; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G009110 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G009110
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionsignal recognition particle 14 kDa protein
Genome locationchr02:8753224..8755002
RNA-Seq ExpressionLsi02G009110
SyntenyLsi02G009110
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0006614 - SRP-dependent cotranslational protein targeting to membrane (biological process)
GO:0007186 - G protein-coupled receptor signaling pathway (biological process)
GO:0005786 - signal recognition particle, endoplasmic reticulum targeting (cellular component)
GO:0008312 - 7S RNA binding (molecular function)
GO:0030942 - endoplasmic reticulum signal peptide binding (molecular function)
InterPro domainsIPR003210 - Signal recognition particle, SRP14 subunit
IPR009018 - Signal recognition particle, SRP9/SRP14 subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019502.1 Signal recognition particle 14 kDa protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-5291.47Show/hide
Query:  VGLAEDFKFIEDVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAH
        +GLA    +   VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAH
Subjt:  VGLAEDFKFIEDVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAH

Query:  MTALKKRERKDKKKAPEAEKVLKKKPRKV
        MTALKKRERKDKKKA EAEK LKKKPRKV
Subjt:  MTALKKRERKDKKKAPEAEKVLKKKPRKV

KGN66307.2 hypothetical protein Csa_023187 [Cucumis sativus]1.9e-5198.29Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAPEAEKVLKKKPRKV
        KKA EAEK LKKKPRKV
Subjt:  KKAPEAEKVLKKKPRKV

XP_004145229.1 signal recognition particle 14 kDa protein [Cucumis sativus]1.9e-5198.29Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAPEAEKVLKKKPRKV
        KKA EAEK LKKKPRKV
Subjt:  KKAPEAEKVLKKKPRKV

XP_038893989.1 signal recognition particle 14 kDa protein isoform X1 [Benincasa hispida]2.2e-5299.15Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAPEAEKVLKKKPRKV
        KKAPEAEK LKKKPRKV
Subjt:  KKAPEAEKVLKKKPRKV

XP_038893990.1 signal recognition particle 14 kDa protein isoform X2 [Benincasa hispida]2.2e-5299.15Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAPEAEKVLKKKPRKV
        KKAPEAEK LKKKPRKV
Subjt:  KKAPEAEKVLKKKPRKV

TrEMBL top hitse value%identityAlignment
A0A0A0LYE0 Uncharacterized protein9.0e-5298.29Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAPEAEKVLKKKPRKV
        KKA EAEK LKKKPRKV
Subjt:  KKAPEAEKVLKKKPRKV

A0A1S3BBI8 signal recognition particle 14 kDa protein9.0e-5298.29Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAPEAEKVLKKKPRKV
        KKA EAEK LKKKPRKV
Subjt:  KKAPEAEKVLKKKPRKV

A0A5A7UG42 Signal recognition particle 14 kDa protein9.0e-5298.29Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAPEAEKVLKKKPRKV
        KKA EAEK LKKKPRKV
Subjt:  KKAPEAEKVLKKKPRKV

A0A6J1K2P1 signal recognition particle 14 kDa protein-like isoform X11.2e-5197.44Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKD+
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAPEAEKVLKKKPRKV
        KKAPEAEK  KKKPRKV
Subjt:  KKAPEAEKVLKKKPRKV

A0A6J1KGP7 signal recognition particle 14 kDa protein-like isoform X19.0e-5298.29Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAPEAEKVLKKKPRKV
        KKA EAEK LKKKPRKV
Subjt:  KKAPEAEKVLKKKPRKV

SwissProt top hitse value%identityAlignment
O04421 Signal recognition particle 14 kDa protein3.0e-4485.19Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        VLLQLDPFLNELTSMFE+S EKGSVWVTLKRSSLKSKVQ+ K+++ G+ IEYRCLIRATDGKKT+STSVGAKDH RFQASY+TILKAHMTALKKRERKD+
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAPEAEK
        KK+ EAEK
Subjt:  KKAPEAEK

O04433 Signal recognition particle 14 kDa protein4.6e-3768.1Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        V+LQ DPFL+ELTSM+ERSTEKGSVWVT+KRSS+K + +  KM   G+ +EYRCL+RATDGKK I T++ AK++L+FQASY+T+LKAHM ALKKRERKDK
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAPEAEKVLKKKPRK
        KKA E EK+ +K P+K
Subjt:  KKAPEAEKVLKKKPRK

P37108 Signal recognition particle 14 kDa protein7.0e-1745.79Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKD
        VLL+ + FL ELT +F++    GSV++TLK+   ++K    K T  G +P + +CL+RATDGKK IST V +K+  +FQ +YS +L+A+M  LKKR++K+
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKD

Query:  KKKAPEA
        K K  +A
Subjt:  KKKAPEA

Q4R5C7 Signal recognition particle 14 kDa protein7.0e-1745.79Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKD
        VLL+ + FL ELT +F++    GSV++TLK+   ++K    K T  G +P + +CL+RATDGKK IST V +K+  +FQ +YS +L+A+M  LKKR++K+
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKD

Query:  KKKAPEA
        K K  +A
Subjt:  KKKAPEA

Q5RBX7 Signal recognition particle 14 kDa protein7.0e-1745.79Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKD
        VLL+ + FL ELT +F++    GSV++TLK+   ++K    K T  G +P + +CL+RATDGKK IST V +K+  +FQ +YS +L+A+M  LKKR++K+
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKD

Query:  KKKAPEA
        K K  +A
Subjt:  KKKAPEA

Arabidopsis top hitse value%identityAlignment
AT2G43640.1 Signal recognition particle, SRP9/SRP14 subunit2.1e-4585.19Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        VLLQLDPFLNELTSMFE+S EKGSVWVTLKRSSLKSKVQ+ K+++ G+ IEYRCLIRATDGKKT+STSVGAKDH RFQASY+TILKAHMTALKKRERKD+
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAPEAEK
        KK+ EAEK
Subjt:  KKAPEAEK

AT2G43640.2 Signal recognition particle, SRP9/SRP14 subunit2.1e-4585.19Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        VLLQLDPFLNELTSMFE+S EKGSVWVTLKRSSLKSKVQ+ K+++ G+ IEYRCLIRATDGKKT+STSVGAKDH RFQASY+TILKAHMTALKKRERKD+
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAPEAEK
        KK+ EAEK
Subjt:  KKAPEAEK

AT2G43640.3 Signal recognition particle, SRP9/SRP14 subunit3.6e-3775.93Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK
        VLLQLDPFLNELTSMFE+S EK         +SLKSKVQ+ K+++ G+ IEYRCLIRATDGKKT+STSVGAKDH RFQASY+TILKAHMTALKKRERKD+
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDK

Query:  KKAPEAEK
        KK+ EAEK
Subjt:  KKAPEAEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGTTATTGCAACATCTTGCAGATTCTACTTGGAAGTCATGTGTACAGACCAGGATCATGGTGCTTCTATATCACTTCGGTGTAGGATTAGCAGAAGATTTCAA
ATTTATTGAAGATGTTCTACTGCAGCTAGACCCTTTTCTCAATGAACTTACCAGCATGTTTGAGCGTAGTACCGAGAAGGGTTCAGTGTGGGTTACTCTAAAACGATCAT
CACTGAAGTCCAAGGTGCAGAGAAATAAAATGACCACTGCTGGTCAACCTATCGAGTATAGATGCCTCATCCGTGCAACAGATGGGAAGAAGACAATTTCAACTTCAGTT
GGAGCAAAAGATCATCTGAGATTTCAAGCTTCCTATTCAACTATTCTTAAAGCCCACATGACTGCTCTTAAAAAGAGAGAGAGAAAGGACAAGAAGAAGGCACCAGAGGC
AGAGAAGGTTCTGAAGAAAAAACCTAGGAAAGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGTTATTGCAACATCTTGCAGATTCTACTTGGAAGTCATGTGTACAGACCAGGATCATGGTGCTTCTATATCACTTCGGTGTAGGATTAGCAGAAGATTTCAA
ATTTATTGAAGATGTTCTACTGCAGCTAGACCCTTTTCTCAATGAACTTACCAGCATGTTTGAGCGTAGTACCGAGAAGGGTTCAGTGTGGGTTACTCTAAAACGATCAT
CACTGAAGTCCAAGGTGCAGAGAAATAAAATGACCACTGCTGGTCAACCTATCGAGTATAGATGCCTCATCCGTGCAACAGATGGGAAGAAGACAATTTCAACTTCAGTT
GGAGCAAAAGATCATCTGAGATTTCAAGCTTCCTATTCAACTATTCTTAAAGCCCACATGACTGCTCTTAAAAAGAGAGAGAGAAAGGACAAGAAGAAGGCACCAGAGGC
AGAGAAGGTTCTGAAGAAAAAACCTAGGAAAGTATGAAAGGGGGGCTCTCTTTGCTTCTGTAGGTTCCTCAAACCAGTGTAACTTCCTTCTTTTCGTTACCCTTGTTTTT
CATTCCTTTGACCTTGATGAGTGTTATGCTTCCCCCATATTTCTAGCAAAACGCAGAGGAAAGAAGGGGAGAGGTAGGATTTTGGAATTTCAGGAATTTAAAAATACTTG
ATCTTGTCATTTTTTTTCCTTCAAAAAGATTTAAAATATACATGTGATTTTACTGTGGAATTGTCTGGAAGTTTTGCATACTCTATTCCTTGAAGCTATAAAAACAACTT
GACCTTGCTTAAA
Protein sequenceShow/hide protein sequence
MAMLLQHLADSTWKSCVQTRIMVLLYHFGVGLAEDFKFIEDVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSV
GAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEKVLKKKPRKV