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Lsi02G007890 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G007890
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionnuclear envelope pore membrane protein POM 121-like
Genome locationchr02:7293459..7294380
RNA-Seq ExpressionLsi02G007890
SyntenyLsi02G007890
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019594.1 hypothetical protein SDJN02_18557, partial [Cucurbita argyrosperma subsp. argyrosperma]8.4e-0967.61Show/hide
Query:  ETMEEASQHRD-GGCASNYYKVTFNSSSLYESNSNSKGNKEIAIGS----EARAEVEVEAEAKGIDLNLKL
        ETM EASQ+RD GG AS+Y KVTFNSSS     S  KGNKEI IGS    EA AE E EAEA+GIDL+LKL
Subjt:  ETMEEASQHRD-GGCASNYYKVTFNSSSLYESNSNSKGNKEIAIGS----EARAEVEVEAEAKGIDLNLKL

XP_008443003.1 PREDICTED: uncharacterized protein DDB_G0271670-like [Cucumis melo]4.0e-1171.21Show/hide
Query:  ETMEEASQHRDGGCASNYYKVTFNSSSLYESNSNSKGNKEIAIGSEARAEVEVEAEAKGIDLNLKL
        ETM E  QHRDGGC S+ YK+ FN SSLYESNSN+KGN+EIAI S A A  E EAE +GIDLNLKL
Subjt:  ETMEEASQHRDGGCASNYYKVTFNSSSLYESNSNSKGNKEIAIGSEARAEVEVEAEAKGIDLNLKL

XP_023001726.1 trinucleotide repeat-containing gene 18 protein-like [Cucurbita maxima]4.9e-0971.64Show/hide
Query:  ETMEEASQHRD-GGCASNYYKVTFNSSSLYESNSNSKGNKEIAIGSEARAEVEVEAEAKGIDLNLKL
        ETM EASQ+RD GG AS+Y KVTFNSSS     S SKGNKEI IGS    EVE EAEA+GIDLNLKL
Subjt:  ETMEEASQHRD-GGCASNYYKVTFNSSSLYESNSNSKGNKEIAIGSEARAEVEVEAEAKGIDLNLKL

XP_031738182.1 uncharacterized protein LOC105434463 [Cucumis sativus]2.2e-0967.16Show/hide
Query:  ETMEEASQHRD-GGCASNYYKVTFNSSSLYESNSNSKGNKEIAIGSEARAEVEVEAEAKGIDLNLKL
        ETM E  QHRD GGC S+YYK+ FN SSLYESNSN+KGN+E+ + S   A  E EAEA+GIDLNLKL
Subjt:  ETMEEASQHRD-GGCASNYYKVTFNSSSLYESNSNSKGNKEIAIGSEARAEVEVEAEAKGIDLNLKL

XP_038895159.1 uncharacterized protein DDB_G0271670-like [Benincasa hispida]3.5e-1579.71Show/hide
Query:  ETMEEASQHRDGGCASNYYKVTFN-SSSLYESNSNSKGNKEIAIGS--EARAEVEVEAEAKGIDLNLKL
        ETM EASQHRDGGC S+YYKVTFN SSS+YESNSNSKGNKE  IGS   A A+VE EAEA GIDLNLKL
Subjt:  ETMEEASQHRDGGCASNYYKVTFN-SSSLYESNSNSKGNKEIAIGS--EARAEVEVEAEAKGIDLNLKL

TrEMBL top hitse value%identityAlignment
A0A0A0LSF6 Uncharacterized protein1.1e-0967.16Show/hide
Query:  ETMEEASQHRD-GGCASNYYKVTFNSSSLYESNSNSKGNKEIAIGSEARAEVEVEAEAKGIDLNLKL
        ETM E  QHRD GGC S+YYK+ FN SSLYESNSN+KGN+E+ + S   A  E EAEA+GIDLNLKL
Subjt:  ETMEEASQHRD-GGCASNYYKVTFNSSSLYESNSNSKGNKEIAIGSEARAEVEVEAEAKGIDLNLKL

A0A1S3B6J8 uncharacterized protein DDB_G0271670-like2.0e-1171.21Show/hide
Query:  ETMEEASQHRDGGCASNYYKVTFNSSSLYESNSNSKGNKEIAIGSEARAEVEVEAEAKGIDLNLKL
        ETM E  QHRDGGC S+ YK+ FN SSLYESNSN+KGN+EIAI S A A  E EAE +GIDLNLKL
Subjt:  ETMEEASQHRDGGCASNYYKVTFNSSSLYESNSNSKGNKEIAIGSEARAEVEVEAEAKGIDLNLKL

A0A6J1EGJ1 nuclear envelope pore membrane protein POM 121-like5.3e-0969.35Show/hide
Query:  EASQHRDGGCASNYYKVTFNSSSLYESNSNSKGNKEIAIGSEARAEVEVEAEAKGIDLNLKL
        EASQ+RDGG AS+Y KVTFNSSS     S  KGNKEI IGS    EVE EAEA+GIDL+LKL
Subjt:  EASQHRDGGCASNYYKVTFNSSSLYESNSNSKGNKEIAIGSEARAEVEVEAEAKGIDLNLKL

A0A6J1JZ90 uncharacterized protein LOC1114901871.0e-0454.41Show/hide
Query:  ETMEEASQHRDGGCASNYYKVTFNSSSLYESNSNSKGNKEIAIGS--EARAEVEVEAEAKGIDLNLKL
        ETM EAS HRDGG ASNY K+TF++S+  ++ S SKG +   IGS  E + E E E E   IDL+LKL
Subjt:  ETMEEASQHRDGGCASNYYKVTFNSSSLYESNSNSKGNKEIAIGS--EARAEVEVEAEAKGIDLNLKL

A0A6J1KHF7 trinucleotide repeat-containing gene 18 protein-like2.4e-0971.64Show/hide
Query:  ETMEEASQHRD-GGCASNYYKVTFNSSSLYESNSNSKGNKEIAIGSEARAEVEVEAEAKGIDLNLKL
        ETM EASQ+RD GG AS+Y KVTFNSSS     S SKGNKEI IGS    EVE EAEA+GIDLNLKL
Subjt:  ETMEEASQHRD-GGCASNYYKVTFNSSSLYESNSNSKGNKEIAIGSEARAEVEVEAEAKGIDLNLKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGAAACTATGGAGGAGGCTTCACAGCATAGAGATGGAGGATGTGCCTCAAATTACTACAAAGTTACATTTAACTCCTCCTCCTTGTATGAATCAAACTCAAACTC
AAAGGGCAACAAAGAAATTGCCATCGGCTCCGAAGCTAGAGCCGAAGTCGAAGTCGAAGCCGAAGCCAAAGGCATCGATCTGAATTTGAAGCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGAAACTATGGAGGAGGCTTCACAGCATAGAGATGGAGGATGTGCCTCAAATTACTACAAAGTTACATTTAACTCCTCCTCCTTGTATGAATCAAACTCAAACTC
AAAGGGCAACAAAGAAATTGCCATCGGCTCCGAAGCTAGAGCCGAAGTCGAAGTCGAAGCCGAAGCCAAAGGCATCGATCTGAATTTGAAGCTGTAA
Protein sequenceShow/hide protein sequence
MVETMEEASQHRDGGCASNYYKVTFNSSSLYESNSNSKGNKEIAIGSEARAEVEVEAEAKGIDLNLKL