; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G008340 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G008340
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationchr02:7820161..7820403
RNA-Seq ExpressionLsi02G008340
SyntenyLsi02G008340
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR011992 - EF-hand domain pair


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150479.1 probable calcium-binding protein CML31 [Cucumis sativus]1.9e-2375.29Show/hide
Query:  MAVFDSDDDRLLRMEEFGRLVEG-------DGEEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV
        +A FDSD D LL MEEFGRLVEG       D  EVREAFQMYEMEGLGVITP+SLRR LSRL ES SVGDCKR+IAKFDL+GD V
Subjt:  MAVFDSDDDRLLRMEEFGRLVEG-------DGEEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV

XP_008437697.1 PREDICTED: probable calcium-binding protein CML31 [Cucumis melo]9.2e-2373.81Show/hide
Query:  MAVFDSDDDRLLRMEEFGRLVEG------DGEEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV
        +A +DSD D LL MEEFGRLV+G      D  EVREAFQMYEMEGLGVITP+SLRR LSRL ES SVGDCKR+IAKFDL+GD V
Subjt:  MAVFDSDDDRLLRMEEFGRLVEG------DGEEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV

XP_022962715.1 probable calcium-binding protein CML31 [Cucurbita moschata]7.3e-2065.43Show/hide
Query:  MAVFDSDDDRLLRMEEFGRLVE---GDGEEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV
        +A +DSDDD LL + EF RLVE   G+G+E++EAF+MYEMEGLGVIT +SLRR LS+L +S S+GDC R+IAKFD+NGD V
Subjt:  MAVFDSDDDRLLRMEEFGRLVE---GDGEEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV

XP_022989992.1 putative calcium-binding protein CML19 [Cucurbita maxima]9.5e-2065.43Show/hide
Query:  MAVFDSDDDRLLRMEEFGRLVE---GDGEEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV
        +A +DSDDD LL + EF R VE   G+G+E++EAF+MYEMEGLGVIT +SLRR LS+L ES S+GDC R+IAKFD+NGD V
Subjt:  MAVFDSDDDRLLRMEEFGRLVE---GDGEEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV

XP_038875509.1 putative calcium-binding protein CML23 [Benincasa hispida]3.2e-2378.48Show/hide
Query:  MAVFDSDDDRLLRMEEFGRLVEGDG-EEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV
        +A FD + D LL MEEFGRLVEGD  EEVREAFQMYEMEGLGVITP+SLRR LSRL ES SVGDCK++IAKFD+NGD V
Subjt:  MAVFDSDDDRLLRMEEFGRLVEGDG-EEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV

TrEMBL top hitse value%identityAlignment
A0A0A0KPM3 Uncharacterized protein9.0e-2475.29Show/hide
Query:  MAVFDSDDDRLLRMEEFGRLVEG-------DGEEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV
        +A FDSD D LL MEEFGRLVEG       D  EVREAFQMYEMEGLGVITP+SLRR LSRL ES SVGDCKR+IAKFDL+GD V
Subjt:  MAVFDSDDDRLLRMEEFGRLVEG-------DGEEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV

A0A1S3AUA4 probable calcium-binding protein CML314.5e-2373.81Show/hide
Query:  MAVFDSDDDRLLRMEEFGRLVEG------DGEEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV
        +A +DSD D LL MEEFGRLV+G      D  EVREAFQMYEMEGLGVITP+SLRR LSRL ES SVGDCKR+IAKFDL+GD V
Subjt:  MAVFDSDDDRLLRMEEFGRLVEG------DGEEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV

A0A5D3E2X7 Putative calcium-binding protein CML314.5e-2373.81Show/hide
Query:  MAVFDSDDDRLLRMEEFGRLVEG------DGEEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV
        +A +DSD D LL MEEFGRLV+G      D  EVREAFQMYEMEGLGVITP+SLRR LSRL ES SVGDCKR+IAKFDL+GD V
Subjt:  MAVFDSDDDRLLRMEEFGRLVEG------DGEEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV

A0A6J1HFW4 probable calcium-binding protein CML313.5e-2065.43Show/hide
Query:  MAVFDSDDDRLLRMEEFGRLVE---GDGEEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV
        +A +DSDDD LL + EF RLVE   G+G+E++EAF+MYEMEGLGVIT +SLRR LS+L +S S+GDC R+IAKFD+NGD V
Subjt:  MAVFDSDDDRLLRMEEFGRLVE---GDGEEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV

A0A6J1JHC9 putative calcium-binding protein CML194.6e-2065.43Show/hide
Query:  MAVFDSDDDRLLRMEEFGRLVE---GDGEEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV
        +A +DSDDD LL + EF R VE   G+G+E++EAF+MYEMEGLGVIT +SLRR LS+L ES S+GDC R+IAKFD+NGD V
Subjt:  MAVFDSDDDRLLRMEEFGRLVE---GDGEEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV

SwissProt top hitse value%identityAlignment
Q8RYJ8 Putative calcium-binding protein CML194.5e-1250Show/hide
Query:  DSDDDRLLRMEEFGRLV----EGDGEE----VREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV
        D+DDD LL  EEF +L      GD EE    + EAF+MYEMEG G ITP SL+R LS+L     + +C+ +I +FDL+GD V
Subjt:  DSDDDRLLRMEEFGRLV----EGDGEE----VREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV

Q8RYJ9 Putative calcium-binding protein CML233.6e-1448.91Show/hide
Query:  MAVFDSDDDRLLRMEEFGRLV---EGDGEE-----------VREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV
        MA+ D+D D LL  EEF RLV   E DG+E           +REAF MYEMEG G ITP+SL+  LS+L   + V +C+ +I +FD+NGD V
Subjt:  MAVFDSDDDRLLRMEEFGRLV---EGDGEE-----------VREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV

Q8RYK0 Probable calcium-binding protein CML314.0e-1350.57Show/hide
Query:  MAVFDSDDDRLLRMEEFGRLV---------EGDGEEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV
        +A  D+D D LL   EF RLV         E  G  +REAF MYEMEG G ITP SLRR L RL     + DC+ +I +FDLNGD V
Subjt:  MAVFDSDDDRLLRMEEFGRLV---------EGDGEEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV

Q9FIH9 Calcium-binding protein CML372.4e-1051.85Show/hide
Query:  DSDDDRLLRMEEFGRLVEG-DG------EEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV
        D D D  +  EEF +L+EG DG      +E++EAF MY MEG   IT  SLRRTLSRL ES +V  CK +I  FD N D V
Subjt:  DSDDDRLLRMEEFGRLVEG-DG------EEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV

Q9SRE6 Calcium-binding protein CML381.6e-0943.04Show/hide
Query:  DSDDDRLLRMEEFGRLVEGDGE-----EVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV
        D+D D +L  EEF +L++ D E     E++ AF++Y  EG   ITP SL+  L +L ES +  DC+ +I+ FDLN D V
Subjt:  DSDDDRLLRMEEFGRLVEGDGE-----EVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV

Arabidopsis top hitse value%identityAlignment
AT1G76650.1 calmodulin-like 381.1e-1043.04Show/hide
Query:  DSDDDRLLRMEEFGRLVEGDGE-----EVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV
        D+D D +L  EEF +L++ D E     E++ AF++Y  EG   ITP SL+  L +L ES +  DC+ +I+ FDLN D V
Subjt:  DSDDDRLLRMEEFGRLVEGDGE-----EVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV

AT1G76650.2 calmodulin-like 381.1e-1043.04Show/hide
Query:  DSDDDRLLRMEEFGRLVEGDGE-----EVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV
        D+D D +L  EEF +L++ D E     E++ AF++Y  EG   ITP SL+  L +L ES +  DC+ +I+ FDLN D V
Subjt:  DSDDDRLLRMEEFGRLVEGDGE-----EVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV

AT1G76650.3 calmodulin-like 381.1e-1043.04Show/hide
Query:  DSDDDRLLRMEEFGRLVEGDGE-----EVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV
        D+D D +L  EEF +L++ D E     E++ AF++Y  EG   ITP SL+  L +L ES +  DC+ +I+ FDLN D V
Subjt:  DSDDDRLLRMEEFGRLVEGDGE-----EVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV

AT3G01830.1 Calcium-binding EF-hand family protein4.3e-1047.5Show/hide
Query:  DSDDDRLLRMEEFGRLVEGDGEE------VREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV
        +S DD+ L +E+F +LVE +GEE      ++EAF++YE E  G ITP SL+R LS L ES S+ DC+ +I++FD+N D +
Subjt:  DSDDDRLLRMEEFGRLVEGDGEE------VREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV

AT5G42380.1 calmodulin like 371.7e-1151.85Show/hide
Query:  DSDDDRLLRMEEFGRLVEG-DG------EEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV
        D D D  +  EEF +L+EG DG      +E++EAF MY MEG   IT  SLRRTLSRL ES +V  CK +I  FD N D V
Subjt:  DSDDDRLLRMEEFGRLVEG-DG------EEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTCTTCGATTCGGACGACGACAGGCTGCTGAGGATGGAGGAGTTTGGGAGGTTGGTGGAGGGGGATGGTGAAGAGGTGAGGGAGGCTTTCCAAATGTATGAAAT
GGAAGGATTGGGAGTGATTACGCCGATGAGCTTGCGGCGGACGCTCAGTCGCCTTTGGGAGTCGATGAGCGTCGGCGATTGCAAGAGAGTGATCGCTAAATTTGATTTGA
ATGGCGATAGAGTTTTTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTCTTCGATTCGGACGACGACAGGCTGCTGAGGATGGAGGAGTTTGGGAGGTTGGTGGAGGGGGATGGTGAAGAGGTGAGGGAGGCTTTCCAAATGTATGAAAT
GGAAGGATTGGGAGTGATTACGCCGATGAGCTTGCGGCGGACGCTCAGTCGCCTTTGGGAGTCGATGAGCGTCGGCGATTGCAAGAGAGTGATCGCTAAATTTGATTTGA
ATGGCGATAGAGTTTTTTTTTAA
Protein sequenceShow/hide protein sequence
MAVFDSDDDRLLRMEEFGRLVEGDGEEVREAFQMYEMEGLGVITPMSLRRTLSRLWESMSVGDCKRVIAKFDLNGDRVFF