; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G008500 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G008500
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein of unknown function, DUF584
Genome locationchr02:7978062..7978478
RNA-Seq ExpressionLsi02G008500
SyntenyLsi02G008500
Gene Ontology termsNA
InterPro domainsIPR007608 - Senescence regulator S40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABQ53634.1 unknown [Cucumis melo]1.7e-5385.92Show/hide
Query:  MAEEFQESEVIFSD-RDHCRYLRRDDDDDFFNYTSRRGIV-AAPRNKYNHR-TMRDG-GRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLV
        MAEEFQESEVIFSD RDH RYLRR DDDDFFN+ SRRGI+ A PR KY+HR TMRDG  RLSKKEIARSLPV IPER   R AEEDDDM+EEEIIPPHLV
Subjt:  MAEEFQESEVIFSD-RDHCRYLRRDDDDDFFNYTSRRGIV-AAPRNKYNHR-TMRDG-GRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLV

Query:  AERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET
         ERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET
Subjt:  AERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET

XP_004147426.1 uncharacterized protein LOC101213935 [Cucumis sativus]4.7e-5176.71Show/hide
Query:  MAEEFQESEVIFSD-RDHCRYLRRDDDDDFFNY------TSRRGIVAAPRNKYNHRTMRDG-GRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIP
        MA+EFQES++ FSD RDHCR+LRR DDDDFFN+       SRRG++A PR KY+HRTMRD   RLSKKEI+RSLPV IPER   R  EEDDDM+E+EIIP
Subjt:  MAEEFQESEVIFSD-RDHCRYLRRDDDDDFFNY------TSRRGIVAAPRNKYNHRTMRDG-GRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIP

Query:  PHLVAERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET
        PHLVAERRVARKMAFSVCTGNGRTLKGRDLSRVRNS+LR+TGFLET
Subjt:  PHLVAERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET

XP_008443750.1 PREDICTED: uncharacterized protein LOC103487260 [Cucumis melo]1.3e-5385.92Show/hide
Query:  MAEEFQESEVIFSD-RDHCRYLRRDDDDDFFNYTSRRGIV-AAPRNKYNHR-TMRDG-GRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLV
        MAEEFQESEVIFSD RDH RYLRR DDDDFFN+ SRRGI+ A PR KY+HR TMRDG  RLSKKEIARSLPV IPER   R AEEDDDM+EEEIIPPHLV
Subjt:  MAEEFQESEVIFSD-RDHCRYLRRDDDDDFFNYTSRRGIV-AAPRNKYNHR-TMRDG-GRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLV

Query:  AERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET
         ERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET
Subjt:  AERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET

XP_023520036.1 uncharacterized protein LOC111783341 [Cucurbita pepo subsp. pepo]2.8e-5176.76Show/hide
Query:  MAEEFQESEVIFSDRDHCRYLRRDDDD----DFFNYTSRRGIVAAPRNKYNHRTMRDGGRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLV
        MAEEFQESEVIFSD DH RYL R DDD    DFFN+  R G+V APRNKY  RT+RDGGRLSKK +A SLPVGIPER  +R  EE+D+M+EEE+IPPH+V
Subjt:  MAEEFQESEVIFSDRDHCRYLRRDDDD----DFFNYTSRRGIVAAPRNKYNHRTMRDGGRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLV

Query:  AERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET
        AERR+A KMAFSVCTGNGRTLKGRDL RVRNSILRMTGFLET
Subjt:  AERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET

XP_038895158.1 uncharacterized protein LOC120083461 [Benincasa hispida]8.9e-5884.4Show/hide
Query:  MAEEFQESEVIFSDRDHCRYLRRDDDD---DFFNYTSRRGIVAAPRNKYNHRTMRDGGRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLVA
        MAEEFQES+VIFSD  HCRYL RDDDD   DFFN+ SRRGIVAAPR KY+HRTMRDGGRLSKKEIARSLPV IPERI +R+++EDD+M+ EEI+PPHLVA
Subjt:  MAEEFQESEVIFSDRDHCRYLRRDDDD---DFFNYTSRRGIVAAPRNKYNHRTMRDGGRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLVA

Query:  ERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET
        ERRVA KMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET
Subjt:  ERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET

TrEMBL top hitse value%identityAlignment
A0A1S3B8R0 uncharacterized protein LOC1034872606.4e-5485.92Show/hide
Query:  MAEEFQESEVIFSD-RDHCRYLRRDDDDDFFNYTSRRGIV-AAPRNKYNHR-TMRDG-GRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLV
        MAEEFQESEVIFSD RDH RYLRR DDDDFFN+ SRRGI+ A PR KY+HR TMRDG  RLSKKEIARSLPV IPER   R AEEDDDM+EEEIIPPHLV
Subjt:  MAEEFQESEVIFSD-RDHCRYLRRDDDDDFFNYTSRRGIV-AAPRNKYNHR-TMRDG-GRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLV

Query:  AERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET
         ERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET
Subjt:  AERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET

A0A5A7UU57 Uncharacterized protein8.4e-5485.92Show/hide
Query:  MAEEFQESEVIFSD-RDHCRYLRRDDDDDFFNYTSRRGIV-AAPRNKYNHR-TMRDG-GRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLV
        MAEEFQESEVIFSD RDH RYLRR DDDDFFN+ SRRGI+ A PR KY+HR TMRDG  RLSKKEIARSLPV IPER   R AEEDDDM+EEEIIPPHLV
Subjt:  MAEEFQESEVIFSD-RDHCRYLRRDDDDDFFNYTSRRGIV-AAPRNKYNHR-TMRDG-GRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLV

Query:  AERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET
         ERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET
Subjt:  AERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET

A0A6J1EK43 uncharacterized protein LOC1114340575.1e-5176.76Show/hide
Query:  MAEEFQESEVIFSDRDHCRYLRRDDDD----DFFNYTSRRGIVAAPRNKYNHRTMRDGGRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLV
        MAEEFQESEVIFSD DH RYL R DDD    DFFN   R G+V APRNKY  RT+RDGGRLSKK +A SLPVGIPER  +R  EE+D+M+EEE+IPPH+V
Subjt:  MAEEFQESEVIFSDRDHCRYLRRDDDD----DFFNYTSRRGIVAAPRNKYNHRTMRDGGRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLV

Query:  AERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET
        AERR+A KMAFSVCTGNGRTLKGRDL RVRNSILRMTGFLET
Subjt:  AERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET

A5Y727 Uncharacterized protein8.4e-5485.92Show/hide
Query:  MAEEFQESEVIFSD-RDHCRYLRRDDDDDFFNYTSRRGIV-AAPRNKYNHR-TMRDG-GRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLV
        MAEEFQESEVIFSD RDH RYLRR DDDDFFN+ SRRGI+ A PR KY+HR TMRDG  RLSKKEIARSLPV IPER   R AEEDDDM+EEEIIPPHLV
Subjt:  MAEEFQESEVIFSD-RDHCRYLRRDDDDDFFNYTSRRGIV-AAPRNKYNHR-TMRDG-GRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLV

Query:  AERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET
         ERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET
Subjt:  AERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET

B0F6T1 Uncharacterized protein2.3e-5176.71Show/hide
Query:  MAEEFQESEVIFSD-RDHCRYLRRDDDDDFFNY------TSRRGIVAAPRNKYNHRTMRDG-GRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIP
        MA+EFQES++ FSD RDHCR+LRR DDDDFFN+       SRRG++A PR KY+HRTMRD   RLSKKEI+RSLPV IPER   R  EEDDDM+E+EIIP
Subjt:  MAEEFQESEVIFSD-RDHCRYLRRDDDDDFFNY------TSRRGIVAAPRNKYNHRTMRDG-GRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIP

Query:  PHLVAERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET
        PHLVAERRVARKMAFSVCTGNGRTLKGRDLSRVRNS+LR+TGFLET
Subjt:  PHLVAERRVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLET

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G29640.1 Protein of unknown function, DUF5842.2e-2247.14Show/hide
Query:  MAEEFQESEVIFSDRDHCRYLRRDDDDDFFNY--TSRRGIVAAPRNKYNHRTMRDGGRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLVAE
        M+EEF ESE+IFSD ++    RR+D ++  N      R       NK + R+       +    + SLPV IP R      E  DD    ++IPPHL+  
Subjt:  MAEEFQESEVIFSDRDHCRYLRRDDDDDFFNY--TSRRGIVAAPRNKYNHRTMRDGGRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLVAE

Query:  RRV-ARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLE
        RR+   +MAFSVCTGNGRTLKGRDLSRVRNS+L++TGFLE
Subjt:  RRV-ARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLE

AT2G34340.1 Protein of unknown function, DUF5845.8e-2346.58Show/hide
Query:  MAEEFQESEVIFSDRDHCRYLRRDDDDDFFNYTSRRGIVAAPRNKYNHRTMRDGGRLSKKEIARSLPVGIPERICQR-MAEEDDDMNEE-------EIIP
        MAEEF ESEV+FSD      L +++++  F     R        K   R  R      K  ++ SLPV IPE I +R + +E+D+ +EE       E+IP
Subjt:  MAEEFQESEVIFSDRDHCRYLRRDDDDDFFNYTSRRGIVAAPRNKYNHRTMRDGGRLSKKEIARSLPVGIPERICQR-MAEEDDDMNEE-------EIIP

Query:  PHLVAERRV-ARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLE
        PH++  RR+   +MAFSVC+G+GRTLKGRDLSRVRNS+LR+TGFLE
Subjt:  PHLVAERRV-ARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLE

AT4G04630.1 Protein of unknown function, DUF5843.0e-1152.46Show/hide
Query:  AEEDDDMNEEEIIPPHLVAERRVARKM--AFSVCTGNGRTLKGRDLSRVRNSILRMTGFLE
        A++DD+ ++  ++PPH    R++AR    +FS+C G GRTLKGRDLS+VRN++L  TGFLE
Subjt:  AEEDDDMNEEEIIPPHLVAERRVARKM--AFSVCTGNGRTLKGRDLSRVRNSILRMTGFLE

AT4G18980.1 AtS40-31.2e-1544.2Show/hide
Query:  MAEEFQESEVIFSDRDHCRYLRRDDDDDFFNYTSRRGIVAAPRNKYNHRTMRDGGRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLVAE-R
        M+EEFQESEVIFSD     + R+D                   NK +H    +  R S ++   S PV IP R   R  EE     E E+ PPH++ E R
Subjt:  MAEEFQESEVIFSDRDHCRYLRRDDDDDFFNYTSRRGIVAAPRNKYNHRTMRDGGRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLVAE-R

Query:  RVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLE
        R   +MAFS C     TLKGRDLSR RN++LRMTGFLE
Subjt:  RVARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLE

AT5G45630.1 Protein of unknown function, DUF5846.9e-1640.88Show/hide
Query:  MAEEFQESEVIFSDRDHCRYLRRDDDDDFFNYTSRRGIVAAPRNKYNHRTMRDGGRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLVAERR
        M+EEFQES++IFSD+       R        YT            YN R     G    +   ++ PV IP     R  E D    E++  PPH++ ERR
Subjt:  MAEEFQESEVIFSDRDHCRYLRRDDDDDFFNYTSRRGIVAAPRNKYNHRTMRDGGRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLVAERR

Query:  VARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLE
        +  ++AFS C     TLKGRDLSR RNS+LRMTGFLE
Subjt:  VARKMAFSVCTGNGRTLKGRDLSRVRNSILRMTGFLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAAGAATTTCAGGAATCCGAAGTGATTTTCTCCGATCGCGATCACTGCCGTTACCTCCGCCGTGACGACGACGACGATTTCTTCAACTACACCTCCCGCCGCGG
AATAGTTGCGGCACCGCGAAATAAGTATAATCACCGAACGATGCGCGACGGCGGCCGGCTCTCGAAGAAGGAAATCGCGAGGTCGCTTCCGGTAGGAATTCCAGAAAGAA
TCTGCCAGAGGATGGCGGAGGAAGACGACGACATGAACGAAGAGGAAATAATTCCGCCGCACTTAGTGGCGGAGCGACGAGTTGCCCGAAAAATGGCGTTCTCTGTTTGT
ACTGGCAATGGAAGGACGCTGAAAGGACGAGATTTGAGCAGAGTAAGGAATTCAATCCTTCGGATGACCGGATTCTTAGAAACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAAGAATTTCAGGAATCCGAAGTGATTTTCTCCGATCGCGATCACTGCCGTTACCTCCGCCGTGACGACGACGACGATTTCTTCAACTACACCTCCCGCCGCGG
AATAGTTGCGGCACCGCGAAATAAGTATAATCACCGAACGATGCGCGACGGCGGCCGGCTCTCGAAGAAGGAAATCGCGAGGTCGCTTCCGGTAGGAATTCCAGAAAGAA
TCTGCCAGAGGATGGCGGAGGAAGACGACGACATGAACGAAGAGGAAATAATTCCGCCGCACTTAGTGGCGGAGCGACGAGTTGCCCGAAAAATGGCGTTCTCTGTTTGT
ACTGGCAATGGAAGGACGCTGAAAGGACGAGATTTGAGCAGAGTAAGGAATTCAATCCTTCGGATGACCGGATTCTTAGAAACGTGA
Protein sequenceShow/hide protein sequence
MAEEFQESEVIFSDRDHCRYLRRDDDDDFFNYTSRRGIVAAPRNKYNHRTMRDGGRLSKKEIARSLPVGIPERICQRMAEEDDDMNEEEIIPPHLVAERRVARKMAFSVC
TGNGRTLKGRDLSRVRNSILRMTGFLET