; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G008590 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G008590
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptioncold-regulated 413 inner membrane protein 1, chloroplastic-like
Genome locationchr02:8067692..8069896
RNA-Seq ExpressionLsi02G008590
SyntenyLsi02G008590
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008892 - Cold-regulated 413 protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147401.1 cold-regulated 413 inner membrane protein 2, chloroplastic [Cucumis sativus]3.0e-9787.34Show/hide
Query:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--
        MVCVSLSSAVSLY PS YKSKLSVPLSLRSS PNAKLS + AAK+SSICYNPL F VGSEG     INKK+SRGLSAVCYAMP+N RTLQW+STISSV  
Subjt:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--

Query:  ----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
            GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAAYLAFQHFSRAG
Subjt:  ----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVATVAVICVTAVSFLLVI
        SF+RAFDQNSIVATVAV+C+TAVSFL VI
Subjt:  SFRRAFDQNSIVATVAVICVTAVSFLLVI

XP_008443932.1 PREDICTED: cold-regulated 413 inner membrane protein 2, chloroplastic-like [Cucumis melo]1.7e-10089.08Show/hide
Query:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--
        MVCVSLSSAVSLY PS YKSKLSVPLSLRSS PNAKLS + AAK+SSICYNPL F VGSEGIATA INKK++RGLSA CYAMP+N RTLQWVSTISSV  
Subjt:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--

Query:  ----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
            GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAAYLAFQHFSRAG
Subjt:  ----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVATVAVICVTAVSFLLVI
        SF+RAFDQNSIVATVAVIC+TAVSFL VI
Subjt:  SFRRAFDQNSIVATVAVICVTAVSFLLVI

XP_022994881.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucurbita maxima]4.8e-9586.03Show/hide
Query:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--
        MVCV LSSA+SL+SP L+KSKLS PLSLRSS PNAKL+F+PAAK+SSIC NP+ F  GS+  +T AINKKR RGLSAVCYAMPL+AR LQW+STISSV  
Subjt:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--

Query:  ----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
            GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG+IISLLIAAYLAFQHFSRAG
Subjt:  ----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVATVAVICVTAVSFLLVI
        SFRRAFDQNSIVATVA+ICVTAVSFLLVI
Subjt:  SFRRAFDQNSIVATVAVICVTAVSFLLVI

XP_023542165.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like, partial [Cucurbita pepo subsp. pepo]1.3e-9584.98Show/hide
Query:  RKGEMVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTIS
        +KGE+VCV LSSA+SL+SP L KSKLS PLSLRSS PNAKL+F+PAAK+ SIC NP+ F  GS+  +T AINKKR RGLSAVCYAMPL+AR LQW+STIS
Subjt:  RKGEMVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTIS

Query:  SV------GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHF
        SV      GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG+IISLLIAAYLAFQHF
Subjt:  SV------GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHF

Query:  SRAGSFRRAFDQNSIVATVAVICVTAVSFLLVI
        SRAGSFRRAFDQNSIVATVA+ICVTAVSFLLVI
Subjt:  SRAGSFRRAFDQNSIVATVAVICVTAVSFLLVI

XP_038896035.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like [Benincasa hispida]1.8e-10289.96Show/hide
Query:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--
        MVCVSLSSAVSLY+PSLY+SKLSVPLSLRSS PNAKLSFSPAAK+SSICYNPL F VGSEGIATAAI KKRSRGLSA+CYAMP+NARTLQW+STISS   
Subjt:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--

Query:  ----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
            GTGIQKSFIVPLFAL APASV+SWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQ+LRGTQEG+IISL+IAAYLAFQHFSRAG
Subjt:  ----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVATVAVICVTAVSFLLVI
        SFRRAFDQNSIVATVAVIC TAVSFLLVI
Subjt:  SFRRAFDQNSIVATVAVICVTAVSFLLVI

TrEMBL top hitse value%identityAlignment
A0A0A0LXM7 Uncharacterized protein1.5e-9787.34Show/hide
Query:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--
        MVCVSLSSAVSLY PS YKSKLSVPLSLRSS PNAKLS + AAK+SSICYNPL F VGSEG     INKK+SRGLSAVCYAMP+N RTLQW+STISSV  
Subjt:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--

Query:  ----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
            GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAAYLAFQHFSRAG
Subjt:  ----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVATVAVICVTAVSFLLVI
        SF+RAFDQNSIVATVAV+C+TAVSFL VI
Subjt:  SFRRAFDQNSIVATVAVICVTAVSFLLVI

A0A1S3B961 cold-regulated 413 inner membrane protein 2, chloroplastic-like8.2e-10189.08Show/hide
Query:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--
        MVCVSLSSAVSLY PS YKSKLSVPLSLRSS PNAKLS + AAK+SSICYNPL F VGSEGIATA INKK++RGLSA CYAMP+N RTLQWVSTISSV  
Subjt:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--

Query:  ----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
            GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAAYLAFQHFSRAG
Subjt:  ----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVATVAVICVTAVSFLLVI
        SF+RAFDQNSIVATVAVIC+TAVSFL VI
Subjt:  SFRRAFDQNSIVATVAVICVTAVSFLLVI

A0A5D3DB21 Cold-regulated 413 inner membrane protein 28.2e-10189.08Show/hide
Query:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--
        MVCVSLSSAVSLY PS YKSKLSVPLSLRSS PNAKLS + AAK+SSICYNPL F VGSEGIATA INKK++RGLSA CYAMP+N RTLQWVSTISSV  
Subjt:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--

Query:  ----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
            GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAAYLAFQHFSRAG
Subjt:  ----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVATVAVICVTAVSFLLVI
        SF+RAFDQNSIVATVAVIC+TAVSFL VI
Subjt:  SFRRAFDQNSIVATVAVICVTAVSFLLVI

A0A6J1CH44 cold-regulated 413 inner membrane protein 1, chloroplastic-like3.9e-9584.28Show/hide
Query:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--
        MVC+SLSSA SL++ SLYK+KLS PLSLRS   +AKLS +PA KRSSICYNPL F VG+EGIATAAINK+RSRGL+ VCYAMPL AR +QW+STIS V  
Subjt:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--

Query:  ----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
            GTGIQKSFIVPLFALQAPASVISWIKGEYGIW+AFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAA+LAFQHFSRAG
Subjt:  ----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVATVAVICVTAVSFLLVI
        SFRRAFDQNSIVAT AV+CVTA SFLLVI
Subjt:  SFRRAFDQNSIVATVAVICVTAVSFLLVI

A0A6J1K0I6 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X22.3e-9586.03Show/hide
Query:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--
        MVCV LSSA+SL+SP L+KSKLS PLSLRSS PNAKL+F+PAAK+SSIC NP+ F  GS+  +T AINKKR RGLSAVCYAMPL+AR LQW+STISSV  
Subjt:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--

Query:  ----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
            GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG+IISLLIAAYLAFQHFSRAG
Subjt:  ----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVATVAVICVTAVSFLLVI
        SFRRAFDQNSIVATVA+ICVTAVSFLLVI
Subjt:  SFRRAFDQNSIVATVAVICVTAVSFLLVI

SwissProt top hitse value%identityAlignment
F4I1G5 Cold-regulated 413 inner membrane protein 2, chloroplastic5.9e-5655.41Show/hide
Query:  VCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIAT--AAINKKRSRGLSAVCYAMP-LNARTLQWVSTISSV
        +C+S S  V     SL+  K  + L LR    N           S +C+NPL  +   +  AT  A   K+R RG S VCYA P L+   LQW+STIS V
Subjt:  VCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIAT--AAINKKRSRGLSAVCYAMP-LNARTLQWVSTISSV

Query:  ------GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSR
              GTGI KSF+VPLFALQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG QEG+I+SL I+ +LAFQHFSR
Subjt:  ------GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSR

Query:  AGSFRRAFDQNSIVATVAVICVTAVSFLLVI
        AG+ ++AFDQNS++ATVA+I VT VSFL +I
Subjt:  AGSFRRAFDQNSIVATVAVICVTAVSFLLVI

O23164 Cold-regulated 413 plasma membrane protein 42.6e-1131.43Show/hide
Query:  LQWVSTISSV----------GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGS
        LQW ++I ++           T +  + +VP      P+ +  +  G++G W A +A++VRLFF    P  LEIP   +L+V+V+P  +   LR +  G+
Subjt:  LQWVSTISSV----------GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGS

Query:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAVICV
        +I L+IA YL  +H   +G F+ +F Q N I  T+ ++ +
Subjt:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAVICV

Q94AL8 Cold-regulated 413 inner membrane protein 1, chloroplastic7.8e-5652.61Show/hide
Query:  VCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAA--INKKRSRGLSAVCYAMPLNARTLQWVSTISSV-
        +C+S S  VSL+    +       LSL+  S  + LS       S +C+NPL  +   +  AT +  + K+R RG S VCYA P++A +LQW+STIS + 
Subjt:  VCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAA--INKKRSRGLSAVCYAMPLNARTLQWVSTISSV-

Query:  -----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRA
             GTGI KS +VPLFAL AP+S+++WIKGEYG+W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG QEG+II++ I+ +LAFQHFSRA
Subjt:  -----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRA

Query:  GSFRRAFDQNSIVATVAVICVTAVSFLLVI
        GS  +A+++ S++ATVA+I VT VS LL++
Subjt:  GSFRRAFDQNSIVATVAVICVTAVSFLLVI

Q9SVL6 Cold-regulated 413 plasma membrane protein 24.0e-1236.79Show/hide
Query:  TGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGSIISLLIAAYLAFQHFSRAGSF
        T +  S ++P   L  P+ + +++ G+ G W AF+A+++RLFF    P  LE+P   +LL++V+P +   ++RGT  G++ISL I  YL  +H   +G F
Subjt:  TGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGSIISLLIAAYLAFQHFSRAGSF

Query:  RRAFDQ
        R +F Q
Subjt:  RRAFDQ

Q9XIM7 Cold-regulated 413 plasma membrane protein 18.4e-1032.86Show/hide
Query:  LQWVSTISSV----------GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGS
        L+WV++I+++           T +  S ++P      P+ +    +GE G W AF+A++V+LFF       LE+P   +LL +VAP  +    R +  G 
Subjt:  LQWVSTISSV----------GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGS

Query:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAVICV
         I L I  YL  +H   +G FR AF + N I  TV +IC+
Subjt:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAVICV

Arabidopsis top hitse value%identityAlignment
AT1G29390.1 cold regulated 314 thylakoid membrane 24.2e-5755.41Show/hide
Query:  VCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIAT--AAINKKRSRGLSAVCYAMP-LNARTLQWVSTISSV
        +C+S S  V     SL+  K  + L LR    N           S +C+NPL  +   +  AT  A   K+R RG S VCYA P L+   LQW+STIS V
Subjt:  VCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIAT--AAINKKRSRGLSAVCYAMP-LNARTLQWVSTISSV

Query:  ------GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSR
              GTGI KSF+VPLFALQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG QEG+I+SL I+ +LAFQHFSR
Subjt:  ------GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSR

Query:  AGSFRRAFDQNSIVATVAVICVTAVSFLLVI
        AG+ ++AFDQNS++ATVA+I VT VSFL +I
Subjt:  AGSFRRAFDQNSIVATVAVICVTAVSFLLVI

AT1G29390.2 cold regulated 314 thylakoid membrane 21.5e-5465.87Show/hide
Query:  TAAINKKRSRGLSAVCYAMP-LNARTLQWVSTISSV------GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLL
        +A   K+R RG S VCYA P L+   LQW+STIS V      GTGI KSF+VPLFALQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LL
Subjt:  TAAINKKRSRGLSAVCYAMP-LNARTLQWVSTISSV------GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLL

Query:  LVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICVTAVSFLLVI
        LVIVAPYQV ++RG QEG+I+SL I+ +LAFQHFSRAG+ ++AFDQNS++ATVA+I VT VSFL +I
Subjt:  LVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICVTAVSFLLVI

AT1G29395.1 COLD REGULATED 314 INNER MEMBRANE 15.5e-5752.61Show/hide
Query:  VCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAA--INKKRSRGLSAVCYAMPLNARTLQWVSTISSV-
        +C+S S  VSL+    +       LSL+  S  + LS       S +C+NPL  +   +  AT +  + K+R RG S VCYA P++A +LQW+STIS + 
Subjt:  VCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAA--INKKRSRGLSAVCYAMPLNARTLQWVSTISSV-

Query:  -----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRA
             GTGI KS +VPLFAL AP+S+++WIKGEYG+W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG QEG+II++ I+ +LAFQHFSRA
Subjt:  -----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRA

Query:  GSFRRAFDQNSIVATVAVICVTAVSFLLVI
        GS  +A+++ S++ATVA+I VT VS LL++
Subjt:  GSFRRAFDQNSIVATVAVICVTAVSFLLVI

AT3G50830.1 cold-regulated 413-plasma membrane 22.9e-1336.79Show/hide
Query:  TGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGSIISLLIAAYLAFQHFSRAGSF
        T +  S ++P   L  P+ + +++ G+ G W AF+A+++RLFF    P  LE+P   +LL++V+P +   ++RGT  G++ISL I  YL  +H   +G F
Subjt:  TGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGSIISLLIAAYLAFQHFSRAGSF

Query:  RRAFDQ
        R +F Q
Subjt:  RRAFDQ

AT4G37220.1 Cold acclimation protein WCOR413 family1.9e-1231.43Show/hide
Query:  LQWVSTISSV----------GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGS
        LQW ++I ++           T +  + +VP      P+ +  +  G++G W A +A++VRLFF    P  LEIP   +L+V+V+P  +   LR +  G+
Subjt:  LQWVSTISSV----------GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGS

Query:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAVICV
        +I L+IA YL  +H   +G F+ +F Q N I  T+ ++ +
Subjt:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAVICV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCGGCTCCGGTTTTTTCACGTTCATCAGTTGGGCGAGCGACAGTTTGCTTGTTGAATCAAAACTAGAAAATCGACAGCATCGTTTTCAAATTCCAGTCCAAAT
CCGAGAGAAGATAGAGGCTGAACCAGGCAAAGGAAGAAAGGGGGAAATGGTTTGTGTATCTTTATCTTCTGCTGTTTCACTTTACAGTCCCTCTCTCTACAAATCCAAGC
TCTCCGTTCCTCTCTCTCTAAGATCTTCATCGCCGAATGCAAAGCTCTCGTTCAGTCCTGCTGCTAAACGGAGTTCCATCTGTTACAATCCGCTCATGTTTACTGTCGGT
AGCGAGGGGATTGCGACGGCGGCGATTAACAAGAAGAGGAGCCGTGGTTTAAGTGCTGTTTGTTACGCTATGCCTCTTAACGCTCGCACTCTTCAGTGGGTCTCCACCAT
TTCTTCTGTGGGGACTGGGATTCAGAAGTCATTTATTGTTCCGCTATTTGCTCTTCAGGCACCTGCAAGTGTTATCTCCTGGATTAAAGGAGAATATGGCATTTGGAGCG
CTTTTCTGGCACTTCTTGTTCGACTGTTCTTCTTCATCCCTGGTGAATTGGAGATACCATTCATATCATTACTTTTGGTGATTGTTGCCCCATATCAAGTCCAAAATTTA
AGAGGAACTCAAGAAGGGAGCATTATCTCCCTACTTATTGCAGCATATTTGGCCTTCCAGCATTTCTCTCGAGCAGGCAGCTTTCGGAGAGCTTTTGACCAGAATTCAAT
TGTTGCAACAGTAGCAGTCATTTGTGTTACTGCTGTCTCATTCCTGCTCGTGATCTGA
mRNA sequenceShow/hide mRNA sequence
ATTACTTTCATCTCGGTTTTGGAGATGGCAGCCGGCTCCGGTTTTTTCACGTTCATCAGTTGGGCGAGCGACAGTTTGCTTGTTGAATCAAAACTAGAAAATCGACAGCA
TCGTTTTCAAATTCCAGTCCAAATCCGAGAGAAGATAGAGGCTGAACCAGGCAAAGGAAGAAAGGGGGAAATGGTTTGTGTATCTTTATCTTCTGCTGTTTCACTTTACA
GTCCCTCTCTCTACAAATCCAAGCTCTCCGTTCCTCTCTCTCTAAGATCTTCATCGCCGAATGCAAAGCTCTCGTTCAGTCCTGCTGCTAAACGGAGTTCCATCTGTTAC
AATCCGCTCATGTTTACTGTCGGTAGCGAGGGGATTGCGACGGCGGCGATTAACAAGAAGAGGAGCCGTGGTTTAAGTGCTGTTTGTTACGCTATGCCTCTTAACGCTCG
CACTCTTCAGTGGGTCTCCACCATTTCTTCTGTGGGGACTGGGATTCAGAAGTCATTTATTGTTCCGCTATTTGCTCTTCAGGCACCTGCAAGTGTTATCTCCTGGATTA
AAGGAGAATATGGCATTTGGAGCGCTTTTCTGGCACTTCTTGTTCGACTGTTCTTCTTCATCCCTGGTGAATTGGAGATACCATTCATATCATTACTTTTGGTGATTGTT
GCCCCATATCAAGTCCAAAATTTAAGAGGAACTCAAGAAGGGAGCATTATCTCCCTACTTATTGCAGCATATTTGGCCTTCCAGCATTTCTCTCGAGCAGGCAGCTTTCG
GAGAGCTTTTGACCAGAATTCAATTGTTGCAACAGTAGCAGTCATTTGTGTTACTGCTGTCTCATTCCTGCTCGTGATCTGAGTTCCATAGTCACTCCCATGTAAACCTT
ATCAGTTAAATCTTCAATAGACACTATTGGTCGTCCTGTAATAGTTACACAATAGTCAGAATGTACAGACCTTTCCTTTTTCTGTTTATAAATGCTATAAAGATTTTTTC
CTTTCTCCTTGCTTGCTTGATCTCAATCATCCTCCTCTGTCTCATTTTAGTTATCACAAAATTGCATTGGATCGAACCTAGGCAATTGTTCGTTACCTTTTTAAATAACA
TTGGTCCTACTAGTTATATATGCCAGTTTGTGAACTCGC
Protein sequenceShow/hide protein sequence
MAAGSGFFTFISWASDSLLVESKLENRQHRFQIPVQIREKIEAEPGKGRKGEMVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVG
SEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSVGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNL
RGTQEGSIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICVTAVSFLLVI