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Lsi02G008880 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G008880
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:8397110..8400676
RNA-Seq ExpressionLsi02G008880
SyntenyLsi02G008880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053978.1 uncharacterized protein E6C27_scaffold318G00220 [Cucumis melo var. makuwa]1.9e-1349.28Show/hide
Query:  MDSTAFLRRGFSPAP-PLLPTT-ASVAGR--LP-LTFRCNVSSIRLLVEKSNK--IENYNKHRSCNKNNNG-IDIRCAQWAKSSSSSQDGDNFPYANAKG
        MDSTA L RGFS AP P LPTT  SVAGR  LP LTFRCNVSS+ LLV+KSN   I  Y    +   NNNG IDI+C + ++     +D  NFP  NA+ 
Subjt:  MDSTAFLRRGFSPAP-PLLPTT-ASVAGR--LP-LTFRCNVSSIRLLVEKSNK--IENYNKHRSCNKNNNG-IDIRCAQWAKSSSSSQDGDNFPYANAKG

Query:  ALQSLLAGLFSFDTPTGDSKIIVAEKAIVYTLLSDESN
        ALQSLL      DT   D+  I   K   ++ L+   N
Subjt:  ALQSLLAGLFSFDTPTGDSKIIVAEKAIVYTLLSDESN

XP_004151210.2 uncharacterized protein LOC101202955 [Cucumis sativus]3.1e-1143.92Show/hide
Query:  MDSTAFLRRGFS--PAPPLLPTTASVAGRLPL---TFRCN--VSSIRLLVEKSNKIENYN-KHRSCNKNNNGIDIRCAQWAKS-SSSSQDGDNFPYANAK
        MDSTA L RGFS  P PPL  TT S   R  L   TF  N  +SS+ LL++KSN  +NYN ++ S NKNNN IDI+C   + S  S S DG NFP ANA+
Subjt:  MDSTAFLRRGFS--PAPPLLPTTASVAGRLPL---TFRCN--VSSIRLLVEKSNKIENYN-KHRSCNKNNNGIDIRCAQWAKS-SSSSQDGDNFPYANAK

Query:  GALQSLLAGLFSFDTPTGD-SKIIVAEKAIVYTLLSDESNEDVQEYWK
         AL+SLL   FS+ +   D +  +  +K      L D++ ++ ++  K
Subjt:  GALQSLLAGLFSFDTPTGD-SKIIVAEKAIVYTLLSDESNEDVQEYWK

XP_008444310.1 PREDICTED: uncharacterized protein LOC103487676 [Cucumis melo]1.3e-1450.36Show/hide
Query:  MDSTAFLRRGFSPAP-PLLPTT-ASVAGR--LP-LTFRCNVSSIRLLVEKSNK--IENYNKHRSCNKNNNG-IDIRCAQWAKSSSSSQDGDNFPYANAKG
        MDSTA L RGFS AP P LPTT  SVAGR  LP LTFRCNVSS+ LLV+KSN   I  Y    +   NNNG IDI+C + ++     +D  NFP  NA+ 
Subjt:  MDSTAFLRRGFSPAP-PLLPTT-ASVAGR--LP-LTFRCNVSSIRLLVEKSNK--IENYNKHRSCNKNNNG-IDIRCAQWAKSSSSSQDGDNFPYANAKG

Query:  ALQSLLAGLFSFDTPTGDSKIIVAEKAIVYTLLSDESNE
        ALQSLL   FS    T  + I  A+ + +  LL+   NE
Subjt:  ALQSLLAGLFSFDTPTGDSKIIVAEKAIVYTLLSDESNE

XP_038895250.1 uncharacterized protein LOC120083532 [Benincasa hispida]4.0e-2765.29Show/hide
Query:  MDSTAFLRRGFSPAPPLLPTTASVAGRLPLTFRCNVSSIRLLVEKSNKIENYNKHRSCNKNNNG--IDIRCAQWAKSSSSSQDGDNFPYANAKGALQSLL
        MDST FLRRGFSPAPP LPTTA +  RLPL+FRCNVSSI LLVEKSN  ENYNK+R CNKNNNG  IDI C +    SS+S+ G NFP  NAK ALQSL 
Subjt:  MDSTAFLRRGFSPAPPLLPTTASVAGRLPLTFRCNVSSIRLLVEKSNKIENYNKHRSCNKNNNG--IDIRCAQWAKSSSSSQDGDNFPYANAKGALQSLL

Query:  AGLFSFDTPT-GDSKIIVAEK
           FSFD      +K I  EK
Subjt:  AGLFSFDTPT-GDSKIIVAEK

TrEMBL top hitse value%identityAlignment
A0A0A0LXK7 Uncharacterized protein1.5e-1143.92Show/hide
Query:  MDSTAFLRRGFS--PAPPLLPTTASVAGRLPL---TFRCN--VSSIRLLVEKSNKIENYN-KHRSCNKNNNGIDIRCAQWAKS-SSSSQDGDNFPYANAK
        MDSTA L RGFS  P PPL  TT S   R  L   TF  N  +SS+ LL++KSN  +NYN ++ S NKNNN IDI+C   + S  S S DG NFP ANA+
Subjt:  MDSTAFLRRGFS--PAPPLLPTTASVAGRLPL---TFRCN--VSSIRLLVEKSNKIENYN-KHRSCNKNNNGIDIRCAQWAKS-SSSSQDGDNFPYANAK

Query:  GALQSLLAGLFSFDTPTGD-SKIIVAEKAIVYTLLSDESNEDVQEYWK
         AL+SLL   FS+ +   D +  +  +K      L D++ ++ ++  K
Subjt:  GALQSLLAGLFSFDTPTGD-SKIIVAEKAIVYTLLSDESNEDVQEYWK

A0A1S3BA19 uncharacterized protein LOC1034876766.5e-1550.36Show/hide
Query:  MDSTAFLRRGFSPAP-PLLPTT-ASVAGR--LP-LTFRCNVSSIRLLVEKSNK--IENYNKHRSCNKNNNG-IDIRCAQWAKSSSSSQDGDNFPYANAKG
        MDSTA L RGFS AP P LPTT  SVAGR  LP LTFRCNVSS+ LLV+KSN   I  Y    +   NNNG IDI+C + ++     +D  NFP  NA+ 
Subjt:  MDSTAFLRRGFSPAP-PLLPTT-ASVAGR--LP-LTFRCNVSSIRLLVEKSNK--IENYNKHRSCNKNNNG-IDIRCAQWAKSSSSSQDGDNFPYANAKG

Query:  ALQSLLAGLFSFDTPTGDSKIIVAEKAIVYTLLSDESNE
        ALQSLL   FS    T  + I  A+ + +  LL+   NE
Subjt:  ALQSLLAGLFSFDTPTGDSKIIVAEKAIVYTLLSDESNE

A0A5D3DAR2 Uncharacterized protein9.3e-1449.28Show/hide
Query:  MDSTAFLRRGFSPAP-PLLPTT-ASVAGR--LP-LTFRCNVSSIRLLVEKSNK--IENYNKHRSCNKNNNG-IDIRCAQWAKSSSSSQDGDNFPYANAKG
        MDSTA L RGFS AP P LPTT  SVAGR  LP LTFRCNVSS+ LLV+KSN   I  Y    +   NNNG IDI+C + ++     +D  NFP  NA+ 
Subjt:  MDSTAFLRRGFSPAP-PLLPTT-ASVAGR--LP-LTFRCNVSSIRLLVEKSNK--IENYNKHRSCNKNNNG-IDIRCAQWAKSSSSSQDGDNFPYANAKG

Query:  ALQSLLAGLFSFDTPTGDSKIIVAEKAIVYTLLSDESN
        ALQSLL      DT   D+  I   K   ++ L+   N
Subjt:  ALQSLLAGLFSFDTPTGDSKIIVAEKAIVYTLLSDESN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCAACCGCCTTCCTCCGCCGTGGCTTCTCCCCAGCACCACCACTTCTCCCGACCACCGCTTCGGTTGCCGGACGACTTCCATTGACCTTCCGTTGTAACGTGTC
CTCGATTCGGCTCTTGGTCGAGAAATCGAATAAGATTGAGAACTACAATAAACATAGAAGTTGTAACAAGAATAACAATGGGATTGATATACGGTGCGCTCAATGGGCCA
AATCGTCGTCTTCTTCTCAAGATGGTGACAATTTTCCTTATGCAAACGCCAAAGGGGCCTTACAGTCGCTTTTGGCCGGCTTATTCTCTTTTGATACCCCGACCGGTGAT
TCAAAAATTATAGTTGCTGAAAAGGCTATTGTATATACCTTATTAAGCGACGAATCTAATGAAGATGTTCAAGAATATTGGAAGACTTATGTGGACTATATAGGCAGTGG
ACCATCCGAGACTTAG
mRNA sequenceShow/hide mRNA sequence
TATTTCAACACAAAAGATAAAATAAAATTCAACTCAATCATGGACTCAACCGCCTTCCTCCGCCGTGGCTTCTCCCCAGCACCACCACTTCTCCCGACCACCGCTTCGGT
TGCCGGACGACTTCCATTGACCTTCCGTTGTAACGTGTCCTCGATTCGGCTCTTGGTCGAGAAATCGAATAAGATTGAGAACTACAATAAACATAGAAGTTGTAACAAGA
ATAACAATGGGATTGATATACGGTGCGCTCAATGGGCCAAATCGTCGTCTTCTTCTCAAGATGGTGACAATTTTCCTTATGCAAACGCCAAAGGGGCCTTACAGTCGCTT
TTGGCCGGCTTATTCTCTTTTGATACCCCGACCGGTGATTCAAAAATTATAGTTGCTGAAAAGGCTATTGTATATACCTTATTAAGCGACGAATCTAATGAAGATGTTCA
AGAATATTGGAAGACTTATGTGGACTATATAGGCAGTGGACCATCCGAGACTTAGAATAATATTGTAATTAATAATTATATCCTTTTATATGGGGGAAAATAATTTGTAT
TTTTCAATTCTTGTTCTTTATTAATATTTAATATTTGTGCTACTTTGTTTAAGACCATGTATTTCCCCAAATTTATCTATGTAATTCAAGTACTTTTGGAAGAACCCCAA
Protein sequenceShow/hide protein sequence
MDSTAFLRRGFSPAPPLLPTTASVAGRLPLTFRCNVSSIRLLVEKSNKIENYNKHRSCNKNNNGIDIRCAQWAKSSSSSQDGDNFPYANAKGALQSLLAGLFSFDTPTGD
SKIIVAEKAIVYTLLSDESNEDVQEYWKTYVDYIGSGPSET