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Lsi02G009150 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G009150
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionBEST Arabidopsis thaliana protein match is: Galact s in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Genome locationchr02:8793796..8794089
RNA-Seq ExpressionLsi02G009150
SyntenyLsi02G009150
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054015.1 hypothetical protein E6C27_scaffold318G00710 [Cucumis melo var. makuwa]9.1e-3384.54Show/hide
Query:  MAATSRLARFISEACPPQVVSVMRRRSPKVLDTINEEDQREALASSSSLKIDKFSISSPPSPMAASPTSPASSAAVNSKYFLNQVPVPLRPFSIFEH
        MAATSRLARFISEACPPQ VSVMRRRSPKVLDTINEEDQRE+LASSSS KIDKFS+SSPP     SP S A++AAVNSKYFL+QVPVPL PFSIFEH
Subjt:  MAATSRLARFISEACPPQVVSVMRRRSPKVLDTINEEDQREALASSSSLKIDKFSISSPPSPMAASPTSPASSAAVNSKYFLNQVPVPLRPFSIFEH

KAF7842889.1 uncharacterized protein G2W53_005187 [Senna tora]3.0e-1254.46Show/hide
Query:  ATSRLARFISEACPPQVVSVMRRRSPKVLDTINEEDQREALA---SSSSLKIDKFSISSPPSPMAASPTSPASSAAV---NSKYFLNQVPVPLRPFSIFE
        A SR+ARFI E  PPQ V+VMR R+ K+LDTI EEDQRE  +   SSSS K    S SSP SP+++SP++ ASSA++   NSKYFL +V    R  SI  
Subjt:  ATSRLARFISEACPPQVVSVMRRRSPKVLDTINEEDQREALA---SSSSLKIDKFSISSPPSPMAASPTSPASSAAV---NSKYFLNQVPVPLRPFSIFE

Query:  H
        H
Subjt:  H

KAG6583880.1 hypothetical protein SDJN03_19812, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2389.33Show/hide
Query:  MAATSRLARFISEACPPQVVSVMRRRSPKVLDTINEEDQREALASSSSLKIDKFSISSPPSPMAASPTSPASSAA
        MAATSRLARFISEACPPQ VSVMRRRSPKVLDTINEED REAL+SSSSLKIDKFS+SS PS MAASP SPA+SAA
Subjt:  MAATSRLARFISEACPPQVVSVMRRRSPKVLDTINEEDQREALASSSSLKIDKFSISSPPSPMAASPTSPASSAA

KAG7019500.1 hypothetical protein SDJN02_18461, partial [Cucurbita argyrosperma subsp. argyrosperma]8.0e-2986.36Show/hide
Query:  MAATSRLARFISEACPPQVVSVMRRRSPKVLDTINEEDQREALASSSSLKIDKFSISSPPSPMAASPTSPASSAAVNSKYFLNQVPVP
        MAATSRLARFISEACPPQ VSVMRRRSPKVLDTINEED REAL+SSSSLKIDKFS+SS PS MAASP SPA+SAAV+SKYFLNQ   P
Subjt:  MAATSRLARFISEACPPQVVSVMRRRSPKVLDTINEEDQREALASSSSLKIDKFSISSPPSPMAASPTSPASSAAVNSKYFLNQVPVP

KGN65872.1 hypothetical protein Csa_023250 [Cucumis sativus]5.0e-3180.41Show/hide
Query:  MAATSRLARFISEACPPQVVSVMRRRSPKVLDTINEEDQREALASSSSLKIDKFSISSPPSPMAASPTSPASSAAVNSKYFLNQVPVPLRPFSIFEH
        MAATSRLARFISEACPPQ VSVMRRRSP+VLDTINEEDQREAL SSSS KIDKFS+ SPPSP        +S+AA+NSKYFL+QVPVPL PFSIFEH
Subjt:  MAATSRLARFISEACPPQVVSVMRRRSPKVLDTINEEDQREALASSSSLKIDKFSISSPPSPMAASPTSPASSAAVNSKYFLNQVPVPLRPFSIFEH

TrEMBL top hitse value%identityAlignment
A0A0A0LYE6 Uncharacterized protein2.4e-3180.41Show/hide
Query:  MAATSRLARFISEACPPQVVSVMRRRSPKVLDTINEEDQREALASSSSLKIDKFSISSPPSPMAASPTSPASSAAVNSKYFLNQVPVPLRPFSIFEH
        MAATSRLARFISEACPPQ VSVMRRRSP+VLDTINEEDQREAL SSSS KIDKFS+ SPPSP        +S+AA+NSKYFL+QVPVPL PFSIFEH
Subjt:  MAATSRLARFISEACPPQVVSVMRRRSPKVLDTINEEDQREALASSSSLKIDKFSISSPPSPMAASPTSPASSAAVNSKYFLNQVPVPLRPFSIFEH

A0A314XQS6 Uncharacterized protein2.8e-1153.4Show/hide
Query:  MAATSRLARFISEACPPQVVSVMRRRSPKVLDTINEEDQ------REALASSSSLKIDKFSISSPPSPMAASPTSPASSAAVNSKYFLNQVPVPLRPFSI
        M A SRLARFI+E  PPQ VSVMR R+ KVLDTINEE++       ++L SSSS K    S SSPPS   AS  S A++A   SKYFL +V    R FS+
Subjt:  MAATSRLARFISEACPPQVVSVMRRRSPKVLDTINEEDQ------REALASSSSLKIDKFSISSPPSPMAASPTSPASSAAVNSKYFLNQVPVPLRPFSI

Query:  FEH
          H
Subjt:  FEH

A0A5A7UJX7 Uncharacterized protein4.4e-3384.54Show/hide
Query:  MAATSRLARFISEACPPQVVSVMRRRSPKVLDTINEEDQREALASSSSLKIDKFSISSPPSPMAASPTSPASSAAVNSKYFLNQVPVPLRPFSIFEH
        MAATSRLARFISEACPPQ VSVMRRRSPKVLDTINEEDQRE+LASSSS KIDKFS+SSPP     SP S A++AAVNSKYFL+QVPVPL PFSIFEH
Subjt:  MAATSRLARFISEACPPQVVSVMRRRSPKVLDTINEEDQREALASSSSLKIDKFSISSPPSPMAASPTSPASSAAVNSKYFLNQVPVPLRPFSIFEH

A0A5E4FYK5 PREDICTED: galactosyltransferase family4.0e-1050.51Show/hide
Query:  ATSRLARFISEACPPQVVSVMRRRSPKVLDTINEEDQREALASSSSLKIDKFS----ISSPPSPMAASPTSPASSAAVNSKYFLNQVPVPLRPFSIFEH
        A SRLARFI+E  PPQ VSVMR R+ KVLDTINEE++  A  S+ SL     S     S+P  P  AS  S A++A   S+YFL +V    R FS+F H
Subjt:  ATSRLARFISEACPPQVVSVMRRRSPKVLDTINEEDQREALASSSSLKIDKFS----ISSPPSPMAASPTSPASSAAVNSKYFLNQVPVPLRPFSIFEH

M5WKN5 Uncharacterized protein6.9e-1050.51Show/hide
Query:  ATSRLARFISEACPPQVVSVMRRRSPKVLDTINEEDQREALASSSSLKIDKFS----ISSPPSPMAASPTSPASSAAVNSKYFLNQVPVPLRPFSIFEH
        A SRLARFI+E  PPQ VSVMR R+ KVLDTI EE++  A  S+ SL     S     S+P  P  AS  S A++A   SKYFL +V    R FS+F H
Subjt:  ATSRLARFISEACPPQVVSVMRRRSPKVLDTINEEDQREALASSSSLKIDKFS----ISSPPSPMAASPTSPASSAAVNSKYFLNQVPVPLRPFSIFEH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30260.1 BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G21060.1)3.0e-1050Show/hide
Query:  ATSRLARFISEACPPQVVSVMRRRSPKVLDTINEEDQREALASSSSLKIDKFSISSP-PSPMAASPTSPASSAAVNSKYFLNQVPV
        ATSRLARFI+E  PPQ V+VMRRR+ KVLDTI EE++     S      +   ISSP  SP ++S +S ++SA+  S   LN+ PV
Subjt:  ATSRLARFISEACPPQVVSVMRRRSPKVLDTINEEDQREALASSSSLKIDKFSISSP-PSPMAASPTSPASSAAVNSKYFLNQVPV

AT4G21060.1 Galactosyltransferase family protein1.0e-0560.98Show/hide
Query:  ATSRLARFISEACPPQVVSVMRRR--SPKVLDTINEEDQRE
        ATSRLARF+SE  PPQ V+VMRR   + + LDTI EE+ +E
Subjt:  ATSRLARFISEACPPQVVSVMRRR--SPKVLDTINEEDQRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCACATCTCGATTGGCCAGGTTTATCAGCGAGGCTTGCCCTCCCCAAGTCGTCTCTGTGATGAGGCGCAGAAGCCCCAAAGTTCTAGACACCATTAACGAAGA
AGACCAAAGAGAAGCCCTAGCTTCCTCTTCCTCCTTGAAGATCGACAAATTCTCTATTTCTTCACCGCCGTCCCCCATGGCTGCGTCACCGACTTCTCCTGCTTCTTCCG
CCGCCGTTAATTCCAAATACTTTCTCAATCAAGTCCCTGTCCCCTTGAGACCTTTCTCCATTTTCGAACACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCACATCTCGATTGGCCAGGTTTATCAGCGAGGCTTGCCCTCCCCAAGTCGTCTCTGTGATGAGGCGCAGAAGCCCCAAAGTTCTAGACACCATTAACGAAGA
AGACCAAAGAGAAGCCCTAGCTTCCTCTTCCTCCTTGAAGATCGACAAATTCTCTATTTCTTCACCGCCGTCCCCCATGGCTGCGTCACCGACTTCTCCTGCTTCTTCCG
CCGCCGTTAATTCCAAATACTTTCTCAATCAAGTCCCTGTCCCCTTGAGACCTTTCTCCATTTTCGAACACTGA
Protein sequenceShow/hide protein sequence
MAATSRLARFISEACPPQVVSVMRRRSPKVLDTINEEDQREALASSSSLKIDKFSISSPPSPMAASPTSPASSAAVNSKYFLNQVPVPLRPFSIFEH