; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G009290 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G009290
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionglucan endo-1,3-beta-glucosidase 13
Genome locationchr02:9091960..9093724
RNA-Seq ExpressionLsi02G009290
SyntenyLsi02G009290
Gene Ontology termsGO:0009506 - plasmodesma (cellular component)
InterPro domainsIPR012946 - X8 domain
IPR044788 - Carbohydrate-binding X8 domain-containing protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135538.1 major pollen allergen Ole e 10 [Cucumis sativus]4.8e-5776.67Show/hide
Query:  MRKKIWVLEIILL-IQYSFLGESMAAEAGMPVTAAWTPPEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYA
        M+ KIWVLEI+LL + Y FLG +MAAEAGMPV AA  P EGNTTFI+GT+WCVAKAGVSQIDLQNALDWACG+GKADCRAIQKGG CY+PDTLLSHAS+A
Subjt:  MRKKIWVLEIILL-IQYSFLGESMAAEAGMPVTAAWTPPEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYA

Query:  FNSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDYSAS
        FNS+YQQNGNSDIACNFGGCA LTK++P            SYGKCDYSAS
Subjt:  FNSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDYSAS

XP_008444815.1 PREDICTED: glucan endo-1,3-beta-glucosidase 13 [Cucumis melo]9.7e-5876.51Show/hide
Query:  MRKKIWVLEIILLIQYSFLGESMAAEAGMPVTAAWTPPEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAF
        M+ KIWVLEI+L + Y FLG +MAAEAGMPV AA  P EGNTTFI+GT+WCVAK GVSQIDLQNALDWACG+GKADCRAIQKGG CY+PDTLLSHASYAF
Subjt:  MRKKIWVLEIILLIQYSFLGESMAAEAGMPVTAAWTPPEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAF

Query:  NSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDYSAS
        NS+YQQNGNSDIACNFGGCA LTK++P            SYGKCDYSAS
Subjt:  NSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDYSAS

XP_023001479.1 glucan endo-1,3-beta-glucosidase 13 isoform X2 [Cucurbita maxima]1.2e-5573.83Show/hide
Query:  MRKKIWVLEIILLIQYSFLGESMAAEAGMPVTAAWTPPEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAF
        MR +IWVLEI+LL+Q+ FLGE  AA AG+PVT  WTP EGN T  EG SWCVAK GVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAF
Subjt:  MRKKIWVLEIILLIQYSFLGESMAAEAGMPVTAAWTPPEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAF

Query:  NSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDYSAS
        N FY+QN NSD+ACNFGG A LT ++P            SYGKCDYSAS
Subjt:  NSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDYSAS

XP_023001480.1 glucan endo-1,3-beta-glucosidase 13 isoform X3 [Cucurbita maxima]3.1e-5674Show/hide
Query:  MRKKIWVLEIILLIQYSFLGESMAAEAGMPVTAAWTPPEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAF
        MR +IWVLEI+LL+Q+ FLGE  AA AG+PVT  WTP EGN T  EG SWCVAK GVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAF
Subjt:  MRKKIWVLEIILLIQYSFLGESMAAEAGMPVTAAWTPPEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAF

Query:  NSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDYSASR
        N FY+QN NSD+ACNFGG A LT ++P            SYGKCDYSASR
Subjt:  NSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDYSASR

XP_038895270.1 major pollen allergen Ole e 10 [Benincasa hispida]1.9e-6180Show/hide
Query:  MRKKIWVLEIILLIQYSFLGESMAAEAGMPV-TAAWTPPEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYA
        M++KIWVLEI+LL+ Y FLG   AAEAGM V TAA TPPEGNTTF++GTSWCVAKAG SQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYA
Subjt:  MRKKIWVLEIILLIQYSFLGESMAAEAGMPV-TAAWTPPEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYA

Query:  FNSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDYSAS
        FNS+YQQNGNSDIACNFGGCA LTK NP            SYGKCDYSAS
Subjt:  FNSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDYSAS

TrEMBL top hitse value%identityAlignment
A0A1S3BB84 glucan endo-1,3-beta-glucosidase 134.7e-5876.51Show/hide
Query:  MRKKIWVLEIILLIQYSFLGESMAAEAGMPVTAAWTPPEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAF
        M+ KIWVLEI+L + Y FLG +MAAEAGMPV AA  P EGNTTFI+GT+WCVAK GVSQIDLQNALDWACG+GKADCRAIQKGG CY+PDTLLSHASYAF
Subjt:  MRKKIWVLEIILLIQYSFLGESMAAEAGMPVTAAWTPPEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAF

Query:  NSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDYSAS
        NS+YQQNGNSDIACNFGGCA LTK++P            SYGKCDYSAS
Subjt:  NSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDYSAS

A0A6J1EKZ5 glucan endo-1,3-beta-glucosidase 13-like isoform X32.8e-5573.15Show/hide
Query:  MRKKIWVLEIILLIQYSFLGESMAAEAGMPVTAAWTPPEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAF
        M  KIWVLEI+LL+Q+ F+GE  AA AG+PVT  WTP EGN T  EG SWCVAK GVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAF
Subjt:  MRKKIWVLEIILLIQYSFLGESMAAEAGMPVTAAWTPPEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAF

Query:  NSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDYSAS
        N FY+QN NSD+ACNFGG A LT ++P            SYGKCDYSAS
Subjt:  NSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDYSAS

A0A6J1KLB1 glucan endo-1,3-beta-glucosidase 13 isoform X31.5e-5674Show/hide
Query:  MRKKIWVLEIILLIQYSFLGESMAAEAGMPVTAAWTPPEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAF
        MR +IWVLEI+LL+Q+ FLGE  AA AG+PVT  WTP EGN T  EG SWCVAK GVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAF
Subjt:  MRKKIWVLEIILLIQYSFLGESMAAEAGMPVTAAWTPPEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAF

Query:  NSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDYSASR
        N FY+QN NSD+ACNFGG A LT ++P            SYGKCDYSASR
Subjt:  NSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDYSASR

A0A6J1KMU9 glucan endo-1,3-beta-glucosidase 13 isoform X25.7e-5673.83Show/hide
Query:  MRKKIWVLEIILLIQYSFLGESMAAEAGMPVTAAWTPPEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAF
        MR +IWVLEI+LL+Q+ FLGE  AA AG+PVT  WTP EGN T  EG SWCVAK GVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAF
Subjt:  MRKKIWVLEIILLIQYSFLGESMAAEAGMPVTAAWTPPEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAF

Query:  NSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDYSAS
        N FY+QN NSD+ACNFGG A LT ++P            SYGKCDYSAS
Subjt:  NSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDYSAS

A0A6J1KQN0 glucan endo-1,3-beta-glucosidase 13 isoform X15.7e-5673.83Show/hide
Query:  MRKKIWVLEIILLIQYSFLGESMAAEAGMPVTAAWTPPEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAF
        MR +IWVLEI+LL+Q+ FLGE  AA AG+PVT  WTP EGN T  EG SWCVAK GVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAF
Subjt:  MRKKIWVLEIILLIQYSFLGESMAAEAGMPVTAAWTPPEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAF

Query:  NSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDYSAS
        N FY+QN NSD+ACNFGG A LT ++P            SYGKCDYSAS
Subjt:  NSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDYSAS

SwissProt top hitse value%identityAlignment
P52409 Glucan endo-1,3-beta-glucosidase6.4e-2045Show/hide
Query:  GTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDY
        G  WCVAK G +  DLQN +++ACG    DC+ IQ GG C+ P++L +HASY  N++YQ NG++D+AC+F G  I+T  +P            SYG C Y
Subjt:  GTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDY

Q8VYE5 Glucan endo-1,3-beta-glucosidase 126.2e-2338.46Show/hide
Query:  FLGESMAAEAGMPVTAAWTPPEGNTTFIEGTS--------------WCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNSF
        F GE+    +    T   +P   ++  I G S              WC+A +  S  +LQ ALDWACG G  DC A+Q   PC++PDT+LSHASYAFN++
Subjt:  FLGESMAAEAGMPVTAAWTPPEGNTTFIEGTS--------------WCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNSF

Query:  YQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDY
        YQQ+G S I C+F G ++   ++P            SYG C Y
Subjt:  YQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDY

Q9C7U5 Glucan endo-1,3-beta-glucosidase 22.4e-1943.14Show/hide
Query:  SWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDYSA
        ++C A+ G     LQ ALDWACG GK DC  I++G  CY+PD +++HA+YAF+++Y Q GN+  ACNF G A +T  +P            S+G C ++ 
Subjt:  SWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDYSA

Query:  SR
        SR
Subjt:  SR

Q9FJU9 Glucan endo-1,3-beta-glucosidase 137.3e-2446.73Show/hide
Query:  GNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVE
        G  +     SWC+A +  S+ DL+ ALDWACG G  DC AIQ   PC+QPDTL+SHAS+ FNS++QQN  +D+AC+FGG  +   ++P            
Subjt:  GNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVE

Query:  SYGKCDY
        SY KC Y
Subjt:  SYGKCDY

Q9M2K6 PLASMODESMATA CALLOSE-BINDING PROTEIN 59.2e-1939.01Show/hide
Query:  IILLIQYSFLGESMAAEAGMPVTAAWTPPEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNSFYQQNGN
        I+ L Q S L  S+ A     +    T   G    I+   WCVAK       LQ A++WACG G ADC  IQ+GGPC  P  +   AS+ FN++Y +NG 
Subjt:  IILLIQYSFLGESMAAEAGMPVTAAWTPPEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNSFYQQNGN

Query:  SDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDYSASR
         D ACNF   A LT  NPS+            G C Y +S+
Subjt:  SDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDYSASR

Arabidopsis top hitse value%identityAlignment
AT1G09460.1 Carbohydrate-binding X8 domain superfamily protein5.7e-2453Show/hide
Query:  MPVTAAWTPPEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGCAILTKQNPS
        +PV     P   N+  + G SWCVAK G SQ+ LQ ALD+ACG+  ADC  +Q+GG CY P +L SHAS+AFNS+YQ+N  S  +C+FGG A L   NPS
Subjt:  MPVTAAWTPPEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGCAILTKQNPS

AT4G05430.1 Carbohydrate-binding X8 domain superfamily protein2.2e-3657.52Show/hide
Query:  PEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRL
        P+GNTTF+EGT+WCVA+ G +Q +LQ ALDWACG+G+ DC  I++ G CY+PDT++SHAS+AFN++YQ NGN+ IAC FGG A  TK NP          
Subjt:  PEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRL

Query:  VESYGKCDYSASR
          SYGKC Y AS+
Subjt:  VESYGKCDYSASR

AT4G29360.1 O-Glycosyl hydrolases family 17 protein4.4e-2438.46Show/hide
Query:  FLGESMAAEAGMPVTAAWTPPEGNTTFIEGTS--------------WCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNSF
        F GE+    +    T   +P   ++  I G S              WC+A +  S  +LQ ALDWACG G  DC A+Q   PC++PDT+LSHASYAFN++
Subjt:  FLGESMAAEAGMPVTAAWTPPEGNTTFIEGTS--------------WCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNSF

Query:  YQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDY
        YQQ+G S I C+F G ++   ++P            SYG C Y
Subjt:  YQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDY

AT4G29360.2 O-Glycosyl hydrolases family 17 protein2.6e-2441.27Show/hide
Query:  FLGESMAAEAGMPVTAAWTPPEGNTTFIEGTS--------------WCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNSF
        F GE+    +    T   +P   ++  I G S              WC+A +  S  +LQ ALDWACG G  DC A+Q   PC++PDT+LSHASYAFN++
Subjt:  FLGESMAAEAGMPVTAAWTPPEGNTTFIEGTS--------------WCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNSF

Query:  YQQNGNSDIACNFGGCAILTKQNPSK
        YQQ+G S I C+F G ++   ++PSK
Subjt:  YQQNGNSDIACNFGGCAILTKQNPSK

AT5G56590.1 O-Glycosyl hydrolases family 17 protein5.2e-2546.73Show/hide
Query:  GNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVE
        G  +     SWC+A +  S+ DL+ ALDWACG G  DC AIQ   PC+QPDTL+SHAS+ FNS++QQN  +D+AC+FGG  +   ++P            
Subjt:  GNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGCAILTKQNPSKVSLSSIRLVE

Query:  SYGKCDY
        SY KC Y
Subjt:  SYGKCDY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAAAAAAATCTGGGTTTTGGAGATCATCCTCCTTATACAATATTCCTTTCTGGGAGAATCGATGGCGGCGGAGGCGGGAATGCCGGTGACGGCGGCCTGGACGCC
GCCGGAAGGAAACACGACGTTTATAGAGGGAACTTCGTGGTGCGTAGCAAAGGCTGGAGTTTCGCAGATTGATCTGCAGAATGCGCTGGATTGGGCTTGTGGATTGGGAA
AGGCAGATTGCAGAGCCATTCAAAAGGGAGGACCTTGTTATCAACCGGATACGCTCTTGTCTCATGCTTCTTATGCATTTAATAGCTTCTATCAGCAAAATGGCAACTCT
GATATTGCTTGCAATTTTGGTGGCTGTGCCATTTTGACCAAACAAAACCCAAGTAAAGTTTCTCTCTCTTCAATAAGATTGGTGGAAAGTTATGGAAAATGTGATTATTC
AGCATCCAGGTAA
mRNA sequenceShow/hide mRNA sequence
TTTCATTTGAAGAAACTAATTATTCTTCACCCCCAAAAGAAAAAAATTCTTTCATTTATATAACCCCCATTTCCTCCTTCATTTTCACCCTCCAACTTCCAAACCACAAA
GAAATTTTTGTAAAAAAAACCCATAAAAATGAGAAAAAAAATCTGGGTTTTGGAGATCATCCTCCTTATACAATATTCCTTTCTGGGAGAATCGATGGCGGCGGAGGCGG
GAATGCCGGTGACGGCGGCCTGGACGCCGCCGGAAGGAAACACGACGTTTATAGAGGGAACTTCGTGGTGCGTAGCAAAGGCTGGAGTTTCGCAGATTGATCTGCAGAAT
GCGCTGGATTGGGCTTGTGGATTGGGAAAGGCAGATTGCAGAGCCATTCAAAAGGGAGGACCTTGTTATCAACCGGATACGCTCTTGTCTCATGCTTCTTATGCATTTAA
TAGCTTCTATCAGCAAAATGGCAACTCTGATATTGCTTGCAATTTTGGTGGCTGTGCCATTTTGACCAAACAAAACCCAAGTAAAGTTTCTCTCTCTTCAATAAGATTGG
TGGAAAGTTATGGAAAATGTGATTATTCAGCATCCAGGTAA
Protein sequenceShow/hide protein sequence
MRKKIWVLEIILLIQYSFLGESMAAEAGMPVTAAWTPPEGNTTFIEGTSWCVAKAGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNSFYQQNGNS
DIACNFGGCAILTKQNPSKVSLSSIRLVESYGKCDYSASR