; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G008550 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G008550
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description60S ribosomal protein L32, putative
Genome locationchr02:8025996..8028325
RNA-Seq ExpressionLsi02G008550
SyntenyLsi02G008550
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR001515 - Ribosomal protein L32e
IPR036351 - Ribosomal protein L32e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443854.1 PREDICTED: 60S ribosomal protein L32-1 [Cucumis melo]1.9e-6598.5Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD
        MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNV ELELLMMHNRTYCAEIAHD
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

XP_011657475.1 60S ribosomal protein L32-1 [Cucumis sativus]5.6e-6597.74Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD
        MAVPLLSKKIVKKRT+KFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNV ELELLMMHNRTYCAEIAHD
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

XP_022927470.1 60S ribosomal protein L32-1 [Cucurbita moschata]9.5e-6596.99Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD
        MAVPLLSKKIVKKRT+KFKRPQSDRKISVKE+WRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHD
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

XP_022955208.1 60S ribosomal protein L32-1-like [Cucurbita moschata]5.6e-6597.74Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD
        MAVPLL+KKIVKKRT KFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHD
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

XP_038894346.1 60S ribosomal protein L32-1 [Benincasa hispida]5.0e-6699.25Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD
        MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

TrEMBL top hitse value%identityAlignment
A0A0A0LXN1 Uncharacterized protein2.7e-6597.74Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD
        MAVPLLSKKIVKKRT+KFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNV ELELLMMHNRTYCAEIAHD
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

A0A1S3B8Z6 60S ribosomal protein L32-19.2e-6698.5Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD
        MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNV ELELLMMHNRTYCAEIAHD
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

A0A6J1GUI9 60S ribosomal protein L32-1-like2.7e-6597.74Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD
        MAVPLL+KKIVKKRT KFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHD
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

A0A6J1K6F1 60S ribosomal protein L32-1-like2.7e-6597.74Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD
        MAVPLL+KKIVKKRT KFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHD
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

A0A6J1KGP3 60S ribosomal protein L32-14.6e-6596.99Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD
        MAVPLLSKKIVKKRT+KFKRPQSDRKISVKE+WRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHD
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

SwissProt top hitse value%identityAlignment
E2RKA8 60S ribosomal protein L322.3e-4569.23Show/hide
Query:  PLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVST
        PL+  KIVKKRTKKF R QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYG++KKT+H LP+GF+KF+VHNVKELE+L+M N++YCAEIAH+VS+
Subjt:  PLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVST

Query:  RKRKEIVERAAQLDVVVTNKLARLRSQEDE
        + RK IVERAAQL + VTN  ARLRS+E+E
Subjt:  RKRKEIVERAAQLDVVVTNKLARLRSQEDE

P49211 60S ribosomal protein L32-12.5e-6086.47Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD
        MAVPLL+KK+VKKR+ KF RPQSDR+I+VKE+WRRPKGIDSRVRRKFKG TLMPN+GYG+DKKTRHYLPNGFKKFVVHN  ELELLMMHNRTYCAEIAH+
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRK IVERA+QLDVVVTN+LARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

P62910 60S ribosomal protein L322.3e-4569.23Show/hide
Query:  PLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVST
        PL+  KIVKKRTKKF R QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYG++KKT+H LP+GF+KF+VHNVKELE+L+M N++YCAEIAH+VS+
Subjt:  PLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVST

Query:  RKRKEIVERAAQLDVVVTNKLARLRSQEDE
        + RK IVERAAQL + VTN  ARLRS+E+E
Subjt:  RKRKEIVERAAQLDVVVTNKLARLRSQEDE

Q76KA3 60S ribosomal protein L322.3e-4569.23Show/hide
Query:  PLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVST
        PL+  KIVKKRTKKF R QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYG++KKT+H LP+GF+KF+VHNVKELE+L+M N++YCAEIAH+VS+
Subjt:  PLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVST

Query:  RKRKEIVERAAQLDVVVTNKLARLRSQEDE
        + RK IVERAAQL + VTN  ARLRS+E+E
Subjt:  RKRKEIVERAAQLDVVVTNKLARLRSQEDE

Q9FHG2 60S ribosomal protein L32-21.6e-5984.21Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD
        MAVPLL+KK+VKKR+ KF RPQSDR+I+VKE+WRRPKGIDSRVRRKFKG TLMPN+GYG+DKKTRHYLPNGFKKF+VHN  ELELLMMHNRTYCAEIAH+
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        +ST+KRK IVERA+QLDVVV+NKL RLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

Arabidopsis top hitse value%identityAlignment
AT4G18100.1 Ribosomal protein L32e1.8e-6186.47Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD
        MAVPLL+KK+VKKR+ KF RPQSDR+I+VKE+WRRPKGIDSRVRRKFKG TLMPN+GYG+DKKTRHYLPNGFKKFVVHN  ELELLMMHNRTYCAEIAH+
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRK IVERA+QLDVVVTN+LARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

AT5G46430.1 Ribosomal protein L32e1.2e-6084.21Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD
        MAVPLL+KK+VKKR+ KF RPQSDR+I+VKE+WRRPKGIDSRVRRKFKG TLMPN+GYG+DKKTRHYLPNGFKKF+VHN  ELELLMMHNRTYCAEIAH+
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        +ST+KRK IVERA+QLDVVV+NKL RLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

AT5G46430.2 Ribosomal protein L32e1.2e-6084.21Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD
        MAVPLL+KK+VKKR+ KF RPQSDR+I+VKE+WRRPKGIDSRVRRKFKG TLMPN+GYG+DKKTRHYLPNGFKKF+VHN  ELELLMMHNRTYCAEIAH+
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        +ST+KRK IVERA+QLDVVV+NKL RLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTGCCTTTGTTGTCGAAGAAGATCGTGAAGAAGAGGACCAAGAAGTTCAAGAGGCCCCAGAGTGATCGAAAGATCTCCGTCAAGGAAAACTGGAGAAGACCAAA
GGGTATTGATTCCAGAGTGAGAAGAAAGTTTAAAGGATGCACGCTGATGCCAAATATTGGTTACGGCACTGACAAGAAGACCCGCCACTACCTGCCTAATGGGTTCAAGA
AGTTCGTTGTTCATAATGTCAAGGAACTCGAACTCTTGATGATGCACAACAGAACTTACTGTGCTGAGATTGCCCACGATGTTTCAACAAGGAAGAGGAAAGAGATTGTT
GAGAGGGCAGCTCAACTCGATGTTGTAGTTACCAACAAGCTTGCTAGGTTGCGCAGCCAAGAGGATGAATGA
mRNA sequenceShow/hide mRNA sequence
GGCCAAAGGAAACCCTAGTTTCTGTGAGTACTCTCTATTCCGCCGCTAGGGTTTCATTTGTTATTATCCCATTTGAACTCTGTTCATTTGCTATTGTGTTGATAATATTT
CATTATGTAGTTTGAGTGTTTCTCAATCGTCTTGGTTAATCCGTTGTGGTTCACCCACCGTTTCAACTGTATAAGCGAAAATGGCGGTGCCTTTGTTGTCGAAGAAGATC
GTGAAGAAGAGGACCAAGAAGTTCAAGAGGCCCCAGAGTGATCGAAAGATCTCCGTCAAGGAAAACTGGAGAAGACCAAAGGGTATTGATTCCAGAGTGAGAAGAAAGTT
TAAAGGATGCACGCTGATGCCAAATATTGGTTACGGCACTGACAAGAAGACCCGCCACTACCTGCCTAATGGGTTCAAGAAGTTCGTTGTTCATAATGTCAAGGAACTCG
AACTCTTGATGATGCACAACAGAACTTACTGTGCTGAGATTGCCCACGATGTTTCAACAAGGAAGAGGAAAGAGATTGTTGAGAGGGCAGCTCAACTCGATGTTGTAGTT
ACCAACAAGCTTGCTAGGTTGCGCAGCCAAGAGGATGAATGAACAATTTAGATCGTTAAATGCAGTTTCCATCATGCTTTGTAGTGAGATTTGTTTAATATATATCTTTT
TTGGTTCAAGAGATTTTGATATTTAATGACTACTGAATCTGAATTTTTAAACTGTCACTTCAACATTATAATTTCGAATTTTAAATTTTGAGATGTTTGAATTTTAAAGA
TGATTCCCTTATCATTGCATGGCTTGGTGGCGCGCTTCAGTTGGTCTGCCGTTTTGATATTTAAACCCAATTTTTTTGTAAATAAGATTTGGGGTAATATAAAGCTGGAA
TGAAGTGTATTTACTCCTAAGTTATTGGTTTATATGCTTGTTAATAAATTGATACTGAATTGACCACTTTTGCTTTCTTATTTATTTTTAATTGTTTTCTAAGTTTGGTC
AAGATAATTGTCTAATACCATGGTCAAGCCAGAATTCAAATTGTTACATCTTGGTTTCTAATTTAAACAGAGCTTCATAT
Protein sequenceShow/hide protein sequence
MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIV
ERAAQLDVVVTNKLARLRSQEDE