; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G008990 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G008990
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein TIFY 5A-like
Genome locationchr02:8611034..8611546
RNA-Seq ExpressionLsi02G008990
SyntenyLsi02G008990
Gene Ontology termsGO:0009611 - response to wounding (biological process)
GO:0031347 - regulation of defense response (biological process)
GO:2000022 - regulation of jasmonic acid mediated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR010399 - Tify domain
IPR018467 - CO/COL/TOC1, conserved site
IPR040390 - TIFY/JAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583892.1 Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. sororia]2.4e-5584.4Show/hide
Query:  MAVLPVSMEQNCNLELRLSPSSSTFFSDNDSGDHRHH-PRLHQFLDDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLERS
        MAVLP+SMEQNCNLELRLSPS+S  FSD DSGDHRHH PRLHQFLDDE +KNSQQQMTIFYNGRVCVADFTEDQA+AII LATRH+EERS N ++KLERS
Subjt:  MAVLPVSMEQNCNLELRLSPSSSTFFSDNDSGDHRHH-PRLHQFLDDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLERS

Query:  TSPKQCNGE--AVSGLSMKRSLQRFLQKRKNRIQSASPYNH
         SP+QCNGE  + SGLSMKRSLQRFLQKRKNR+QSASPYNH
Subjt:  TSPKQCNGE--AVSGLSMKRSLQRFLQKRKNRIQSASPYNH

XP_022927242.1 protein TIFY 5A-like [Cucurbita moschata]4.9e-5685.11Show/hide
Query:  MAVLPVSMEQNCNLELRLSPSSSTFFSDNDSGDHRHH-PRLHQFLDDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLERS
        MAVLP+SMEQNCNLELRLSPS+S  FSD DSGDHRHH PRLHQFLDDE +KNSQQQMTIFYNGRVCVADFTEDQA+AIIMLATRH+EERS N ++KLERS
Subjt:  MAVLPVSMEQNCNLELRLSPSSSTFFSDNDSGDHRHH-PRLHQFLDDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLERS

Query:  TSPKQCNGE--AVSGLSMKRSLQRFLQKRKNRIQSASPYNH
         SP+QCNGE  + SGLSMKRSLQRFLQKRKNR+QSASPYNH
Subjt:  TSPKQCNGE--AVSGLSMKRSLQRFLQKRKNRIQSASPYNH

XP_023001485.1 protein TIFY 5A-like [Cucurbita maxima]3.0e-5382.98Show/hide
Query:  MAVLPVSMEQNCNLELRLSPSSSTFFSDNDSGD-HRHHPRLHQFLDDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLERS
        M VLP+SMEQNCNLELRLSPS+S  FSD DSGD  RH PRLHQFLDDE +KNSQQQMTIFYNGRVCVADFTEDQA+AIIMLATRH+EERS N  +KLERS
Subjt:  MAVLPVSMEQNCNLELRLSPSSSTFFSDNDSGD-HRHHPRLHQFLDDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLERS

Query:  TSPKQCNGE--AVSGLSMKRSLQRFLQKRKNRIQSASPYNH
         SP+QCNGE  + SGLSMKRSLQRFLQKRKNR+QSASPYNH
Subjt:  TSPKQCNGE--AVSGLSMKRSLQRFLQKRKNRIQSASPYNH

XP_023520178.1 protein TIFY 5A-like [Cucurbita pepo subsp. pepo]1.2e-5482.98Show/hide
Query:  MAVLPVSMEQNCNLELRLSPSSSTFFSDNDSGDHRHH-PRLHQFLDDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLERS
        MAVLP+SMEQ+CNLELRLSPS+S  FSD DSGDHRHH PRLHQFLDDE +KNSQQQMTIFYNGRVCV DFTEDQA+AIIMLATRH+EERS N ++KLERS
Subjt:  MAVLPVSMEQNCNLELRLSPSSSTFFSDNDSGDHRHH-PRLHQFLDDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLERS

Query:  TSPKQCNGE--AVSGLSMKRSLQRFLQKRKNRIQSASPYNH
         SP++CNGE  + SGLSMKRSLQRFLQKRKNR+QSASPYNH
Subjt:  TSPKQCNGE--AVSGLSMKRSLQRFLQKRKNRIQSASPYNH

XP_038896063.1 protein TIFY 5A-like [Benincasa hispida]9.5e-6087.5Show/hide
Query:  MAVLPVSMEQNCNLELRLSPSSSTFFSDNDSGDHR--HHPRLHQFLDDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLER
        MAVLP+SMEQNCNLELRLSPSSSTF+  N S DHR  HHP LHQFLDDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRH+EERS NPQQKLER
Subjt:  MAVLPVSMEQNCNLELRLSPSSSTFFSDNDSGDHR--HHPRLHQFLDDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLER

Query:  STSPKQCNGEAV----SGLSMKRSLQRFLQKRKNRIQSASPYNH
        STSP+QCN EAV    SGLSMKRSLQRFLQKRKNRIQSASPY+H
Subjt:  STSPKQCNGEAV----SGLSMKRSLQRFLQKRKNRIQSASPYNH

TrEMBL top hitse value%identityAlignment
A0A0A0LXJ5 Tify domain-containing protein4.5e-4774.17Show/hide
Query:  MAVLPVSMEQNCNLELRLSPSSSTFFSDNDSGDHRHHPRLHQFL--DDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLER
        MA+LPVS++ NCNLELRLSPSSSTF S      H HHP LH FL  DDE NKNS QQMTIFYNGRVCVADFTEDQAKAIIMLA+R +E+RSTNP+ KLER
Subjt:  MAVLPVSMEQNCNLELRLSPSSSTFFSDNDSGDHRHHPRLHQFL--DDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLER

Query:  -STSPKQCNGEAV----------SGLSMKRSLQRFLQKRKNRIQSASPYNH
         STSP QC+ E V          SGLSMKRSLQRFLQKRKNRIQSASPYNH
Subjt:  -STSPKQCNGEAV----------SGLSMKRSLQRFLQKRKNRIQSASPYNH

A0A6J1CDV5 protein TIFY 5A1.7e-3867.61Show/hide
Query:  MAVLPVSMEQNCNLELRLSPSSSTFFSDNDSGDHRHHPRLHQFLDDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLERST
        MAVLPVSME+NCNLELRLSPS+S  FS +DSGD +  PRLH FL +E +KN  QQMTIFYNGRVCV DFTE+QA+AIIMLATRH +E  T  +++    +
Subjt:  MAVLPVSMEQNCNLELRLSPSSSTFFSDNDSGDHRHHPRLHQFLDDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLERST

Query:  SPKQCNGEA----VSGLSMKRSLQRFLQKRKNRIQSASPYNH
        SP+Q N  A    VSG+SMK+SLQRFLQKRK+RIQSASPY+H
Subjt:  SPKQCNGEA----VSGLSMKRSLQRFLQKRKNRIQSASPYNH

A0A6J1EGL8 protein TIFY 5A-like2.4e-5685.11Show/hide
Query:  MAVLPVSMEQNCNLELRLSPSSSTFFSDNDSGDHRHH-PRLHQFLDDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLERS
        MAVLP+SMEQNCNLELRLSPS+S  FSD DSGDHRHH PRLHQFLDDE +KNSQQQMTIFYNGRVCVADFTEDQA+AIIMLATRH+EERS N ++KLERS
Subjt:  MAVLPVSMEQNCNLELRLSPSSSTFFSDNDSGDHRHH-PRLHQFLDDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLERS

Query:  TSPKQCNGE--AVSGLSMKRSLQRFLQKRKNRIQSASPYNH
         SP+QCNGE  + SGLSMKRSLQRFLQKRKNR+QSASPYNH
Subjt:  TSPKQCNGE--AVSGLSMKRSLQRFLQKRKNRIQSASPYNH

A0A6J1JX98 protein TIFY 5A-like2.9e-3872.26Show/hide
Query:  MAVLPVSMEQNCNLELRLSPSSSTFFSDNDSGD-HRHHPRLHQFLDDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLERS
        MAVLP+ ME+NCNLEL LS SSS   SD+DSGD  RHHP LHQFLDDE +KNS QQMTIFYNGRVCVADFTEDQA+AIIMLATR    RST+ + + E  
Subjt:  MAVLPVSMEQNCNLELRLSPSSSTFFSDNDSGD-HRHHPRLHQFLDDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLERS

Query:  TSPKQCNGEAVSGLSMKRSLQRFLQKRKNRIQSASPY
          P +  G + SGLSMKRSLQRFL KRKNRIQSASPY
Subjt:  TSPKQCNGEAVSGLSMKRSLQRFLQKRKNRIQSASPY

A0A6J1KLB7 protein TIFY 5A-like1.4e-5382.98Show/hide
Query:  MAVLPVSMEQNCNLELRLSPSSSTFFSDNDSGD-HRHHPRLHQFLDDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLERS
        M VLP+SMEQNCNLELRLSPS+S  FSD DSGD  RH PRLHQFLDDE +KNSQQQMTIFYNGRVCVADFTEDQA+AIIMLATRH+EERS N  +KLERS
Subjt:  MAVLPVSMEQNCNLELRLSPSSSTFFSDNDSGD-HRHHPRLHQFLDDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLERS

Query:  TSPKQCNGE--AVSGLSMKRSLQRFLQKRKNRIQSASPYNH
         SP+QCNGE  + SGLSMKRSLQRFLQKRKNR+QSASPYNH
Subjt:  TSPKQCNGE--AVSGLSMKRSLQRFLQKRKNRIQSASPYNH

SwissProt top hitse value%identityAlignment
A2XSX6 Protein TIFY 91.4e-0537.93Show/hide
Query:  MTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLERSTSPKQCNGEAVSG------LSMKRSLQRFLQKRKNRIQSASPY
        MT+FYNG V V D + D+A+AI+ +AT              E + +     G A+ G      L+  +SLQRFL KRK R+ S  PY
Subjt:  MTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLERSTSPKQCNGEAVSG------LSMKRSLQRFLQKRKNRIQSASPY

F4J078 Protein JAZ137.7e-0430.89Show/hide
Query:  QNCNLELRLSPSSSTFFSDNDSGDHRHHPRLHQFLDDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLERSTSPKQCNGEA
        + C+L+L LSP +ST  S +              ++D  +    +++  FY+GR+   D  E Q +AII +A++  +   T  +    R  SP  C    
Subjt:  QNCNLELRLSPSSSTFFSDNDSGDHRHHPRLHQFLDDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLERSTSPKQCNGEA

Query:  VSGLSMKRSLQRFLQKRKNRIQS
            S+KRS++RFL+KRK R +S
Subjt:  VSGLSMKRSLQRFLQKRKNRIQS

O64687 Protein TIFY 5B2.2e-1138.69Show/hide
Query:  VSMEQNCNLELRLSPSSSTFFSDNDSGDHRHHPRLHQFLDDEFN--KNSQQQMTIFYNGRVCV-ADFTEDQAKAIIMLATRHIEERSTNPQQK--LERST
        + M+  C+LELRL  SS          D   H  L +    E +  K   Q +TIFYNG +CV +D T  +A AI+ LA+R +EE+S + +     +  T
Subjt:  VSMEQNCNLELRLSPSSSTFFSDNDSGDHRHHPRLHQFLDDEFN--KNSQQQMTIFYNGRVCV-ADFTEDQAKAIIMLATRHIEERSTNPQQK--LERST

Query:  SPKQCNGEAVSGLSMKRSLQRFLQKRKNRIQSASPYN
         P           SMKRSL  FLQKR  RIQ+ SPY+
Subjt:  SPKQCNGEAVSGLSMKRSLQRFLQKRKNRIQSASPYN

Q7XV97 Protein TIFY 91.4e-0537.93Show/hide
Query:  MTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLERSTSPKQCNGEAVSG------LSMKRSLQRFLQKRKNRIQSASPY
        MT+FYNG V V D + D+A+AI+ +AT              E + +     G A+ G      L+  +SLQRFL KRK R+ S  PY
Subjt:  MTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLERSTSPKQCNGEAVSG------LSMKRSLQRFLQKRKNRIQSASPY

Q8LBM2 Protein TIFY 5A2.0e-1239.1Show/hide
Query:  VSMEQNCNLELRLSPSSSTFFSDNDSGDHRHHPRLHQFLDDEFNKNSQQQMTIFYNGRVCV-ADFTEDQAKAIIMLATRHIEERSTNPQQKLERSTSPKQ
        + ++QNC+LELRL P+S     D+DS D           + + N+ S Q++TIFYNG++C  +D T  QA++II +A+R ++ +S++        ++   
Subjt:  VSMEQNCNLELRLSPSSSTFFSDNDSGDHRHHPRLHQFLDDEFNKNSQQQMTIFYNGRVCV-ADFTEDQAKAIIMLATRHIEERSTNPQQKLERSTSPKQ

Query:  CNGEAVSGLSMKRSLQRFLQKRKNRIQSASPYN
         N       SMK+SLQ FLQKRK RIQ+ SPY+
Subjt:  CNGEAVSGLSMKRSLQRFLQKRKNRIQSASPYN

Arabidopsis top hitse value%identityAlignment
AT1G30135.1 jasmonate-zim-domain protein 81.4e-1339.1Show/hide
Query:  VSMEQNCNLELRLSPSSSTFFSDNDSGDHRHHPRLHQFLDDEFNKNSQQQMTIFYNGRVCV-ADFTEDQAKAIIMLATRHIEERSTNPQQKLERSTSPKQ
        + ++QNC+LELRL P+S     D+DS D           + + N+ S Q++TIFYNG++C  +D T  QA++II +A+R ++ +S++        ++   
Subjt:  VSMEQNCNLELRLSPSSSTFFSDNDSGDHRHHPRLHQFLDDEFNKNSQQQMTIFYNGRVCV-ADFTEDQAKAIIMLATRHIEERSTNPQQKLERSTSPKQ

Query:  CNGEAVSGLSMKRSLQRFLQKRKNRIQSASPYN
         N       SMK+SLQ FLQKRK RIQ+ SPY+
Subjt:  CNGEAVSGLSMKRSLQRFLQKRKNRIQSASPYN

AT2G34600.1 jasmonate-zim-domain protein 71.6e-1238.69Show/hide
Query:  VSMEQNCNLELRLSPSSSTFFSDNDSGDHRHHPRLHQFLDDEFN--KNSQQQMTIFYNGRVCV-ADFTEDQAKAIIMLATRHIEERSTNPQQK--LERST
        + M+  C+LELRL  SS          D   H  L +    E +  K   Q +TIFYNG +CV +D T  +A AI+ LA+R +EE+S + +     +  T
Subjt:  VSMEQNCNLELRLSPSSSTFFSDNDSGDHRHHPRLHQFLDDEFN--KNSQQQMTIFYNGRVCV-ADFTEDQAKAIIMLATRHIEERSTNPQQK--LERST

Query:  SPKQCNGEAVSGLSMKRSLQRFLQKRKNRIQSASPYN
         P           SMKRSL  FLQKR  RIQ+ SPY+
Subjt:  SPKQCNGEAVSGLSMKRSLQRFLQKRKNRIQSASPYN

AT3G22275.1 unknown protein5.5e-0530.89Show/hide
Query:  QNCNLELRLSPSSSTFFSDNDSGDHRHHPRLHQFLDDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLERSTSPKQCNGEA
        + C+L+L LSP +ST  S +              ++D  +    +++  FY+GR+   D  E Q +AII +A++  +   T  +    R  SP  C    
Subjt:  QNCNLELRLSPSSSTFFSDNDSGDHRHHPRLHQFLDDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLERSTSPKQCNGEA

Query:  VSGLSMKRSLQRFLQKRKNRIQS
            S+KRS++RFL+KRK R +S
Subjt:  VSGLSMKRSLQRFLQKRKNRIQS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTCTTCCCGTTTCCATGGAGCAAAATTGCAACTTGGAACTTCGTCTCTCTCCTTCTTCTTCTACATTCTTCTCCGACAATGATTCCGGCGACCACCGTCACCA
CCCTCGCCTCCATCAGTTCTTGGATGATGAATTTAACAAAAATTCTCAGCAGCAAATGACCATTTTCTACAATGGTAGAGTTTGTGTTGCGGATTTTACAGAGGATCAAG
CTAAAGCCATAATAATGCTTGCAACAAGACACATCGAGGAGAGATCGACAAATCCTCAACAGAAATTGGAACGATCGACATCGCCGAAGCAGTGTAACGGTGAAGCTGTT
TCTGGGCTCTCCATGAAGCGATCTTTACAGAGGTTTTTACAGAAAAGGAAGAACAGGATTCAATCTGCTTCACCTTACAATCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTTCTTCCCGTTTCCATGGAGCAAAATTGCAACTTGGAACTTCGTCTCTCTCCTTCTTCTTCTACATTCTTCTCCGACAATGATTCCGGCGACCACCGTCACCA
CCCTCGCCTCCATCAGTTCTTGGATGATGAATTTAACAAAAATTCTCAGCAGCAAATGACCATTTTCTACAATGGTAGAGTTTGTGTTGCGGATTTTACAGAGGATCAAG
CTAAAGCCATAATAATGCTTGCAACAAGACACATCGAGGAGAGATCGACAAATCCTCAACAGAAATTGGAACGATCGACATCGCCGAAGCAGTGTAACGGTGAAGCTGTT
TCTGGGCTCTCCATGAAGCGATCTTTACAGAGGTTTTTACAGAAAAGGAAGAACAGGATTCAATCTGCTTCACCTTACAATCATTAA
Protein sequenceShow/hide protein sequence
MAVLPVSMEQNCNLELRLSPSSSTFFSDNDSGDHRHHPRLHQFLDDEFNKNSQQQMTIFYNGRVCVADFTEDQAKAIIMLATRHIEERSTNPQQKLERSTSPKQCNGEAV
SGLSMKRSLQRFLQKRKNRIQSASPYNH