; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G008770 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G008770
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr02:8299553..8301932
RNA-Seq ExpressionLsi02G008770
SyntenyLsi02G008770
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN65550.1 hypothetical protein Csa_019856 [Cucumis sativus]2.2e-10484.72Show/hide
Query:  PLP-PPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQSPPSPPKSEPN
        PLP PP +SLHSNFFSSLKQVEKRLKLDH SQ+DVLHPPPP PV T+SSS+ E+SLSTP+YLHFPQTNTSS +QESS+ PLEF+SSSSQSPPS PKSE N
Subjt:  PLP-PPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQSPPSPPKSEPN

Query:  PPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPLRLAYLLLGKAV
        PP PIDR QN+ VDDIQRLIQLLGL DSCDEKE GAK+GC+GCEGCE GFYSKIVGLKGPKCR EVERLNGWI+FF NGG EE+RLEPLRLAYLLLGKAV
Subjt:  PPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPLRLAYLLLGKAV

Query:  FASNGGDGCLEGLEFPSTVEDFLLNDPPA
        FASN  DGCLEGLEFPSTVEDFLLNDPPA
Subjt:  FASNGGDGCLEGLEFPSTVEDFLLNDPPA

XP_004147438.2 uncharacterized protein LOC101217056 [Cucumis sativus]1.5e-10582.57Show/hide
Query:  MGEKMEPPSPPPPLP-PPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFISSSS
        MGEKM       PLP PP +SLHSNFFSSLKQVEKRLKLDH SQ+DVLHPPPP PV T+SSS+ E+SLSTP+YLHFPQTNTSS +QESS+ PLEF+SSSS
Subjt:  MGEKMEPPSPPPPLP-PPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFISSSS

Query:  QSPPSPPKSEPNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEP
        QSPPS PKSE NPP PIDR QN+ VDDIQRLIQLLGL DSCDEKE GAK+GC+GCEGCE GFYSKIVGLKGPKCR EVERLNGWI+FF NGG EE+RLEP
Subjt:  QSPPSPPKSEPNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEP

Query:  LRLAYLLLGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA
        LRLAYLLLGKAVFASN  DGCLEGLEFPSTVEDFLLNDPPA
Subjt:  LRLAYLLLGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA

XP_008444181.1 PREDICTED: uncharacterized protein LOC103487596 [Cucumis melo]1.7e-10481.33Show/hide
Query:  MGEKMEPPSPPPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEES-LSTPLYLHFPQTNTSSAIQESSEPPLEFISSSS
        MGEKM+PP P    PPP +SLHS+FFSSLKQVEKRLKLDH SQ+DVLHPPPP PV T++SSS EE  LSTP+YLHFPQTNTSS +QESS+PPLEF+S+ S
Subjt:  MGEKMEPPSPPPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEES-LSTPLYLHFPQTNTSSAIQESSEPPLEFISSSS

Query:  QSPPSPPKSEPNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEP
         SPPS PKS  NPPN IDR QN+ +DDIQRLIQLLGL DSCDEKELG K GC+GCEGCE GFYSKIVGLKGPKCR EVERLNGWI+FF NGGGEE+RLEP
Subjt:  QSPPSPPKSEPNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEP

Query:  LRLAYLLLGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA
        LRLAYLLLGKAVFASNG DGCL+GLEFPSTVEDFLLNDPPA
Subjt:  LRLAYLLLGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA

XP_023519908.1 uncharacterized protein LOC111783234 [Cucurbita pepo subsp. pepo]4.5e-9775.92Show/hide
Query:  MGEKMEPPSPPPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPP-----PPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFI
        MGEKM PP PPPP PPPS+SLHS+FFSSLKQVEKRLKLD+PSQ+D L PP     P  PV   SSSSAEES+STP+YLH PQTNT+S++QESSEPP EF+
Subjt:  MGEKMEPPSPPPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPP-----PPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFI

Query:  SSSSQSPPSPPKSEPNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEE
        S+SS       KSE N PN ID  Q++ VDDIQRL+QLLGLGDS +E+ELGA+SGC+GCEGCE GFYSKIVGLKGPKC  E ERLNGWI++ WNGGGE E
Subjt:  SSSSQSPPSPPKSEPNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEE

Query:  RLEPLRLAYLLLGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA
        RLEPLRLAYLL+GKAVFASNGGD CLEGLEFPSTVEDFLLNDPPA
Subjt:  RLEPLRLAYLLLGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA

XP_038895328.1 uncharacterized protein LOC120083579 [Benincasa hispida]3.4e-10583.05Show/hide
Query:  MEPPSPPPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQSPPS
        M+PP P    PPPSVSLHSNFFSSLKQVEKRLKLDH SQ+DVLHPPP FPV T+SSSS E+SLSTP+YLHFPQTNT SA+QESSEPPLEF+S+SSQSPPS
Subjt:  MEPPSPPPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQSPPS

Query:  PPKSEPNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPLRLAY
         PKSE NP   IDR QN  V DIQRLIQLLGLG+SCDE ELGAK+GC+GCEGCE GFYSKIVGLKGPKC+ EVERLNGWI+FF NGGGEEERLEPLRLAY
Subjt:  PPKSEPNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPLRLAY

Query:  LLLGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA
        LL GK+VFASNG DGCLEG+EFPSTVEDFLLNDPPA
Subjt:  LLLGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA

TrEMBL top hitse value%identityAlignment
A0A0A0LUG6 Uncharacterized protein1.1e-10484.72Show/hide
Query:  PLP-PPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQSPPSPPKSEPN
        PLP PP +SLHSNFFSSLKQVEKRLKLDH SQ+DVLHPPPP PV T+SSS+ E+SLSTP+YLHFPQTNTSS +QESS+ PLEF+SSSSQSPPS PKSE N
Subjt:  PLP-PPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQSPPSPPKSEPN

Query:  PPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPLRLAYLLLGKAV
        PP PIDR QN+ VDDIQRLIQLLGL DSCDEKE GAK+GC+GCEGCE GFYSKIVGLKGPKCR EVERLNGWI+FF NGG EE+RLEPLRLAYLLLGKAV
Subjt:  PPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPLRLAYLLLGKAV

Query:  FASNGGDGCLEGLEFPSTVEDFLLNDPPA
        FASN  DGCLEGLEFPSTVEDFLLNDPPA
Subjt:  FASNGGDGCLEGLEFPSTVEDFLLNDPPA

A0A1S3B9V1 uncharacterized protein LOC1034875968.2e-10581.33Show/hide
Query:  MGEKMEPPSPPPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEES-LSTPLYLHFPQTNTSSAIQESSEPPLEFISSSS
        MGEKM+PP P    PPP +SLHS+FFSSLKQVEKRLKLDH SQ+DVLHPPPP PV T++SSS EE  LSTP+YLHFPQTNTSS +QESS+PPLEF+S+ S
Subjt:  MGEKMEPPSPPPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEES-LSTPLYLHFPQTNTSSAIQESSEPPLEFISSSS

Query:  QSPPSPPKSEPNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEP
         SPPS PKS  NPPN IDR QN+ +DDIQRLIQLLGL DSCDEKELG K GC+GCEGCE GFYSKIVGLKGPKCR EVERLNGWI+FF NGGGEE+RLEP
Subjt:  QSPPSPPKSEPNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEP

Query:  LRLAYLLLGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA
        LRLAYLLLGKAVFASNG DGCL+GLEFPSTVEDFLLNDPPA
Subjt:  LRLAYLLLGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA

A0A5A7UHE6 Uncharacterized protein8.2e-10581.33Show/hide
Query:  MGEKMEPPSPPPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEES-LSTPLYLHFPQTNTSSAIQESSEPPLEFISSSS
        MGEKM+PP P    PPP +SLHS+FFSSLKQVEKRLKLDH SQ+DVLHPPPP PV T++SSS EE  LSTP+YLHFPQTNTSS +QESS+PPLEF+S+ S
Subjt:  MGEKMEPPSPPPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEES-LSTPLYLHFPQTNTSSAIQESSEPPLEFISSSS

Query:  QSPPSPPKSEPNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEP
         SPPS PKS  NPPN IDR QN+ +DDIQRLIQLLGL DSCDEKELG K GC+GCEGCE GFYSKIVGLKGPKCR EVERLNGWI+FF NGGGEE+RLEP
Subjt:  QSPPSPPKSEPNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEP

Query:  LRLAYLLLGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA
        LRLAYLLLGKAVFASNG DGCL+GLEFPSTVEDFLLNDPPA
Subjt:  LRLAYLLLGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA

A0A6J1END4 uncharacterized protein LOC1114341551.0e-9475.1Show/hide
Query:  MGEKMEPPSPPPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPP-----PPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFI
        MGEKM PP PP   P PS+SLHS+FFSSLKQVEKRLKLD+PSQ+D L PP     P  PV   SSSS EESLSTP+YLH PQTNT+S++QESSEPP EF+
Subjt:  MGEKMEPPSPPPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPP-----PPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFI

Query:  SSSSQSPPSPPKSEPNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEE
        S+SS       KSE N PN ID  QN+ VDDIQRL+QLLGLGDS +E+ELGA+SGC+GCEGCE GFYSKIVGLKGPKC  EVERLNGWI +FW GGGE E
Subjt:  SSSSQSPPSPPKSEPNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEE

Query:  RLEPLRLAYLLLGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA
        RLEPLRLAYLL+GKAVFASNG D CLEGLEFPSTVEDFLLNDPPA
Subjt:  RLEPLRLAYLLLGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA

A0A6J1KGL6 uncharacterized protein LOC1114955906.9e-9675.51Show/hide
Query:  MGEKMEPPSPPPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPP-----PPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFI
        MGEKM PP PP   PPPS+SLHS+FFSSLKQVEKRLKLD+PSQ+D L PP     P  PV   SSSS EESLSTP+YLH  QTNT+S++QESSEPP EF+
Subjt:  MGEKMEPPSPPPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPP-----PPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFI

Query:  SSSSQSPPSPPKSEPNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEE
        S+SS       KSE N PN ID  QN+ VDDIQRL+QLLG GDS +EKELGA+SGC+GCEGCE GFYSKIVGLKGPKC  EVERLNGWI++FW GGGE E
Subjt:  SSSSQSPPSPPKSEPNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEE

Query:  RLEPLRLAYLLLGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA
        RLEPLRLAYLL+GKAVFASNGGD CLEGLEFPSTVEDFLLNDPPA
Subjt:  RLEPLRLAYLLLGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAAAAAATGGAGCCACCGTCGCCACCGCCACCGCTACCGCCGCCGTCTGTATCTCTTCACTCCAATTTCTTTTCCTCTCTAAAGCAGGTCGAAAAGCGCCTAAA
ATTAGACCATCCATCGCAGCAGGACGTTCTTCATCCACCGCCGCCATTTCCAGTAGCAACCCATTCTTCTTCATCGGCCGAAGAGTCACTGAGCACTCCCCTGTACCTTC
ATTTCCCCCAAACCAACACAAGCTCCGCCATACAAGAAAGCAGCGAACCACCACTGGAATTCATCTCAAGTTCCTCCCAATCTCCACCATCCCCTCCAAAATCAGAACCG
AATCCTCCGAATCCCATCGATCGTGACCAAAATCAGGCTGTAGACGACATTCAACGGCTAATTCAACTGCTAGGGTTAGGAGATTCGTGTGACGAAAAGGAATTAGGAGC
TAAGAGTGGCTGTGATGGCTGTGAGGGTTGTGAAGGCGGGTTTTACAGTAAGATCGTTGGCCTGAAAGGCCCCAAATGTAGAATGGAGGTGGAGAGGCTAAATGGATGGA
TTAAGTTCTTTTGGAATGGTGGTGGTGAAGAAGAGAGATTAGAGCCTCTTAGATTGGCATATTTACTGTTAGGGAAAGCTGTTTTTGCTTCTAATGGGGGTGATGGGTGT
TTGGAAGGATTGGAATTCCCTTCAACTGTAGAGGATTTCTTGCTGAATGATCCTCCTGCATAA
mRNA sequenceShow/hide mRNA sequence
CGCCAAACTTTCTTCGACATCTTTGCCTCTTGAGTCATCCGAGTCACTGCCGCACCTTCATGGGTGAAAAAATGGAGCCACCGTCGCCACCGCCACCGCTACCGCCGCCG
TCTGTATCTCTTCACTCCAATTTCTTTTCCTCTCTAAAGCAGGTCGAAAAGCGCCTAAAATTAGACCATCCATCGCAGCAGGACGTTCTTCATCCACCGCCGCCATTTCC
AGTAGCAACCCATTCTTCTTCATCGGCCGAAGAGTCACTGAGCACTCCCCTGTACCTTCATTTCCCCCAAACCAACACAAGCTCCGCCATACAAGAAAGCAGCGAACCAC
CACTGGAATTCATCTCAAGTTCCTCCCAATCTCCACCATCCCCTCCAAAATCAGAACCGAATCCTCCGAATCCCATCGATCGTGACCAAAATCAGGCTGTAGACGACATT
CAACGGCTAATTCAACTGCTAGGGTTAGGAGATTCGTGTGACGAAAAGGAATTAGGAGCTAAGAGTGGCTGTGATGGCTGTGAGGGTTGTGAAGGCGGGTTTTACAGTAA
GATCGTTGGCCTGAAAGGCCCCAAATGTAGAATGGAGGTGGAGAGGCTAAATGGATGGATTAAGTTCTTTTGGAATGGTGGTGGTGAAGAAGAGAGATTAGAGCCTCTTA
GATTGGCATATTTACTGTTAGGGAAAGCTGTTTTTGCTTCTAATGGGGGTGATGGGTGTTTGGAAGGATTGGAATTCCCTTCAACTGTAGAGGATTTCTTGCTGAATGAT
CCTCCTGCATAATAGGAAAATGGGAAGACATGGCTGAAAAATTCTGGTTTCAACTGACATGAAGTCATGAACAAGCTGCAACGCCAGAGCTCAAGAAGAATCACTTCAAC
CAAAAGCATGTTAACTGTCACTTGAAGGTCAGGACAAACACTAGTTGCTAAAGCAGAGGAACATTTGGTTTTGGTTGGGCCCAAAGGTGCCTTAAAGAGAAGAGAAAAAA
TGGTTTGAATCGAACTGATTGGGAAGCTGAATTTAGATGTATAAATGTTCTTGGTGGCCAATCTTCATAATCTTGTGTCTTTGTAGGTTTAAATGTATGGAACTCATGAA
ATAATTCAAACTAAGTCTAATCGAATCCAACCAGTTTAGTTTGGATTTCCACTGATTTGGTTTAGTAAACCAAAAAAAAATTAGAAAATGACAGCTGTGGGATTTGAACC
CACGCCCTTTCGGACCAGAGCCTAAATCTGGCGCCTTAGACCACTCGGCCAAACTGTCAAAGTTTGATTAATTGTCTCTTATTGTTTCTTTTTTTTTAAAAAAAACAAAA
ATTGATTTTTATTTTACTTTTTAGTTTAGATCAAGAACTAATTCCTCGACAAGATTAGTCAATTTTCT
Protein sequenceShow/hide protein sequence
MGEKMEPPSPPPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQSPPSPPKSEP
NPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPLRLAYLLLGKAVFASNGGDGC
LEGLEFPSTVEDFLLNDPPA