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Lsi02G008870 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G008870
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:8378388..8380150
RNA-Seq ExpressionLsi02G008870
SyntenyLsi02G008870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573361.1 hypothetical protein SDJN03_27248, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1247.66Show/hide
Query:  LESISLLRGGSIPKLPL--NAPSFTILTMASWLQFDLKNKAPFSRLSNGS----TSIGSIWNLNTRNKLLAYCRNVYGWEAYSDAIEDPLKSLLSL----
        +ES +L RGG   KLPL   +PS  +  M SWL F+++N  PF RLSNGS     SIGS  N N R+KLLA C +    E YS+A ED LK+L+SL    
Subjt:  LESISLLRGGSIPKLPL--NAPSFTILTMASWLQFDLKNKAPFSRLSNGS----TSIGSIWNLNTRNKLLAYCRNVYGWEAYSDAIEDPLKSLLSL----

Query:  -------------SEALKLVVDEKYEEA
                     +EALKLVV+EKY EA
Subjt:  -------------SEALKLVVDEKYEEA

KAG7012525.1 hypothetical protein SDJN02_25277, partial [Cucurbita argyrosperma subsp. argyrosperma]5.5e-1348.44Show/hide
Query:  LESISLLRGGSIPKLPL--NAPSFTILTMASWLQFDLKNKAPFSRLSNGS----TSIGSIWNLNTRNKLLAYCRNVYGWEAYSDAIEDPLKSLLSL----
        +ES +LLRGG   KLPL   +PS  +  M SWL F+++N  PF RLSNGS     SIGS  N N R+KLLA C +    E YS+A ED LK+L+SL    
Subjt:  LESISLLRGGSIPKLPL--NAPSFTILTMASWLQFDLKNKAPFSRLSNGS----TSIGSIWNLNTRNKLLAYCRNVYGWEAYSDAIEDPLKSLLSL----

Query:  -------------SEALKLVVDEKYEEA
                     +EALKLVV+EKY EA
Subjt:  -------------SEALKLVVDEKYEEA

XP_004151209.2 uncharacterized protein LOC101223225 [Cucumis sativus]4.9e-2258.27Show/hide
Query:  LESISLLRGGSIPKLPLNAPSFTILTM-ASWLQFDLKNKAPFSRLSNGST---SIGSIWNLNTRNKLLAYCRNVYGWEAYSDA-IEDPLKSLLSL-----
        +ESI LL   SIPKLP NAPSFTI +M +SWL F+L+N  PFS+LSN ST   SIGSI +LNT N+LL  C NV+G EA+SDA  +DPLKSLLSL     
Subjt:  LESISLLRGGSIPKLPLNAPSFTILTM-ASWLQFDLKNKAPFSRLSNGST---SIGSIWNLNTRNKLLAYCRNVYGWEAYSDA-IEDPLKSLLSL-----

Query:  ------------SEALKLVVDEKYEEA
                    SEALKLV+D KY EA
Subjt:  ------------SEALKLVVDEKYEEA

XP_008444305.1 PREDICTED: uncharacterized protein LOC103487673 [Cucumis melo]1.1e-2156.25Show/hide
Query:  LESISLLRGGSIPKLPLNAPSFTILTMAS--WLQFDLKNKAPFSRLSNGST---SIGSIWNLNTRNKLLAYCRNVYGWEAYSDAI-EDPLKSLLSL----
        +ESI L R  SIPKLP +APSFTI +M+S  WL F+L+N  PFS+LSN ST   +IGSI +LNT NKL+A C NV G EA+SD+I ++PLKSLLSL    
Subjt:  LESISLLRGGSIPKLPLNAPSFTILTMAS--WLQFDLKNKAPFSRLSNGST---SIGSIWNLNTRNKLLAYCRNVYGWEAYSDAI-EDPLKSLLSL----

Query:  -------------SEALKLVVDEKYEEA
                     SEALKLV+D KY EA
Subjt:  -------------SEALKLVVDEKYEEA

XP_023542161.1 uncharacterized protein LOC111802127 [Cucurbita pepo subsp. pepo]2.1e-1247.66Show/hide
Query:  LESISLLRGGSIPKLPL--NAPSFTILTMASWLQFDLKNKAPFSRLSNGS----TSIGSIWNLNTRNKLLAYCRNVYGWEAYSDAIEDPLKSLLSL----
        +ES +LLRGG   KLPL   +PS  +  M SWL+F+++ K+   RLSNGS     SIGS WN N R+KLLA C +    E YS+A  D LKSLLSL    
Subjt:  LESISLLRGGSIPKLPL--NAPSFTILTMASWLQFDLKNKAPFSRLSNGS----TSIGSIWNLNTRNKLLAYCRNVYGWEAYSDAIEDPLKSLLSL----

Query:  -------------SEALKLVVDEKYEEA
                     +EALKLVV+ KY EA
Subjt:  -------------SEALKLVVDEKYEEA

TrEMBL top hitse value%identityAlignment
A0A0A0LUX5 Uncharacterized protein2.4e-2258.27Show/hide
Query:  LESISLLRGGSIPKLPLNAPSFTILTM-ASWLQFDLKNKAPFSRLSNGST---SIGSIWNLNTRNKLLAYCRNVYGWEAYSDA-IEDPLKSLLSL-----
        +ESI LL   SIPKLP NAPSFTI +M +SWL F+L+N  PFS+LSN ST   SIGSI +LNT N+LL  C NV+G EA+SDA  +DPLKSLLSL     
Subjt:  LESISLLRGGSIPKLPLNAPSFTILTM-ASWLQFDLKNKAPFSRLSNGST---SIGSIWNLNTRNKLLAYCRNVYGWEAYSDA-IEDPLKSLLSL-----

Query:  ------------SEALKLVVDEKYEEA
                    SEALKLV+D KY EA
Subjt:  ------------SEALKLVVDEKYEEA

A0A1S3BA48 uncharacterized protein LOC1034876735.3e-2256.25Show/hide
Query:  LESISLLRGGSIPKLPLNAPSFTILTMAS--WLQFDLKNKAPFSRLSNGST---SIGSIWNLNTRNKLLAYCRNVYGWEAYSDAI-EDPLKSLLSL----
        +ESI L R  SIPKLP +APSFTI +M+S  WL F+L+N  PFS+LSN ST   +IGSI +LNT NKL+A C NV G EA+SD+I ++PLKSLLSL    
Subjt:  LESISLLRGGSIPKLPLNAPSFTILTMAS--WLQFDLKNKAPFSRLSNGST---SIGSIWNLNTRNKLLAYCRNVYGWEAYSDAI-EDPLKSLLSL----

Query:  -------------SEALKLVVDEKYEEA
                     SEALKLV+D KY EA
Subjt:  -------------SEALKLVVDEKYEEA

A0A6J1GT93 uncharacterized protein LOC111457322 isoform X11.2e-1046.09Show/hide
Query:  LESISLLRGGSIPKLPL--NAPSFTILTMASWLQFDLKNKAPFSRLSNGS----TSIGSIWNLNTRNKLLAYCRNVYGWEAYSDAIEDPLKSLLSL----
        +ES +LLRGG   KLPL   +PS  +  M SWL F+++N  PF RLSNGS     SIG   N N  +KLLA C +      YS+A ED LK+LLSL    
Subjt:  LESISLLRGGSIPKLPL--NAPSFTILTMASWLQFDLKNKAPFSRLSNGS----TSIGSIWNLNTRNKLLAYCRNVYGWEAYSDAIEDPLKSLLSL----

Query:  -------------SEALKLVVDEKYEEA
                     +EALKLVV+ KY EA
Subjt:  -------------SEALKLVVDEKYEEA

A0A6J1GVX9 uncharacterized protein LOC111457322 isoform X21.2e-1046.09Show/hide
Query:  LESISLLRGGSIPKLPL--NAPSFTILTMASWLQFDLKNKAPFSRLSNGS----TSIGSIWNLNTRNKLLAYCRNVYGWEAYSDAIEDPLKSLLSL----
        +ES +LLRGG   KLPL   +PS  +  M SWL F+++N  PF RLSNGS     SIG   N N  +KLLA C +      YS+A ED LK+LLSL    
Subjt:  LESISLLRGGSIPKLPL--NAPSFTILTMASWLQFDLKNKAPFSRLSNGS----TSIGSIWNLNTRNKLLAYCRNVYGWEAYSDAIEDPLKSLLSL----

Query:  -------------SEALKLVVDEKYEEA
                     +EALKLVV+ KY EA
Subjt:  -------------SEALKLVVDEKYEEA

A0A6J1K442 uncharacterized protein LOC1114904751.3e-1247.24Show/hide
Query:  LESISLLRGGSIPKLPL--NAPSFTILTMASWLQFDLKNKAPFSRLSNG----STSIGSIWNLNTRNKLLAYCRNVYGWEAYSDAIEDPLKSLLSL----
        +ES +LL GG   KLPL   +PS  +  + SWL F+++N  PFSRLSNG      SI S WN NTR+ LLA C +    E YS+A ED LK+LLSL    
Subjt:  LESISLLRGGSIPKLPL--NAPSFTILTMASWLQFDLKNKAPFSRLSNG----STSIGSIWNLNTRNKLLAYCRNVYGWEAYSDAIEDPLKSLLSL----

Query:  -------------SEALKLVVDEKYEE
                     +EALKLVV+EKY E
Subjt:  -------------SEALKLVVDEKYEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGGTACAATCTCCATATCATTGGAATCCATTTCTTTGCTTCGTGGTGGCTCGATACCTAAACTTCCCTTGAATGCACCATCCTTTACTATTTTGACGATGGCTTC
CTGGCTCCAATTCGATCTTAAAAACAAGGCACCATTTTCTAGACTCTCCAATGGTTCGACCTCTATTGGTTCGATTTGGAATTTGAATACACGCAACAAATTATTAGCTT
ATTGTAGAAATGTGTATGGTTGGGAGGCATACTCGGATGCTATAGAAGACCCATTGAAGTCATTACTAAGCTTAAGTGAGGCACTGAAGTTGGTGGTGGACGAGAAGTAC
GAGGAAGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATAGGTACAATCTCCATATCATTGGAATCCATTTCTTTGCTTCGTGGTGGCTCGATACCTAAACTTCCCTTGAATGCACCATCCTTTACTATTTTGACGATGGCTTC
CTGGCTCCAATTCGATCTTAAAAACAAGGCACCATTTTCTAGACTCTCCAATGGTTCGACCTCTATTGGTTCGATTTGGAATTTGAATACACGCAACAAATTATTAGCTT
ATTGTAGAAATGTGTATGGTTGGGAGGCATACTCGGATGCTATAGAAGACCCATTGAAGTCATTACTAAGCTTAAGTGAGGCACTGAAGTTGGTGGTGGACGAGAAGTAC
GAGGAAGCGTAG
Protein sequenceShow/hide protein sequence
MIGTISISLESISLLRGGSIPKLPLNAPSFTILTMASWLQFDLKNKAPFSRLSNGSTSIGSIWNLNTRNKLLAYCRNVYGWEAYSDAIEDPLKSLLSLSEALKLVVDEKY
EEA