; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G007720 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G007720
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:7098263..7098688
RNA-Seq ExpressionLsi02G007720
SyntenyLsi02G007720
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057006.1 hypothetical protein E6C27_scaffold96G001880 [Cucumis melo var. makuwa]4.4e-3663.77Show/hide
Query:  MGILTKKPNLSS-TTNNWVNSLSFSGYLNSKDREQPNSGPIKTLEKKIQPVDYGVKF-GPTHRGSSVGDGKILGLSGANRSSPYIMRNNSIRRGSQKIRD
        MGI TKKP++SS TT+ WVNSLSFSGYLNSKDRE+P+ G I+T ++KI+ V++G +F GPT RGSSV D   +G     RSSPYI+RNNSIRRGS+KIR+
Subjt:  MGILTKKPNLSS-TTNNWVNSLSFSGYLNSKDREQPNSGPIKTLEKKIQPVDYGVKF-GPTHRGSSVGDGKILGLSGANRSSPYIMRNNSIRRGSQKIRD

Query:  DENKSSCSGWSIFRSFVSPCRECRASKPNAIQPRPIQG
        ++ +S    W +  SFV PCRECRASKPN +QPRPIQG
Subjt:  DENKSSCSGWSIFRSFVSPCRECRASKPNAIQPRPIQG

KAG6573282.1 hypothetical protein SDJN03_27169, partial [Cucurbita argyrosperma subsp. sororia]3.0e-1639.55Show/hide
Query:  PNLSSTTNNWVNSLSFSGYLNSKDREQPNSGPIKTLEKKIQPVDYGVKFGPTHRGSSV------GDGKILGLSGANRSSPYIMRNNSIRRGSQKIRDDEN
        P++SS++++   SLSFSG++ SKDR+     P K +    Q  ++G      + G S+       +   +           ++RN+SIRRG ++IR++E 
Subjt:  PNLSSTTNNWVNSLSFSGYLNSKDREQPNSGPIKTLEKKIQPVDYGVKFGPTHRGSSV------GDGKILGLSGANRSSPYIMRNNSIRRGSQKIRDDEN

Query:  KSSCSGWSIFRSFVSPCRECRASKPNAIQPRPIQ
        +S+ SGWS+FRSFVSPCRECRASKP  ++ RP+Q
Subjt:  KSSCSGWSIFRSFVSPCRECRASKPNAIQPRPIQ

KGN64696.1 hypothetical protein Csa_013090 [Cucumis sativus]5.4e-3458.52Show/hide
Query:  MGILTKKPNLSSTTNNWVNSLSFSGYLNSKDREQPNSGPIKTLEKKIQPVDYGVKFGPTHRGSSVGDGKILGLSGANRSSPYIMRNNSIRRGSQKIRDDE
        M I  KKP++SSTT+ W+NSLSFSGYLNSKDR+ P+ G I+T ++KI+ VD+G +F PT  GSSV D          RSS YI+RNNSI+RGS+KI +++
Subjt:  MGILTKKPNLSSTTNNWVNSLSFSGYLNSKDREQPNSGPIKTLEKKIQPVDYGVKFGPTHRGSSVGDGKILGLSGANRSSPYIMRNNSIRRGSQKIRDDE

Query:  NKSSCSGWSIFRSFVSPCRECRASKPNAIQPRPIQ
        ++S  SGW IF  FV PCRECRA KP+ +QPRPIQ
Subjt:  NKSSCSGWSIFRSFVSPCRECRASKPNAIQPRPIQ

XP_022139818.1 uncharacterized protein LOC111010640 [Momordica charantia]6.6e-1645.39Show/hide
Query:  MGILTKKP------NLSSTTNNWVNSLSFSGYLNSKDREQPNSGPIKTLEKKIQPVDYGVKFGP----THRGSSVGDGKILGLSGANRSSPYIMRNNSIR
        MGI  K P      +  S++ ++ +SLSF+ YL  KDRE PNSG +      I+  D G +FGP     H G S G G+   +   +     ++RNNSIR
Subjt:  MGILTKKP------NLSSTTNNWVNSLSFSGYLNSKDREQPNSGPIKTLEKKIQPVDYGVKFGP----THRGSSVGDGKILGLSGANRSSPYIMRNNSIR

Query:  RGSQKIRDDENKSSCS-GW-SIFRSFVSPCRECRASKPNAI---QPRPIQGG
        RG ++I+D+E +SS S  W S+FRSFVSPCRECRASKP+A+   Q  PIQ G
Subjt:  RGSQKIRDDENKSSCS-GW-SIFRSFVSPCRECRASKPNAI---QPRPIQGG

TrEMBL top hitse value%identityAlignment
A0A0A0LXF9 Uncharacterized protein2.6e-3458.52Show/hide
Query:  MGILTKKPNLSSTTNNWVNSLSFSGYLNSKDREQPNSGPIKTLEKKIQPVDYGVKFGPTHRGSSVGDGKILGLSGANRSSPYIMRNNSIRRGSQKIRDDE
        M I  KKP++SSTT+ W+NSLSFSGYLNSKDR+ P+ G I+T ++KI+ VD+G +F PT  GSSV D          RSS YI+RNNSI+RGS+KI +++
Subjt:  MGILTKKPNLSSTTNNWVNSLSFSGYLNSKDREQPNSGPIKTLEKKIQPVDYGVKFGPTHRGSSVGDGKILGLSGANRSSPYIMRNNSIRRGSQKIRDDE

Query:  NKSSCSGWSIFRSFVSPCRECRASKPNAIQPRPIQ
        ++S  SGW IF  FV PCRECRA KP+ +QPRPIQ
Subjt:  NKSSCSGWSIFRSFVSPCRECRASKPNAIQPRPIQ

A0A5D3DS79 Uncharacterized protein2.1e-3663.77Show/hide
Query:  MGILTKKPNLSS-TTNNWVNSLSFSGYLNSKDREQPNSGPIKTLEKKIQPVDYGVKF-GPTHRGSSVGDGKILGLSGANRSSPYIMRNNSIRRGSQKIRD
        MGI TKKP++SS TT+ WVNSLSFSGYLNSKDRE+P+ G I+T ++KI+ V++G +F GPT RGSSV D   +G     RSSPYI+RNNSIRRGS+KIR+
Subjt:  MGILTKKPNLSS-TTNNWVNSLSFSGYLNSKDREQPNSGPIKTLEKKIQPVDYGVKF-GPTHRGSSVGDGKILGLSGANRSSPYIMRNNSIRRGSQKIRD

Query:  DENKSSCSGWSIFRSFVSPCRECRASKPNAIQPRPIQG
        ++ +S    W +  SFV PCRECRASKPN +QPRPIQG
Subjt:  DENKSSCSGWSIFRSFVSPCRECRASKPNAIQPRPIQG

A0A6J1CGL7 uncharacterized protein LOC1110106403.2e-1645.39Show/hide
Query:  MGILTKKP------NLSSTTNNWVNSLSFSGYLNSKDREQPNSGPIKTLEKKIQPVDYGVKFGP----THRGSSVGDGKILGLSGANRSSPYIMRNNSIR
        MGI  K P      +  S++ ++ +SLSF+ YL  KDRE PNSG +      I+  D G +FGP     H G S G G+   +   +     ++RNNSIR
Subjt:  MGILTKKP------NLSSTTNNWVNSLSFSGYLNSKDREQPNSGPIKTLEKKIQPVDYGVKFGP----THRGSSVGDGKILGLSGANRSSPYIMRNNSIR

Query:  RGSQKIRDDENKSSCS-GW-SIFRSFVSPCRECRASKPNAI---QPRPIQGG
        RG ++I+D+E +SS S  W S+FRSFVSPCRECRASKP+A+   Q  PIQ G
Subjt:  RGSQKIRDDENKSSCS-GW-SIFRSFVSPCRECRASKPNAI---QPRPIQGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCCTCACAAAGAAGCCTAATTTGAGTAGCACCACAAATAATTGGGTTAACTCTCTTTCCTTTTCTGGCTATTTGAACTCCAAAGACCGGGAACAACCCAATTC
GGGTCCGATTAAAACTTTGGAGAAGAAGATCCAACCGGTCGACTATGGAGTCAAGTTCGGTCCGACGCATCGAGGTTCAAGTGTGGGCGATGGCAAGATTTTAGGCTTAT
CTGGAGCAAATAGATCATCACCATACATTATGAGAAACAACAGTATTAGAAGGGGAAGTCAAAAGATAAGAGACGACGAAAATAAATCATCATGTTCGGGATGGAGTATT
TTTCGATCGTTTGTTTCGCCATGTAGGGAGTGTCGAGCTAGTAAGCCCAATGCAATTCAACCGCGTCCCATTCAAGGAGGCTTCAACTTGACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCCTCACAAAGAAGCCTAATTTGAGTAGCACCACAAATAATTGGGTTAACTCTCTTTCCTTTTCTGGCTATTTGAACTCCAAAGACCGGGAACAACCCAATTC
GGGTCCGATTAAAACTTTGGAGAAGAAGATCCAACCGGTCGACTATGGAGTCAAGTTCGGTCCGACGCATCGAGGTTCAAGTGTGGGCGATGGCAAGATTTTAGGCTTAT
CTGGAGCAAATAGATCATCACCATACATTATGAGAAACAACAGTATTAGAAGGGGAAGTCAAAAGATAAGAGACGACGAAAATAAATCATCATGTTCGGGATGGAGTATT
TTTCGATCGTTTGTTTCGCCATGTAGGGAGTGTCGAGCTAGTAAGCCCAATGCAATTCAACCGCGTCCCATTCAAGGAGGCTTCAACTTGACCTAA
Protein sequenceShow/hide protein sequence
MGILTKKPNLSSTTNNWVNSLSFSGYLNSKDREQPNSGPIKTLEKKIQPVDYGVKFGPTHRGSSVGDGKILGLSGANRSSPYIMRNNSIRRGSQKIRDDENKSSCSGWSI
FRSFVSPCRECRASKPNAIQPRPIQGGFNLT