide
Query:  MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTT-----PSSSDTTLTPLPPVAGGL
        MQGA NEDQTKASTIIQKQKCPRC+SSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPK+T      SSSDTT T  PP  GG 
Subjt:  MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTT-----PSSSDTTLTPLPPVAGGL

Query:  -PLDHLATSSY-SSAAFMTSLDVGA--YSFGGLPWT--TPITNTII--HSSSSSGNNQSSSL-LQNSSSTLLQDHLPPFAHP
         PLD LATSSY SSAAF++SLDVGA   SFGGL WT  TPI NTII  + SSSSGNNQ+SS  ++NSSSTL+ +HL PF HP
Subjt:  -PLDHLATSSY-SSAAFMTSLDVGA--YSFGGLPWT--TPITNTII--HSSSSSGNNQSSSL-LQNSSSTLLQDHLPPFAHP

XP_022927122.1 dof zinc finger protein DOF5.3-like [Cucurbita moschata]5.5e-3351.91Show/hide
Query:  MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSDT--TLTPLPPVA--GGLP
        MQGA+     +    + +  CPRC+SSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRK KRPK  P SS +  TL   P +A   G P
Subjt:  MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSDT--TLTPLPPVA--GGLP

Query:  LDHL-----ATSSYSSAAFMTSLDVGAYSFGGLPWTTPITNTIIHSSSSSGNNQSSSL-LQNSSSTLLQ-----DHLPPFAHP
        L +      +T + SS A    +DVGAY+     WTT        +S S+GN ++ SL  +N    L+Q     DHLPP+A P
Subjt:  LDHL-----ATSSYSSAAFMTSLDVGAYSFGGLPWTTPITNTIIHSSSSSGNNQSSSL-LQNSSSTLLQ-----DHLPPFAHP

XP_038876987.1 dof zinc finger protein 4-like [Benincasa hispida]2.3e-6880.46Show/hide
Query:  MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTP-----SSSDTTLTPLPPVAGGL
        MQGA NEDQ K  TIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGG SRKSKRPKT P     SSSDTTLTP PP A G 
Subjt:  MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTP-----SSSDTTLTPLPPVAGGL

Query:  PLDHLATSSYSSAAFMTSLDVGAYSFGGLPWTTPITNTIIHSSSSSGNNQSSSLLQNSSSTLLQDHLPPFAHPP
        PLD  A SSYSSAAF+ SLDVGAYSFGGLPWTTPITNTIIHSSSS  N  SS  ++N+S   L +HLPPFAHPP
Subjt:  PLDHLATSSYSSAAFMTSLDVGAYSFGGLPWTTPITNTIIHSSSSSGNNQSSSLLQNSSSTLLQDHLPPFAHPP

TrEMBL top hitse value%identityAlignment
A0A0A0LXF4 Dof-type domain-containing protein1.1e-6077.47Show/hide
Query:  MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTT-----PSSSDTTLTPLPPVAGGL
        MQGA NEDQTKASTIIQKQKCPRC+SSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPK+T      SSSDTT T  PP  GG 
Subjt:  MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTT-----PSSSDTTLTPLPPVAGGL

Query:  -PLDHLATSSY-SSAAFMTSLDVGA--YSFGGLPWT--TPITNTII--HSSSSSGNNQSSSL-LQNSSSTLLQDHLPPFAHP
         PLD LATSSY SSAAF++SLDVGA   SFGGL WT  TPI NTII  + SSSSGNNQ+SS  ++NSSSTL+ +HL PF HP
Subjt:  -PLDHLATSSY-SSAAFMTSLDVGA--YSFGGLPWT--TPITNTII--HSSSSSGNNQSSSL-LQNSSSTLLQDHLPPFAHP

A0A1S3B6E2 dof zinc finger protein DOF2.2-like1.3e-5976.37Show/hide
Query:  MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTT--PSSSD-----TTLTPLPPVAG
        MQGA NEDQTKASTIIQKQKCPRC+SSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPK+T  PSSS      TTLTP PPV  
Subjt:  MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTT--PSSSD-----TTLTPLPPVAG

Query:  GLPLDHLATSSY-SSAAFMTSLDVGA--YSFGGLPW-TTPITNTII--HSSSSSGNNQSSSL-LQNSSSTLLQDHLPPFAHP
        G PLD    SSY SSAAF+ SLDVGA   SFGGL W TTPI NTII  + SSSSGNNQ+SS  + N+SS LL +HL PF HP
Subjt:  GLPLDHLATSSY-SSAAFMTSLDVGA--YSFGGLPW-TTPITNTII--HSSSSSGNNQSSSL-LQNSSSTLLQDHLPPFAHP

A0A5A7UU19 Dof zinc finger protein DOF2.2-like1.3e-5976.37Show/hide
Query:  MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTT--PSSSD-----TTLTPLPPVAG
        MQGA NEDQTKASTIIQKQKCPRC+SSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPK+T  PSSS      TTLTP PPV  
Subjt:  MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTT--PSSSD-----TTLTPLPPVAG

Query:  GLPLDHLATSSY-SSAAFMTSLDVGA--YSFGGLPW-TTPITNTII--HSSSSSGNNQSSSL-LQNSSSTLLQDHLPPFAHP
        G PLD    SSY SSAAF+ SLDVGA   SFGGL W TTPI NTII  + SSSSGNNQ+SS  + N+SS LL +HL PF HP
Subjt:  GLPLDHLATSSY-SSAAFMTSLDVGA--YSFGGLPW-TTPITNTII--HSSSSSGNNQSSSL-LQNSSSTLLQDHLPPFAHP

A0A6J1EG92 dof zinc finger protein DOF5.3-like2.6e-3351.91Show/hide
Query:  MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSDT--TLTPLPPVA--GGLP
        MQGA+     +    + +  CPRC+SSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRK KRPK  P SS +  TL   P +A   G P
Subjt:  MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSDT--TLTPLPPVA--GGLP

Query:  LDHL-----ATSSYSSAAFMTSLDVGAYSFGGLPWTTPITNTIIHSSSSSGNNQSSSL-LQNSSSTLLQ-----DHLPPFAHP
        L +      +T + SS A    +DVGAY+     WTT        +S S+GN ++ SL  +N    L+Q     DHLPP+A P
Subjt:  LDHL-----ATSSYSSAAFMTSLDVGAYSFGGLPWTTPITNTIIHSSSSSGNNQSSSL-LQNSSSTLLQ-----DHLPPFAHP

A0A6J1KNK3 dof zinc finger protein DOF5.3-like1.6e-3056.44Show/hide
Query:  MQG--ASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSDT--TLTPLPPVA--GG
        MQG  A++ ++TK ST+IQ   CPRC+SSNTKFC+YNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRK KRPKT P SS +  TL   P +A   G
Subjt:  MQG--ASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSDT--TLTPLPPVA--GG

Query:  LPLDHLATSSYS-----SAAFMTSLDVGAYSFG----------GLPWTTPITNTIIHSSSSSG
         PL +     +S     S A    +DVGAY+FG             WTT I N+I  +S S+G
Subjt:  LPLDHLATSSYS-----SAAFMTSLDVGAYSFG----------GLPWTTPITNTIIHSSSSSG

SwissProt top hitse value%identityAlignment
O24463 Dof zinc finger protein PBF5.1e-2671.43Show/hide
Query:  KCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKT------TPSSSDTTLTPLPP
        KCPRC+S+NTKFCYYNNYS+SQPRYFCK+CRRYWTHGGTLRNVPIGGG RK+K          T SSS  T  PL P
Subjt:  KCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKT------TPSSSDTTLTPLPP

Q8LE43 Dof zinc finger protein DOF2.12.2e-2474.24Show/hide
Query:  QKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSD
        + Q CPRCES NTKFCYYNNYSLSQPRYFCKSCRRYWT GGTLRNVP+GGG R++KR  ++  S +
Subjt:  QKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSD

Q9FM03 Dof zinc finger protein DOF5.62.6e-2549.24Show/hide
Query:  QKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSDTTLTPLPPVAGGLPLDHLATSSYSSAAFMTSLDVGA
        QKCPRCES++TKFCYYNNYSLSQPRYFCK+CRRYWT GGTLRN+P+GGG RK+K+P ++ SSS T+    P          L   ++S   +  S  +G 
Subjt:  QKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSDTTLTPLPPVAGGLPLDHLATSSYSSAAFMTSLDVGA

Query:  YSFGGL--PWTTPITNTIIHSSSSSGNNQSSS
          FGG+   ++TP    +    S  G   S S
Subjt:  YSFGGL--PWTTPITNTIIHSSSSSGNNQSSS

Q9LSL6 Dof zinc finger protein DOF5.72.2e-2463.64Show/hide
Query:  MQGASNEDQTKASTIIQKQ---KCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSDTTL
        + G S   +  +S++ Q Q   KCPRC S NTKFCYYNNYSLSQPR+FCKSCRRYWT GG LRNVPIGGG RK+K+    P+SS  TL
Subjt:  MQGASNEDQTKASTIIQKQ---KCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSDTTL

Q9SVC5 Dof zinc finger protein DOF3.51.3e-2472.6Show/hide
Query:  CPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSDTTLTPLPPVAG
        CPRC SSNTKFCYYNNYSL+QPRYFCK CRRYWT GG+LRNVP+GGG RKS+RPK+  SS + T T L   +G
Subjt:  CPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSDTTLTPLPPVAG

Arabidopsis top hitse value%identityAlignment
AT2G28510.1 Dof-type zinc finger DNA-binding family protein1.5e-2574.24Show/hide
Query:  QKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSD
        + Q CPRCES NTKFCYYNNYSLSQPRYFCKSCRRYWT GGTLRNVP+GGG R++KR  ++  S +
Subjt:  QKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSD

AT3G52440.1 Dof-type zinc finger DNA-binding family protein9.0e-2672.6Show/hide
Query:  CPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSDTTLTPLPPVAG
        CPRC SSNTKFCYYNNYSL+QPRYFCK CRRYWT GG+LRNVP+GGG RKS+RPK+  SS + T T L   +G
Subjt:  CPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSDTTLTPLPPVAG

AT5G60200.1 TARGET OF MONOPTEROS 62.0e-2559.09Show/hide
Query:  KCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSDTTLTPLPPVAGGLPLDHLATSSYSS
        +CPRC+S+NTKFCYYNNYSL+QPRYFCKSCRRYWT GGTLRN+P+GGG RK+KR  T+ ++     TP P    G        + YS+
Subjt:  KCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSDTTLTPLPPVAGGLPLDHLATSSYSS

AT5G62940.1 Dof-type zinc finger DNA-binding family protein1.8e-2649.24Show/hide
Query:  QKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSDTTLTPLPPVAGGLPLDHLATSSYSSAAFMTSLDVGA
        QKCPRCES++TKFCYYNNYSLSQPRYFCK+CRRYWT GGTLRN+P+GGG RK+K+P ++ SSS T+    P          L   ++S   +  S  +G 
Subjt:  QKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSDTTLTPLPPVAGGLPLDHLATSSYSSAAFMTSLDVGA

Query:  YSFGGL--PWTTPITNTIIHSSSSSGNNQSSS
          FGG+   ++TP    +    S  G   S S
Subjt:  YSFGGL--PWTTPITNTIIHSSSSSGNNQSSS

AT5G65590.1 Dof-type zinc finger DNA-binding family protein1.5e-2563.64Show/hide
Query:  MQGASNEDQTKASTIIQKQ---KCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSDTTL
        + G S   +  +S++ Q Q   KCPRC S NTKFCYYNNYSLSQPR+FCKSCRRYWT GG LRNVPIGGG RK+K+    P+SS  TL
Subjt:  MQGASNEDQTKASTIIQKQ---KCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSDTTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGGGGCTTCAAATGAAGATCAAACAAAAGCTTCAACAATAATCCAAAAACAAAAGTGCCCTCGTTGTGAGTCTTCCAACACCAAGTTTTGTTATTACAATAACTA
CAGCCTTTCACAGCCTCGTTACTTTTGTAAGTCTTGTCGAAGGTATTGGACTCATGGTGGCACTCTCCGTAACGTTCCCATCGGCGGCGGCTCGAGAAAATCCAAACGCC
CTAAGACAACGCCTTCTTCTTCCGACACGACCCTAACTCCGCTACCGCCCGTTGCTGGAGGATTGCCTCTTGATCATCTTGCAACTTCTTCTTATTCTAGTGCTGCCTTT
ATGACGTCCTTGGATGTGGGGGCTTATTCATTTGGAGGATTACCTTGGACTACTCCCATCACCAACACAATTATTCATTCTTCTTCTTCTTCAGGTAATAACCAGAGTTC
TAGCCTTCTTCAAAATAGTTCTTCTACTTTGCTTCAAGATCATCTCCCTCCCTTTGCCCATCCTCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGGGGCTTCAAATGAAGATCAAACAAAAGCTTCAACAATAATCCAAAAACAAAAGTGCCCTCGTTGTGAGTCTTCCAACACCAAGTTTTGTTATTACAATAACTA
CAGCCTTTCACAGCCTCGTTACTTTTGTAAGTCTTGTCGAAGGTATTGGACTCATGGTGGCACTCTCCGTAACGTTCCCATCGGCGGCGGCTCGAGAAAATCCAAACGCC
CTAAGACAACGCCTTCTTCTTCCGACACGACCCTAACTCCGCTACCGCCCGTTGCTGGAGGATTGCCTCTTGATCATCTTGCAACTTCTTCTTATTCTAGTGCTGCCTTT
ATGACGTCCTTGGATGTGGGGGCTTATTCATTTGGAGGATTACCTTGGACTACTCCCATCACCAACACAATTATTCATTCTTCTTCTTCTTCAGGTAATAACCAGAGTTC
TAGCCTTCTTCAAAATAGTTCTTCTACTTTGCTTCAAGATCATCTCCCTCCCTTTGCCCATCCTCCCTGA
Protein sequenceShow/hide protein sequence
MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSDTTLTPLPPVAGGLPLDHLATSSYSSAAF
MTSLDVGAYSFGGLPWTTPITNTIIHSSSSSGNNQSSSLLQNSSSTLLQDHLPPFAHPP