CuGenDBv2

Gene ID	Lsi02G007750
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein yippee-like
Genome location	chr02:7121899..7125408
RNA-Seq Expression	Lsi02G007750
Synteny	Lsi02G007750
Gene Ontology terms	GO:0000151 - ubiquitin ligase complex (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR004910 - Yippee/Mis18/Cereblon IPR034751 - Yippee domain IPR039058 - Yippee family

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004146613.1 protein yippee-like At5g53940 isoform X1 [Cucumis sativus]

1.1e-67

96.85

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Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQG+AYLFSNVVNITSGPKEERLMLSGMH VEDIFCC CGQILGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIIEEMMEDLNGDAHPGSSDMENP
        ERWRI+EEMMEDLNGDAHPGSSDMENP
Subjt:  ERWRIIEEMMEDLNGDAHPGSSDMENP

XP_008442812.1 PREDICTED: protein yippee-like At5g53940 [Cucumis melo]

1.5e-67

96.06

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Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGR+FLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQG+AYLFSNVVNITSGPKEERLMLSGMH VEDIFCC CGQILGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIIEEMMEDLNGDAHPGSSDMENP
        ERWRI+EEMMEDLNGDAHPGSSDMENP
Subjt:  ERWRIIEEMMEDLNGDAHPGSSDMENP

XP_022140248.1 protein yippee-like At5g53940 [Momordica charantia]

8.7e-68

95.28

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Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNC QG+AYLFSNVVN+T+GPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIIEEMMEDLNGDAHPGSSDMENP
        ERWRI+EEMMEDLN DAHPGSSDMENP
Subjt:  ERWRIIEEMMEDLNGDAHPGSSDMENP

XP_022927222.1 protein yippee-like At5g53940 [Cucurbita moschata]

1.6e-69

98.43

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Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQG+AYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIIEEMMEDLNGDAHPGSSDMENP
        ERWRI+EEMMEDLNGDAHPGSSDMENP
Subjt:  ERWRIIEEMMEDLNGDAHPGSSDMENP

XP_038893524.1 protein yippee-like At5g53940 [Benincasa hispida]

2.5e-67

96.06

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Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQ+YKEGKFVL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIIEEMMEDLNGDAHPGSSDMENP
        ERW I+EEMMEDLNGDAH G SDMENP
Subjt:  ERWRIIEEMMEDLNGDAHPGSSDMENP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LRZ0 Protein yippee-like

5.5e-68

96.85

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Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQG+AYLFSNVVNITSGPKEERLMLSGMH VEDIFCC CGQILGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIIEEMMEDLNGDAHPGSSDMENP
        ERWRI+EEMMEDLNGDAHPGSSDMENP
Subjt:  ERWRIIEEMMEDLNGDAHPGSSDMENP

A0A1S3B6L5 Protein yippee-like

7.2e-68

96.06

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Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGR+FLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQG+AYLFSNVVNITSGPKEERLMLSGMH VEDIFCC CGQILGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIIEEMMEDLNGDAHPGSSDMENP
        ERWRI+EEMMEDLNGDAHPGSSDMENP
Subjt:  ERWRIIEEMMEDLNGDAHPGSSDMENP

A0A6J1CHK2 Protein yippee-like

4.2e-68

95.28

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Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNC QG+AYLFSNVVN+T+GPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIIEEMMEDLNGDAHPGSSDMENP
        ERWRI+EEMMEDLN DAHPGSSDMENP
Subjt:  ERWRIIEEMMEDLNGDAHPGSSDMENP

A0A6J1EGK2 Protein yippee-like

7.7e-70

98.43

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Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQG+AYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIIEEMMEDLNGDAHPGSSDMENP
        ERWRI+EEMMEDLNGDAHPGSSDMENP
Subjt:  ERWRIIEEMMEDLNGDAHPGSSDMENP

A0A6J1KNK6 Protein yippee-like

7.7e-70

98.43

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Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQG+AYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIIEEMMEDLNGDAHPGSSDMENP
        ERWRI+EEMMEDLNGDAHPGSSDMENP
Subjt:  ERWRIIEEMMEDLNGDAHPGSSDMENP

SwissProt top hits

e value

%identity

Alignment

P59234 Protein yippee-like

5.4e-36

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Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGR+F++ LEG+ Y C+ C  ++AL+++++S++F+C  GKAYLFS VVN+TSG  E R+M++GMHTV DIFC CCG I+GWKY T H+K QKYKEGK VL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRI
        ER++I
Subjt:  ERWRI

Q9C777 Protein yippee-like At3g11230

1.9e-33

59.05

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Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGR+FLV LEG+SY C+ C  N+AL DDV+S++F    GKAYLFS VVN+ +G KE+R+M++GMHTV DI+C  CG  +GWKY    +K QKYKEGK VL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRI
        ER+++
Subjt:  ERWRI

Q9FN32 Protein yippee-like At5g53940

4.9e-45

64.84

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Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGR+F VELEGRSYRCRFC  ++AL DD++SR+F+C +GKAYLF+  VNI+ GP EERLMLSGMHTV DIFCCCCGQ +GWKY + H+K QKYKEGKFVL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIIEE--MMEDLNGDAHPGSSDMEN
        ER RI++E  +  ++  D H  +SD E+
Subjt:  ERWRIIEE--MMEDLNGDAHPGSSDMEN

Q9LY56 Protein yippee-like At3g55890

4.0e-31

53.33

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Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGRVF+V+LEG  Y C+ C  +++   D++S++F C  G+AYLF+NVVN++ G KE+R+M++G+H V DIFC  CG  +GWKY   H+K QKYKEGK VL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRI
        E ++I
Subjt:  ERWRI

Q9SR97 Protein yippee-like At3g08990

1.7e-34

53.77

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Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGR+F+++LEG  Y C++C  + A+ +D++S++F+C  G+AYLF NVVN+T G KE R+M++G HTV DIFC  CG ++GWKY   +DK QKYKEGKF+L
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRII
        ER++++
Subjt:  ERWRII

Arabidopsis top hits

e value

%identity

Alignment

AT2G40110.1 Yippee family putative zinc-binding protein

1.4e-34

57.14

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Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGR+F+V LEG+ Y C+ C  ++A  +D++S++F+C  GKAYLF+ V N++ G  EERLM++G HTV DIFC  CG I+GWKY T H+K QKYKEGK VL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRI
        ER++I
Subjt:  ERWRI

AT3G08990.1 Yippee family putative zinc-binding protein

1.2e-35

53.77

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Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGR+F+++LEG  Y C++C  + A+ +D++S++F+C  G+AYLF NVVN+T G KE R+M++G HTV DIFC  CG ++GWKY   +DK QKYKEGKF+L
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRII
        ER++++
Subjt:  ERWRII

AT3G08990.2 Yippee family putative zinc-binding protein

1.2e-35

53.77

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Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGR+F+++LEG  Y C++C  + A+ +D++S++F+C  G+AYLF NVVN+T G KE R+M++G HTV DIFC  CG ++GWKY   +DK QKYKEGKF+L
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRII
        ER++++
Subjt:  ERWRII

AT3G11230.1 Yippee family putative zinc-binding protein

1.4e-34

59.05

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Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGR+FLV LEG+SY C+ C  N+AL DDV+S++F    GKAYLFS VVN+ +G KE+R+M++GMHTV DI+C  CG  +GWKY    +K QKYKEGK VL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRI
        ER+++
Subjt:  ERWRI

AT5G53940.1 Yippee family putative zinc-binding protein

3.4e-46

64.84

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Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGR+F VELEGRSYRCRFC  ++AL DD++SR+F+C +GKAYLF+  VNI+ GP EERLMLSGMHTV DIFCCCCGQ +GWKY + H+K QKYKEGKFVL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIIEE--MMEDLNGDAHPGSSDMEN
        ER RI++E  +  ++  D H  +SD E+
Subjt:  ERWRIIEE--MMEDLNGDAHPGSSDMEN

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGTAGGGTTTTTCTTGTTGAATTGGAAGGCAGGTCTTACAGATGCCGCTTCTGTAACAACAATGTCGCTCTTGCCGATGACGTCCTCTCTCGGACTTTCAATTGCAG
TCAAGGGAAGGCATATCTTTTCAGCAATGTAGTGAATATAACATCTGGACCTAAGGAGGAGAGGTTGATGCTTTCTGGTATGCACACTGTGGAAGATATCTTTTGTTGCT
GTTGCGGACAAATTCTTGGATGGAAATATGTAACTACACATGACAAATACCAAAAGTACAAGGAGGGGAAGTTTGTTCTTGAGAGATGGAGAATAATTGAGGAGATGATG
GAAGACTTAAATGGAGATGCTCATCCTGGTTCAAGCGATATGGAAAATCCTTAG

mRNA sequence

Show/hide mRNA sequence

GTTGAAAGGAAACGGCTACTGGACATCTCGCAAACCGACCACGCATGAGAATATTTTCAAGTTCGTTATTTTGATTTTTCTCTTAGAGGAGAGGGGGATGAATTTTCTGG
GAGCTTAGTTAGGTCTTGAATTTGGGATTCTAGGGTTTTAATGGGTAGGGTTTTTCTTGTTGAATTGGAAGGCAGGTCTTACAGATGCCGCTTCTGTAACAACAATGTCG
CTCTTGCCGATGACGTCCTCTCTCGGACTTTCAATTGCAGTCAAGGGAAGGCATATCTTTTCAGCAATGTAGTGAATATAACATCTGGACCTAAGGAGGAGAGGTTGATG
CTTTCTGGTATGCACACTGTGGAAGATATCTTTTGTTGCTGTTGCGGACAAATTCTTGGATGGAAATATGTAACTACACATGACAAATACCAAAAGTACAAGGAGGGGAA
GTTTGTTCTTGAGAGATGGAGAATAATTGAGGAGATGATGGAAGACTTAAATGGAGATGCTCATCCTGGTTCAAGCGATATGGAAAATCCTTAGTGAGTTTCTGCCATAT
TCTCTCAGAATAAGGAAATTGAAGCGTACATGTCAAAGTGTTGTATAACTTGTATGTAGAAACAATTCTAGAGGCTGTAGAACTACTATTGAAGTGCATGACCATAATCT
ATAATATATATCATAAGCTTTTTCTGGAATCGCATCTTGAATGCTCGATTCTCCCCTCTTACAATCCCTTTTCATACAGTAAGTACATCTTTGTAGATTGCTCATGGAAC
CATCAAAGATAACTTTGTATCTAGTTTATTAAAAATGTGTTTTCTTATGTATACATGAAACCGGAGGAATGTGTTCCACAATCCCATTTGTAAAAAATCAGTGTGAACTC
GTTATTATATACCAAACATCATATTAATCATTCT

Protein sequence

Show/hide protein sequence

MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVLERWRIIEEMM
EDLNGDAHPGSSDMENP

Lsi02G007750 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome