; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G009210 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G009210
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRemorin_C domain-containing protein
Genome locationchr02:8882212..8883747
RNA-Seq ExpressionLsi02G009210
SyntenyLsi02G009210
Gene Ontology termsGO:0042221 - response to chemical (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008444703.1 PREDICTED: uncharacterized protein LOC103487959 [Cucumis melo]6.4e-10388.79Show/hide
Query:  MDFVVFKPMVLVVDDFIEALKQFSFSTNNLGCIQSSVLKSIHGNMIIWCGIWAKRSIQNTKLLSEALLQN-LRKTSNMATLIDLSFFETYGGESMDGSNV
        + FVVFKPMVLVVDDF+EALKQFSFSTNNLGCIQ+ VLKSIHGNMIIWCGIWAKRSIQ+ +LLSE LLQ  + KTSNMATL+DLSFFE YGGESMDGS V
Subjt:  MDFVVFKPMVLVVDDFIEALKQFSFSTNNLGCIQSSVLKSIHGNMIIWCGIWAKRSIQNTKLLSEALLQN-LRKTSNMATLIDLSFFETYGGESMDGSNV

Query:  TKLTSKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGVSSGICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVV
         K TS+SIISMISIAAKCGDINDLSYACLAIFKSRFRKIEG++SGICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVV
Subjt:  TKLTSKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGVSSGICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVV

Query:  NVSDANMPNFKDLD
        NVSDAN+  FKDLD
Subjt:  NVSDANMPNFKDLD

XP_011648519.1 uncharacterized protein LOC105434510 isoform X2 [Cucumis sativus]6.4e-10388.32Show/hide
Query:  MDFVVFKPMVLVVDDFIEALKQFSFSTNNLGCIQSSVLKSIHGNMIIWCGIWAKRSIQNTKLLSEALLQN-LRKTSNMATLIDLSFFETYGGESMDGSNV
        + FVVFKPMVLVVDDF+EALKQFSFSTNNLGCIQ+ VLKSIHGNMIIWCGIW K+ IQN +LLSE LLQ  + KTSNMATL+DLSFFE YGGESMDGS V
Subjt:  MDFVVFKPMVLVVDDFIEALKQFSFSTNNLGCIQSSVLKSIHGNMIIWCGIWAKRSIQNTKLLSEALLQN-LRKTSNMATLIDLSFFETYGGESMDGSNV

Query:  TKLTSKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGVSSGICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVV
         K TSKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGV+SGICLKSQNRPTVVSL+VWNSPFYCYSWILNSDHLNSMLPYLD FSLCIKYDIYQVV
Subjt:  TKLTSKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGVSSGICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVV

Query:  NVSDANMPNFKDLD
        N+SDAN+PNFKDLD
Subjt:  NVSDANMPNFKDLD

XP_023520199.1 uncharacterized protein LOC111783503 isoform X1 [Cucurbita pepo subsp. pepo]9.2e-9481.13Show/hide
Query:  FVVFKPMVLVVDDFIEALKQFSFSTNNLGCIQSSVLKSIHGNMIIWCGIWAKRSIQNTKLLSEALLQNLRKTSNMATLIDLSFFETYGGESMDGSNVTKL
        FVVFKP+V V+D F+EALKQFSFST NLGCIQSSVLKSIHGNMIIWCGIWAKRSI+NT+LLSEA+L+NL K S+MAT+ID+SFFE YGG+SMDGS V KL
Subjt:  FVVFKPMVLVVDDFIEALKQFSFSTNNLGCIQSSVLKSIHGNMIIWCGIWAKRSIQNTKLLSEALLQNLRKTSNMATLIDLSFFETYGGESMDGSNVTKL

Query:  TSKSIISMISIAAKC-GDINDLSYACLAIFKSRFRKIEGVSSGICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVNV
        +   +ISMIS+AAK  GD+NDLSYACLAIFKSRF+KIEGV SGICLKSQNR TV+SLYVWNSPFYCYSWILNSDHLNSM+PYLDRFSLCIKYD++QVVNV
Subjt:  TSKSIISMISIAAKC-GDINDLSYACLAIFKSRFRKIEGVSSGICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVNV

Query:  SDANMPNFKDLD
         DAN+ +F DLD
Subjt:  SDANMPNFKDLD

XP_031738897.1 uncharacterized protein LOC105434510 isoform X1 [Cucumis sativus]1.6e-9877.27Show/hide
Query:  MDFVVFKPMVLVVDDFIEALKQFSFSTNNLGCIQSSVLKSIHGNMIIWCGIWAKRSIQNTKLLSEALLQ-----------------------------NL
        + FVVFKPMVLVVDDF+EALKQFSFSTNNLGCIQ+ VLKSIHGNMIIWCGIW K+ IQN +LLSE L+                               +
Subjt:  MDFVVFKPMVLVVDDFIEALKQFSFSTNNLGCIQSSVLKSIHGNMIIWCGIWAKRSIQNTKLLSEALLQ-----------------------------NL

Query:  RKTSNMATLIDLSFFETYGGESMDGSNVTKLTSKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGVSSGICLKSQNRPTVVSLYVWNSPFYCYSWI
         KTSNMATL+DLSFFE YGGESMDGS V K TSKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGV+SGICLKSQNRPTVVSL+VWNSPFYCYSWI
Subjt:  RKTSNMATLIDLSFFETYGGESMDGSNVTKLTSKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGVSSGICLKSQNRPTVVSLYVWNSPFYCYSWI

Query:  LNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANMPNFKDLD
        LNSDHLNSMLPYLD FSLCIKYDIYQVVN+SDAN+PNFKDLD
Subjt:  LNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANMPNFKDLD

XP_038895125.1 uncharacterized protein LOC120083436 [Benincasa hispida]2.0e-10993.49Show/hide
Query:  MDFVVFKPMVLVVDDFIEALKQFSFSTNNLGCIQSSVLKSIHGNMIIWCGIWAKRSIQNTKLLSEALLQNLRKTSNMATLIDLSFFETYGGESMDGSNVT
        + FVVFKPMVLV+DDF+EALKQFSFSTNNLGCIQSSVLKSIHGNMIIWCGIWAKRSIQNT+LLSE LLQ LRKTSNMATLIDLSFFE YGGESMDGSNV 
Subjt:  MDFVVFKPMVLVVDDFIEALKQFSFSTNNLGCIQSSVLKSIHGNMIIWCGIWAKRSIQNTKLLSEALLQNLRKTSNMATLIDLSFFETYGGESMDGSNVT

Query:  KLTSKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGVSSGICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVN
        K TSKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGVSSGICLKSQN  TVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVN
Subjt:  KLTSKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGVSSGICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVN

Query:  VSDANMPNFKDLDVK
        VSD N+PNFKDLDVK
Subjt:  VSDANMPNFKDLDVK

TrEMBL top hitse value%identityAlignment
A0A0A0LXV2 Uncharacterized protein3.1e-10388.32Show/hide
Query:  MDFVVFKPMVLVVDDFIEALKQFSFSTNNLGCIQSSVLKSIHGNMIIWCGIWAKRSIQNTKLLSEALLQN-LRKTSNMATLIDLSFFETYGGESMDGSNV
        + FVVFKPMVLVVDDF+EALKQFSFSTNNLGCIQ+ VLKSIHGNMIIWCGIW K+ IQN +LLSE LLQ  + KTSNMATL+DLSFFE YGGESMDGS V
Subjt:  MDFVVFKPMVLVVDDFIEALKQFSFSTNNLGCIQSSVLKSIHGNMIIWCGIWAKRSIQNTKLLSEALLQN-LRKTSNMATLIDLSFFETYGGESMDGSNV

Query:  TKLTSKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGVSSGICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVV
         K TSKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGV+SGICLKSQNRPTVVSL+VWNSPFYCYSWILNSDHLNSMLPYLD FSLCIKYDIYQVV
Subjt:  TKLTSKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGVSSGICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVV

Query:  NVSDANMPNFKDLD
        N+SDAN+PNFKDLD
Subjt:  NVSDANMPNFKDLD

A0A1S3BAH1 uncharacterized protein LOC1034879593.1e-10388.79Show/hide
Query:  MDFVVFKPMVLVVDDFIEALKQFSFSTNNLGCIQSSVLKSIHGNMIIWCGIWAKRSIQNTKLLSEALLQN-LRKTSNMATLIDLSFFETYGGESMDGSNV
        + FVVFKPMVLVVDDF+EALKQFSFSTNNLGCIQ+ VLKSIHGNMIIWCGIWAKRSIQ+ +LLSE LLQ  + KTSNMATL+DLSFFE YGGESMDGS V
Subjt:  MDFVVFKPMVLVVDDFIEALKQFSFSTNNLGCIQSSVLKSIHGNMIIWCGIWAKRSIQNTKLLSEALLQN-LRKTSNMATLIDLSFFETYGGESMDGSNV

Query:  TKLTSKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGVSSGICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVV
         K TS+SIISMISIAAKCGDINDLSYACLAIFKSRFRKIEG++SGICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVV
Subjt:  TKLTSKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGVSSGICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVV

Query:  NVSDANMPNFKDLD
        NVSDAN+  FKDLD
Subjt:  NVSDANMPNFKDLD

A0A6J1CGA3 uncharacterized protein LOC1110109557.9e-8374.64Show/hide
Query:  MDFVVFKPMVLVVDDFIEALKQFSFSTNNLGCIQSSVLKSIHGNMIIWCGIWAKRSIQNTKLLSEALLQNLRKTSNMATLIDLSFFETYGGESMDGSNVT
        + F+VFKPMV+VVDDFIEALK+FSF T NLGCIQSSVLKSIHGNMIIWCG WAKRSIQNT+ L+E LLQNL   S+MA+L DLSFF+ Y G+SMDGS+V 
Subjt:  MDFVVFKPMVLVVDDFIEALKQFSFSTNNLGCIQSSVLKSIHGNMIIWCGIWAKRSIQNTKLLSEALLQNLRKTSNMATLIDLSFFETYGGESMDGSNVT

Query:  KLTSKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGVSSGICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRF-SLCIKYDIYQVV
        K +S S ISMIS AAK GDI+DLSYACLAIFKSRFRK+EGV SGICLK ++RP+VVSLYVWNS F CYSWILNSDH+ SMLPYLDRF  LC+KYD++QVV
Subjt:  KLTSKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGVSSGICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRF-SLCIKYDIYQVV

Query:  NVSDANMPN
        +V+ ++  N
Subjt:  NVSDANMPN

A0A6J1EGH4 uncharacterized protein LOC111434118 isoform X12.9e-9380.57Show/hide
Query:  FVVFKPMVLVVDDFIEALKQFSFSTNNLGCIQSSVLKSIHGNMIIWCGIWAKRSIQNTKLLSEALLQNLRKTSNMATLIDLSFFETYGGESMDGSNVTKL
        FVVFKP+V VVD F+EALKQFSFST NLGCIQSSVLKSIHGNMIIWCGIWAKRSI+NT+LLSEA+L+NL K S+MAT+ID+SFFE YGG+SMDGS V K 
Subjt:  FVVFKPMVLVVDDFIEALKQFSFSTNNLGCIQSSVLKSIHGNMIIWCGIWAKRSIQNTKLLSEALLQNLRKTSNMATLIDLSFFETYGGESMDGSNVTKL

Query:  TSKSIISMISIAAKC-GDINDLSYACLAIFKSRFRKIEGVSSGICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVNV
        +   +ISMIS+AAK  GD+NDLSYACLAIFKSRF+KIEGV SG+CLKSQNR TV+SLYVWNSPFYCYSWILNSDHLNSM+PYLDRFSLCIKYD++QVVNV
Subjt:  TSKSIISMISIAAKC-GDINDLSYACLAIFKSRFRKIEGVSSGICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVNV

Query:  SDANMPNFKDL
         DAN+ +F DL
Subjt:  SDANMPNFKDL

A0A6J1KL93 uncharacterized protein LOC111495588 isoform X19.9e-9480.66Show/hide
Query:  FVVFKPMVLVVDDFIEALKQFSFSTNNLGCIQSSVLKSIHGNMIIWCGIWAKRSIQNTKLLSEALLQNLRKTSNMATLIDLSFFETYGGESMDGSNVTKL
        FVVFKP+V VVD F+EALKQFSFST NLGCIQSSVLKSIHGNMIIWCGIWAKRSI+NT+LLSEA+L+NL K S MAT+ID+SFFE YGG+SMDGS V + 
Subjt:  FVVFKPMVLVVDDFIEALKQFSFSTNNLGCIQSSVLKSIHGNMIIWCGIWAKRSIQNTKLLSEALLQNLRKTSNMATLIDLSFFETYGGESMDGSNVTKL

Query:  TSKSIISMISIAAKC-GDINDLSYACLAIFKSRFRKIEGVSSGICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVNV
        +   +ISMIS+AAK  GD+NDLSYACLAIFKSRF+KIEGV SGICLKSQNR TV+SLYVWNSPFYCYSWILNSDHLNSM+PYLDRFSLCIKYD++QVVNV
Subjt:  TSKSIISMISIAAKC-GDINDLSYACLAIFKSRFRKIEGVSSGICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVNV

Query:  SDANMPNFKDLD
         DAN+ +F DLD
Subjt:  SDANMPNFKDLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTTGTTGTATTCAAGCCAATGGTATTGGTTGTAGATGATTTCATTGAAGCTCTGAAACAATTCTCCTTCTCCACCAATAATCTTGGTTGTATTCAGAGTTCTGT
TCTGAAGAGCATCCATGGAAATATGATCATATGGTGTGGAATTTGGGCAAAGAGATCAATTCAAAACACAAAATTATTATCTGAAGCACTTCTTCAAAACTTGAGAAAAA
CATCAAACATGGCAACCTTAATCGATCTTAGCTTCTTCGAAACTTATGGTGGAGAGTCCATGGATGGTTCTAATGTTACAAAATTAACAAGTAAAAGCATCATATCAATG
ATTTCAATAGCTGCAAAATGTGGTGATATAAACGATCTATCCTACGCTTGCTTAGCAATTTTCAAGTCTCGATTCCGAAAGATCGAAGGCGTAAGCTCTGGAATTTGCTT
GAAATCTCAAAATAGGCCAACTGTTGTTTCACTCTATGTTTGGAATTCTCCATTTTATTGTTACTCATGGATATTGAACTCGGATCATTTGAACTCTATGTTACCTTATC
TTGATCGTTTTTCTCTTTGTATTAAATATGATATATATCAAGTGGTGAATGTAAGTGATGCAAATATGCCTAATTTTAAGGATTTGGATGTGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTTGTTGTATTCAAGCCAATGGTATTGGTTGTAGATGATTTCATTGAAGCTCTGAAACAATTCTCCTTCTCCACCAATAATCTTGGTTGTATTCAGAGTTCTGT
TCTGAAGAGCATCCATGGAAATATGATCATATGGTGTGGAATTTGGGCAAAGAGATCAATTCAAAACACAAAATTATTATCTGAAGCACTTCTTCAAAACTTGAGAAAAA
CATCAAACATGGCAACCTTAATCGATCTTAGCTTCTTCGAAACTTATGGTGGAGAGTCCATGGATGGTTCTAATGTTACAAAATTAACAAGTAAAAGCATCATATCAATG
ATTTCAATAGCTGCAAAATGTGGTGATATAAACGATCTATCCTACGCTTGCTTAGCAATTTTCAAGTCTCGATTCCGAAAGATCGAAGGCGTAAGCTCTGGAATTTGCTT
GAAATCTCAAAATAGGCCAACTGTTGTTTCACTCTATGTTTGGAATTCTCCATTTTATTGTTACTCATGGATATTGAACTCGGATCATTTGAACTCTATGTTACCTTATC
TTGATCGTTTTTCTCTTTGTATTAAATATGATATATATCAAGTGGTGAATGTAAGTGATGCAAATATGCCTAATTTTAAGGATTTGGATGTGAAATAAAGAAAAGAAAGG
GAGGGGAACAAAAAAGTGCAAATCTTGTGATGTGAAATAAAGAAAAGAAAGATACTAGAATAGTAAAGTTTTTGTGGTGATCTCT
Protein sequenceShow/hide protein sequence
MDFVVFKPMVLVVDDFIEALKQFSFSTNNLGCIQSSVLKSIHGNMIIWCGIWAKRSIQNTKLLSEALLQNLRKTSNMATLIDLSFFETYGGESMDGSNVTKLTSKSIISM
ISIAAKCGDINDLSYACLAIFKSRFRKIEGVSSGICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANMPNFKDLDVK