CuGenDBv2

Gene ID	Lsi02G009630
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	myosin heavy chain, non-muscle-like
Genome location	chr02:9601404..9602801
RNA-Seq Expression	Lsi02G009630
Synteny	Lsi02G009630
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0063745.1 uncharacterized protein E6C27_scaffold1290G00310 [Cucumis melo var. makuwa]

1.7e-52

88.8

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Query:  MELLTSSVKKGLEIVILLGQLGRFGVDAGGFEDGGVKILRSNLSAFLCLDTTIKSGLFVQIATVSALLGLLPFDFETIVQDKVSYLASPSHYAEVNLIKT
        M+L+ SS KKG  IVILLGQLGR GVDAGGF+DGGVKILR NLSAFLCLDTTIKSGL VQIATVSALLGLLPFDFETI+QDKVSYLAS SHYAEVNLIKT
Subjt:  MELLTSSVKKGLEIVILLGQLGRFGVDAGGFEDGGVKILRSNLSAFLCLDTTIKSGLFVQIATVSALLGLLPFDFETIVQDKVSYLASPSHYAEVNLIKT

Query:  WFSLLSPKQKELSRNILQVAVCDVS
        WFSLLSPKQKELSRNILQV VC+VS
Subjt:  WFSLLSPKQKELSRNILQVAVCDVS

KAA0066079.1 uncharacterized protein E6C27_scaffold21G00640 [Cucumis melo var. makuwa]

2.5e-51

86.4

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Query:  MELLTSSVKKGLEIVILLGQLGRFGVDAGGFEDGGVKILRSNLSAFLCLDTTIKSGLFVQIATVSALLGLLPFDFETIVQDKVSYLASPSHYAEVNLIKT
        M+LL SS KKG  IV+LLGQLGR GVDAGGF+DGGVKILR NLSAFLCL+TTIKSGL VQIATVSAL+GLLPFDFETIVQDKVSYLAS SHYAE+NLIKT
Subjt:  MELLTSSVKKGLEIVILLGQLGRFGVDAGGFEDGGVKILRSNLSAFLCLDTTIKSGLFVQIATVSALLGLLPFDFETIVQDKVSYLASPSHYAEVNLIKT

Query:  WFSLLSPKQKELSRNILQVAVCDVS
        WFSLLSPKQKE SRNILQV VC+VS
Subjt:  WFSLLSPKQKELSRNILQVAVCDVS

TYJ99817.1 uncharacterized protein E5676_scaffold446G00190 [Cucumis melo var. makuwa]

2.5e-51

86.4

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Query:  MELLTSSVKKGLEIVILLGQLGRFGVDAGGFEDGGVKILRSNLSAFLCLDTTIKSGLFVQIATVSALLGLLPFDFETIVQDKVSYLASPSHYAEVNLIKT
        M+LL SS KKG  IV+LLGQLGR GVDAGGF+DGGVKILR NLSAFLCL+TTIKSGL VQIATVSAL+GLLPFDFETIVQDKVSYLAS SHYAE+NLIKT
Subjt:  MELLTSSVKKGLEIVILLGQLGRFGVDAGGFEDGGVKILRSNLSAFLCLDTTIKSGLFVQIATVSALLGLLPFDFETIVQDKVSYLASPSHYAEVNLIKT

Query:  WFSLLSPKQKELSRNILQVAVCDVS
        WFSLLSPKQKE SRNILQV VC+VS
Subjt:  WFSLLSPKQKELSRNILQVAVCDVS

XP_008445605.1 PREDICTED: uncharacterized protein LOC103488580 [Cucumis melo]

1.7e-52

88.8

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Query:  MELLTSSVKKGLEIVILLGQLGRFGVDAGGFEDGGVKILRSNLSAFLCLDTTIKSGLFVQIATVSALLGLLPFDFETIVQDKVSYLASPSHYAEVNLIKT
        M+L+ SS KKG  IVILLGQLGR GVDAGGF+DGGVKILR NLSAFLCLDTTIKSGL VQIATVSALLGLLPFDFETI+QDKVSYLAS SHYAEVNLIKT
Subjt:  MELLTSSVKKGLEIVILLGQLGRFGVDAGGFEDGGVKILRSNLSAFLCLDTTIKSGLFVQIATVSALLGLLPFDFETIVQDKVSYLASPSHYAEVNLIKT

Query:  WFSLLSPKQKELSRNILQVAVCDVS
        WFSLLSPKQKELSRNILQV VC+VS
Subjt:  WFSLLSPKQKELSRNILQVAVCDVS

XP_011658982.1 restin homolog [Cucumis sativus]

7.8e-53

88.8

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Query:  MELLTSSVKKGLEIVILLGQLGRFGVDAGGFEDGGVKILRSNLSAFLCLDTTIKSGLFVQIATVSALLGLLPFDFETIVQDKVSYLASPSHYAEVNLIKT
        M+L+ SS KKG  IV+LLGQLGR GVDAGGF+DGGVKILRSNLSAFLCLDTTIKSGL VQIATVSALLGLLPFDFETIVQDKVSYLA+ SHYAEVNLIKT
Subjt:  MELLTSSVKKGLEIVILLGQLGRFGVDAGGFEDGGVKILRSNLSAFLCLDTTIKSGLFVQIATVSALLGLLPFDFETIVQDKVSYLASPSHYAEVNLIKT

Query:  WFSLLSPKQKELSRNILQVAVCDVS
        WFSLLSPKQKELSRNILQV VC+VS
Subjt:  WFSLLSPKQKELSRNILQVAVCDVS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LYH6 Uncharacterized protein

3.8e-53

88.8

Show/hide

Query:  MELLTSSVKKGLEIVILLGQLGRFGVDAGGFEDGGVKILRSNLSAFLCLDTTIKSGLFVQIATVSALLGLLPFDFETIVQDKVSYLASPSHYAEVNLIKT
        M+L+ SS KKG  IV+LLGQLGR GVDAGGF+DGGVKILRSNLSAFLCLDTTIKSGL VQIATVSALLGLLPFDFETIVQDKVSYLA+ SHYAEVNLIKT
Subjt:  MELLTSSVKKGLEIVILLGQLGRFGVDAGGFEDGGVKILRSNLSAFLCLDTTIKSGLFVQIATVSALLGLLPFDFETIVQDKVSYLASPSHYAEVNLIKT

Query:  WFSLLSPKQKELSRNILQVAVCDVS
        WFSLLSPKQKELSRNILQV VC+VS
Subjt:  WFSLLSPKQKELSRNILQVAVCDVS

A0A1S3BD44 uncharacterized protein LOC103488580

8.4e-53

88.8

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Query:  MELLTSSVKKGLEIVILLGQLGRFGVDAGGFEDGGVKILRSNLSAFLCLDTTIKSGLFVQIATVSALLGLLPFDFETIVQDKVSYLASPSHYAEVNLIKT
        M+L+ SS KKG  IVILLGQLGR GVDAGGF+DGGVKILR NLSAFLCLDTTIKSGL VQIATVSALLGLLPFDFETI+QDKVSYLAS SHYAEVNLIKT
Subjt:  MELLTSSVKKGLEIVILLGQLGRFGVDAGGFEDGGVKILRSNLSAFLCLDTTIKSGLFVQIATVSALLGLLPFDFETIVQDKVSYLASPSHYAEVNLIKT

Query:  WFSLLSPKQKELSRNILQVAVCDVS
        WFSLLSPKQKELSRNILQV VC+VS
Subjt:  WFSLLSPKQKELSRNILQVAVCDVS

A0A5A7VD00 Uncharacterized protein

8.4e-53

88.8

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Query:  MELLTSSVKKGLEIVILLGQLGRFGVDAGGFEDGGVKILRSNLSAFLCLDTTIKSGLFVQIATVSALLGLLPFDFETIVQDKVSYLASPSHYAEVNLIKT
        M+L+ SS KKG  IVILLGQLGR GVDAGGF+DGGVKILR NLSAFLCLDTTIKSGL VQIATVSALLGLLPFDFETI+QDKVSYLAS SHYAEVNLIKT
Subjt:  MELLTSSVKKGLEIVILLGQLGRFGVDAGGFEDGGVKILRSNLSAFLCLDTTIKSGLFVQIATVSALLGLLPFDFETIVQDKVSYLASPSHYAEVNLIKT

Query:  WFSLLSPKQKELSRNILQVAVCDVS
        WFSLLSPKQKELSRNILQV VC+VS
Subjt:  WFSLLSPKQKELSRNILQVAVCDVS

A0A5A7VL79 Uncharacterized protein

1.2e-51

86.4

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Query:  MELLTSSVKKGLEIVILLGQLGRFGVDAGGFEDGGVKILRSNLSAFLCLDTTIKSGLFVQIATVSALLGLLPFDFETIVQDKVSYLASPSHYAEVNLIKT
        M+LL SS KKG  IV+LLGQLGR GVDAGGF+DGGVKILR NLSAFLCL+TTIKSGL VQIATVSAL+GLLPFDFETIVQDKVSYLAS SHYAE+NLIKT
Subjt:  MELLTSSVKKGLEIVILLGQLGRFGVDAGGFEDGGVKILRSNLSAFLCLDTTIKSGLFVQIATVSALLGLLPFDFETIVQDKVSYLASPSHYAEVNLIKT

Query:  WFSLLSPKQKELSRNILQVAVCDVS
        WFSLLSPKQKE SRNILQV VC+VS
Subjt:  WFSLLSPKQKELSRNILQVAVCDVS

A0A5D3BL11 Uncharacterized protein

1.2e-51

86.4

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Query:  MELLTSSVKKGLEIVILLGQLGRFGVDAGGFEDGGVKILRSNLSAFLCLDTTIKSGLFVQIATVSALLGLLPFDFETIVQDKVSYLASPSHYAEVNLIKT
        M+LL SS KKG  IV+LLGQLGR GVDAGGF+DGGVKILR NLSAFLCL+TTIKSGL VQIATVSAL+GLLPFDFETIVQDKVSYLAS SHYAE+NLIKT
Subjt:  MELLTSSVKKGLEIVILLGQLGRFGVDAGGFEDGGVKILRSNLSAFLCLDTTIKSGLFVQIATVSALLGLLPFDFETIVQDKVSYLASPSHYAEVNLIKT

Query:  WFSLLSPKQKELSRNILQVAVCDVS
        WFSLLSPKQKE SRNILQV VC+VS
Subjt:  WFSLLSPKQKELSRNILQVAVCDVS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G34780.1 maternal effect embryo arrest 22

1.5e-17

46.85

Show/hide

Query:  IVILLGQLGRFGVDAGGFEDGGVKILRSNLSAFLCLDTTIKSGLFVQIATVSALLGLLPFDFETIVQDKVSYL---ASPSHYAEVNLIKTWFSLLSPKQK
        IV LLGQL   GVDAGG+E+ G+  LR  LSAFL  +TT+K+G  VQIATVS+LL  L   F    QDK + +      S    VN++  W SLLS +Q+
Subjt:  IVILLGQLGRFGVDAGGFEDGGVKILRSNLSAFLCLDTTIKSGLFVQIATVSALLGLLPFDFETIVQDKVSYL---ASPSHYAEVNLIKTWFSLLSPKQK

Query:  ELSRNILQVAV
          +   LQ  V
Subjt:  ELSRNILQVAV

AT2G34780.2 maternal effect embryo arrest 22

1.5e-17

46.85

Show/hide

Query:  IVILLGQLGRFGVDAGGFEDGGVKILRSNLSAFLCLDTTIKSGLFVQIATVSALLGLLPFDFETIVQDKVSYL---ASPSHYAEVNLIKTWFSLLSPKQK
        IV LLGQL   GVDAGG+E+ G+  LR  LSAFL  +TT+K+G  VQIATVS+LL  L   F    QDK + +      S    VN++  W SLLS +Q+
Subjt:  IVILLGQLGRFGVDAGGFEDGGVKILRSNLSAFLCLDTTIKSGLFVQIATVSALLGLLPFDFETIVQDKVSYL---ASPSHYAEVNLIKTWFSLLSPKQK

Query:  ELSRNILQVAV
          +   LQ  V
Subjt:  ELSRNILQVAV

Sequences

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CDS sequence

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mRNA sequence

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ATGGAATTATTGACGTCATCCGTTAAGAAGGGTCTTGAAATTGTGATTCTTCTTGGTCAGCTTGGAAGGTTTGGCGTAGATGCTGGAGGCTTTGAAGATGGAGGAGTTAA
GATTTTGAGATCCAATCTATCAGCATTTCTTTGCTTGGACACTACCATTAAATCTGGTCTCTTTGTTCAAATTGCTACTGTTTCTGCCTTGTTAGGCCTTCTCCCTTTTG
ATTTTGAAACAATCGTTCAAGATAAAGTAAGCTATCTAGCCTCTCCGAGTCATTATGCTGAGGTTAACTTGATAAAGACATGGTTTTCTTTATTAAGCCCGAAACAGAAG
GAGTTGTCACGTAACATTTTACAAGTTGCTGTTTGCGATGTAAGCTGATATTTGATTTCCTTTCTTGATGCAACCTTAACCCAACTGAAGTTGCGACCTGTTTCTGAGGC
TTGGACAAGAGTTATCACAACCAATTTTTGAAGACTCACCTGTAGATATTTAGGAAATTGATAATTTGTGCATATCTGTAGCCTAGTCTTGTTTTCTTCTTCACTTTAAA
GAGGGATAGGATACATATAGTTTATGTACTGTTTTCACTGAGTACATTAATATTCTAATCAAATTTTGTACATTATCCCAGTAACTTCCAGTTTCATCTGCTCAACTATA
TGTGCATTTGCTAGAATTTTGCTGGACTTTTATATCAAAGGTGTCTTAAGTTTTGGC

Protein sequence

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MELLTSSVKKGLEIVILLGQLGRFGVDAGGFEDGGVKILRSNLSAFLCLDTTIKSGLFVQIATVSALLGLLPFDFETIVQDKVSYLASPSHYAEVNLIKTWFSLLSPKQK
ELSRNILQVAVCDVS

Lsi02G009630 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome