CuGenDBv2

Gene ID	Lsi02G009880
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	twinkle homolog protein, chloroplastic/mitochondrial
Genome location	chr02:9957267..9998454
RNA-Seq Expression	Lsi02G009880
Synteny	Lsi02G009880
Gene Ontology terms	GO:0006260 - DNA replication (biological process) GO:0032508 - DNA duplex unwinding (biological process) GO:0003697 - single-stranded DNA binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0043139 - 5'-3' DNA helicase activity (molecular function)
InterPro domains	IPR006171 - TOPRIM domain IPR007694 - DNA helicase, DnaB-like, C-terminal IPR027032 - Twinkle-like protein IPR027417 - P-loop containing nucleoside triphosphate hydrolase IPR034154 - Archaeal primase DnaG/twinkle, TOPRIM domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7019451.1 Twinkle-like protein, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.3e-269

80.98

Show/hide

Query:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRNLGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALIS
        GG AVWMCFRAKCGWKGRTLA+ADGRSS++  G + LKQ KRKITVESLQLEPLCDELVAYFAERLISK+TLL+NSVMQKRSNNQI+IAFTY RRGALIS
Subjt:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRNLGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALIS

Query:  CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDGD
        CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPP  SQKDVPP DQDTKYQYLWNCKDYL+KASRIILATDGD
Subjt:  CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDGD

Query:  PPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLFNFKDYFDEIDAYYHKQFGNEFG
         PGQALAEEIARRVGRE              RCWRVKWPKKNE +HFKDANEVLMYLGPEAL+EVVDNAEL+PIRGLFNFK+YFDEID+YYHK+ GNEFG
Subjt:  PPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLFNFKDYFDEIDAYYHKQFGNEFG

Query:  ASTGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNASTGWKFVLCSMENKVRDHARKLLEKRIKKPFFA------------------------
          TGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLN S+GWKFVLCSMEN+VR+HARKLLEKRIKKPFF+                        
Subjt:  ASTGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNASTGWKFVLCSMENKVRDHARKLLEKRIKKPFFA------------------------

Query:  ----ARCDNESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTK--------------------LQNWSGGAPNMYDISGSA
            ARC+NESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRP +QTETEYVSQMLTK                    LQNWSGGAPNMYDISGSA
Subjt:  ----ARCDNESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTK--------------------LQNWSGGAPNMYDISGSA

Query:  HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESIRIEDQLSNQPY
        HFINKCDNGIVIHRNRDP+SGPIDL+QVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDES RIE +L    +
Subjt:  HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESIRIEDQLSNQPY

XP_022142395.1 twinkle homolog protein, chloroplastic/mitochondrial isoform X2 [Momordica charantia]

1.3e-269

81.69

Show/hide

Query:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRNLGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALIS
        GG AVW+CFRAKCGWKGRTLA+ADGRSSY +LG VAL + KRKITVESLQLEPLCDELVAYFAERLISKNTLL+NSVMQKRS+NQIAIAFTY+R G L+S
Subjt:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRNLGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALIS

Query:  CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDGD
        CKYRDVNKKFWQEANTEKIFYGLD IDGASDIIIVEGE+DKLSM EAGFHNCVSVPDGAPP VSQKDVPP D+DTKYQYLWNCK+YL+KASRIILATDGD
Subjt:  CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDGD

Query:  PPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLFNFKDYFDEIDAYYHKQFGNEFG
        PPGQALAEEIARRVGRE              RCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAEL+PIRGLF+FKDYFDEIDAYY K+FGNEFG
Subjt:  PPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLFNFKDYFDEIDAYYHKQFGNEFG

Query:  ASTGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNASTGWKFVLCSMENKVRDHARKLLEKRIKKPFFAA-----------------------
        ASTGWK LN LYNVVPGELTIVTGIPNSGKSEWIDALLCNLNAS GWKFVLCSMENKVR+HARKLLEKRIKKPFF A                       
Subjt:  ASTGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNASTGWKFVLCSMENKVRDHARKLLEKRIKKPFFAA-----------------------

Query:  -----RCDNESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTK--------------------LQNWSGGAPNMYDISGSA
             RC+NESLPSINWVLDLAKAAVLRHGV+GLVIDPYNELDHQRPPNQTETEYVSQMLTK                    LQNWSGGAPNMYDISGSA
Subjt:  -----RCDNESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTK--------------------LQNWSGGAPNMYDISGSA

Query:  HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESIRIEDQL
        HFINKCDNGIVIHRNRDP+SGP+DLLQVCVRKVRNKVAGTIGEA+L YNRVTGEFLD DE  RIE QL
Subjt:  HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESIRIEDQL

XP_022927084.1 twinkle homolog protein, chloroplastic/mitochondrial isoform X1 [Cucurbita moschata]

1.3e-269

80.98

Show/hide

Query:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRNLGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALIS
        GG AVWMCFRAKCGWKGRTLA+ADGRSS++  G + LKQ KRKITVESLQLEPLCDELVAYFAERLISK+TLL+NSVMQKRSNNQI+IAFTY RRGALIS
Subjt:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRNLGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALIS

Query:  CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDGD
        CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPP  SQKDVPP DQDTKYQYLWNCKDYL+KASRIILATDGD
Subjt:  CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDGD

Query:  PPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLFNFKDYFDEIDAYYHKQFGNEFG
         PGQALAEEIARRVGRE              RCWRVKWPKKNE +HFKDANEVLMYLGPEAL+EVVDNAEL+PIRGLFNFK+YFDEID+YYHK+ GNEFG
Subjt:  PPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLFNFKDYFDEIDAYYHKQFGNEFG

Query:  ASTGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNASTGWKFVLCSMENKVRDHARKLLEKRIKKPFFA------------------------
          TGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLN S+GWKFVLCSMEN+VR+HARKLLEKRIKKPFF+                        
Subjt:  ASTGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNASTGWKFVLCSMENKVRDHARKLLEKRIKKPFFA------------------------

Query:  ----ARCDNESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTK--------------------LQNWSGGAPNMYDISGSA
            ARC+NESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRP +QTETEYVSQMLTK                    LQNWSGGAPNMYDISGSA
Subjt:  ----ARCDNESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTK--------------------LQNWSGGAPNMYDISGSA

Query:  HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESIRIEDQLSNQPY
        HFINKCDNGIVIHRNRDP+SGPIDL+QVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDES RIE +L    +
Subjt:  HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESIRIEDQLSNQPY

XP_023000969.1 twinkle homolog protein, chloroplastic/mitochondrial [Cucurbita maxima]

1.1e-270

82.01

Show/hide

Query:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRNLGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALIS
        GG AVWMCFRAKCGWKGRTLA+ADGR S+++ G + LKQ KRKITVESLQLEPLCDELVAYFAERLISK+TLL+NSVMQKRSNNQI+IAFTY RRGALIS
Subjt:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRNLGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALIS

Query:  CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDGD
        CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPP  SQKDVPP DQDTKYQYLWNCKDYL+KASRIILATDGD
Subjt:  CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDGD

Query:  PPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLFNFKDYFDEIDAYYHKQFGNEFG
        PPGQALAEEIARRVGRE              RCWRVKWPKKNE +HFKDANEVLMYLGPEAL+EVVDNAEL+PIRGLFNFK+YFD+ID+YYHK+ GNEFG
Subjt:  PPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLFNFKDYFDEIDAYYHKQFGNEFG

Query:  ASTGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNASTGWKFVLCSMENKVRDHARKLLEKRIKKPFFAA-----------------------
          TGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLN S+GWKFVLCSMEN+VR+HARKLLEKRIKKPFF+A                       
Subjt:  ASTGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNASTGWKFVLCSMENKVRDHARKLLEKRIKKPFFAA-----------------------

Query:  -----RCDNESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTK--------------------LQNWSGGAPNMYDISGSA
             RC+NESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRP NQTETEYVSQMLTK                    LQNWSGGAPNMYDISGSA
Subjt:  -----RCDNESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTK--------------------LQNWSGGAPNMYDISGSA

Query:  HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESIRIEDQ
        HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDES RIE +
Subjt:  HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESIRIEDQ

XP_038894379.1 twinkle homolog protein, chloroplastic/mitochondrial [Benincasa hispida]

3.1e-276

84.07

Show/hide

Query:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRNLGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALIS
        GG A+WMCFRAKCGWKGRTLA+ADG SSYRNLG VALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLL+NSVMQKR NNQI IAFTYYR GALIS
Subjt:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRNLGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALIS

Query:  CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDGD
        CKYRDVNKKFWQEANTEKIFYGLDDI G SDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPP VS+ DVPPADQD KYQYLWNCKDYLNKASRIILATDGD
Subjt:  CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDGD

Query:  PPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLFNFKDYFDEIDAYYHKQFGNEFG
        PPGQALAEEIARRVGRE              RCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLF+FKDYFDEIDAYYHK+FGNEFG
Subjt:  PPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLFNFKDYFDEIDAYYHKQFGNEFG

Query:  ASTGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNASTGWKFVLCSMENKVRDHARKLLEKRIKKPFFAA-----------------------
         STGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNAS GWKF+LCSMENKVRDHARKLLEK IKKPFFAA                       
Subjt:  ASTGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNASTGWKFVLCSMENKVRDHARKLLEKRIKKPFFAA-----------------------

Query:  -----RCDNESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTK--------------------LQNWSGGAPNMYDISGSA
             RC+NESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTK                    LQNWSGGAPNMYDISGSA
Subjt:  -----RCDNESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTK--------------------LQNWSGGAPNMYDISGSA

Query:  HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESIRIE
        HFINKCDNGIVIHRNRDPD GPIDLLQV VRKVRNKVAGTIGEAYLAYNR+TGEF+DTD+S+RIE
Subjt:  HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESIRIE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LYM8 Uncharacterized protein

1.5e-255

77.52

Show/hide

Query:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRNLGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALIS
        GG AVW CFR KCGWKG TLA+ DGRSSY++LG VALKQN RKITVESLQLEPLCDELV YFAERLISK TLL+NSVMQKRS+NQIA+AFTYYR GALIS
Subjt:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRNLGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALIS

Query:  CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDGD
        CKYRD NKKFWQE NTE+IFYG+DDIDGASDIIIVEGE+DKLSMAEAG HNCVSVPDGAP  VS+KDVPPAD+D K+Q+LWNCKDYLNKASRIILATDGD
Subjt:  CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDGD

Query:  PPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLFNFKDYFDEIDAYYHKQFGNEFG
         PGQALAEEIARRVGRE              RCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPI GLF FKDYF EIDAYYHK+FGNEFG
Subjt:  PPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLFNFKDYFDEIDAYYHKQFGNEFG

Query:  ASTGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNASTGWKFVLCSMENKVRDHARKLLEKRIKKPFFAA-----------------------
          TGW+ LNDLYNVVPGELTIVTG+PNSGKSEWIDALLCNLNAS GWKF LCSMENKVR+H RKLLEK IKKPFF                         
Subjt:  ASTGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNASTGWKFVLCSMENKVRDHARKLLEKRIKKPFFAA-----------------------

Query:  -----RCDNESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTK--------------------LQNWSGGAPNMYDISGSA
             R + +SLPSI+WVLDLAKAAVLRHGVSGLVIDPYNELDHQR PNQTETEYVSQMLTK                    LQNWSG  PNMYDISGSA
Subjt:  -----RCDNESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTK--------------------LQNWSGGAPNMYDISGSA

Query:  HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESIRIE
        HFINKCDNGIVIHRNRDP+SGPIDL+QVCVRKVRNKVAGTIGEAYL YNRVTGEFLD    ++++
Subjt:  HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESIRIE

A0A6J1CKU2 twinkle homolog protein, chloroplastic/mitochondrial isoform X2

6.1e-270

81.69

Show/hide

Query:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRNLGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALIS
        GG AVW+CFRAKCGWKGRTLA+ADGRSSY +LG VAL + KRKITVESLQLEPLCDELVAYFAERLISKNTLL+NSVMQKRS+NQIAIAFTY+R G L+S
Subjt:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRNLGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALIS

Query:  CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDGD
        CKYRDVNKKFWQEANTEKIFYGLD IDGASDIIIVEGE+DKLSM EAGFHNCVSVPDGAPP VSQKDVPP D+DTKYQYLWNCK+YL+KASRIILATDGD
Subjt:  CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDGD

Query:  PPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLFNFKDYFDEIDAYYHKQFGNEFG
        PPGQALAEEIARRVGRE              RCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAEL+PIRGLF+FKDYFDEIDAYY K+FGNEFG
Subjt:  PPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLFNFKDYFDEIDAYYHKQFGNEFG

Query:  ASTGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNASTGWKFVLCSMENKVRDHARKLLEKRIKKPFFAA-----------------------
        ASTGWK LN LYNVVPGELTIVTGIPNSGKSEWIDALLCNLNAS GWKFVLCSMENKVR+HARKLLEKRIKKPFF A                       
Subjt:  ASTGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNASTGWKFVLCSMENKVRDHARKLLEKRIKKPFFAA-----------------------

Query:  -----RCDNESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTK--------------------LQNWSGGAPNMYDISGSA
             RC+NESLPSINWVLDLAKAAVLRHGV+GLVIDPYNELDHQRPPNQTETEYVSQMLTK                    LQNWSGGAPNMYDISGSA
Subjt:  -----RCDNESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTK--------------------LQNWSGGAPNMYDISGSA

Query:  HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESIRIEDQL
        HFINKCDNGIVIHRNRDP+SGP+DLLQVCVRKVRNKVAGTIGEA+L YNRVTGEFLD DE  RIE QL
Subjt:  HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESIRIEDQL

A0A6J1CLF6 twinkle homolog protein, chloroplastic/mitochondrial isoform X1

6.1e-270

81.69

Show/hide

Query:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRNLGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALIS
        GG AVW+CFRAKCGWKGRTLA+ADGRSSY +LG VAL + KRKITVESLQLEPLCDELVAYFAERLISKNTLL+NSVMQKRS+NQIAIAFTY+R G L+S
Subjt:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRNLGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALIS

Query:  CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDGD
        CKYRDVNKKFWQEANTEKIFYGLD IDGASDIIIVEGE+DKLSM EAGFHNCVSVPDGAPP VSQKDVPP D+DTKYQYLWNCK+YL+KASRIILATDGD
Subjt:  CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDGD

Query:  PPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLFNFKDYFDEIDAYYHKQFGNEFG
        PPGQALAEEIARRVGRE              RCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAEL+PIRGLF+FKDYFDEIDAYY K+FGNEFG
Subjt:  PPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLFNFKDYFDEIDAYYHKQFGNEFG

Query:  ASTGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNASTGWKFVLCSMENKVRDHARKLLEKRIKKPFFAA-----------------------
        ASTGWK LN LYNVVPGELTIVTGIPNSGKSEWIDALLCNLNAS GWKFVLCSMENKVR+HARKLLEKRIKKPFF A                       
Subjt:  ASTGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNASTGWKFVLCSMENKVRDHARKLLEKRIKKPFFAA-----------------------

Query:  -----RCDNESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTK--------------------LQNWSGGAPNMYDISGSA
             RC+NESLPSINWVLDLAKAAVLRHGV+GLVIDPYNELDHQRPPNQTETEYVSQMLTK                    LQNWSGGAPNMYDISGSA
Subjt:  -----RCDNESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTK--------------------LQNWSGGAPNMYDISGSA

Query:  HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESIRIEDQL
        HFINKCDNGIVIHRNRDP+SGP+DLLQVCVRKVRNKVAGTIGEA+L YNRVTGEFLD DE  RIE QL
Subjt:  HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESIRIEDQL

A0A6J1EH06 twinkle homolog protein, chloroplastic/mitochondrial isoform X1

6.1e-270

80.98

Show/hide

Query:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRNLGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALIS
        GG AVWMCFRAKCGWKGRTLA+ADGRSS++  G + LKQ KRKITVESLQLEPLCDELVAYFAERLISK+TLL+NSVMQKRSNNQI+IAFTY RRGALIS
Subjt:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRNLGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALIS

Query:  CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDGD
        CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPP  SQKDVPP DQDTKYQYLWNCKDYL+KASRIILATDGD
Subjt:  CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDGD

Query:  PPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLFNFKDYFDEIDAYYHKQFGNEFG
         PGQALAEEIARRVGRE              RCWRVKWPKKNE +HFKDANEVLMYLGPEAL+EVVDNAEL+PIRGLFNFK+YFDEID+YYHK+ GNEFG
Subjt:  PPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLFNFKDYFDEIDAYYHKQFGNEFG

Query:  ASTGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNASTGWKFVLCSMENKVRDHARKLLEKRIKKPFFA------------------------
          TGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLN S+GWKFVLCSMEN+VR+HARKLLEKRIKKPFF+                        
Subjt:  ASTGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNASTGWKFVLCSMENKVRDHARKLLEKRIKKPFFA------------------------

Query:  ----ARCDNESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTK--------------------LQNWSGGAPNMYDISGSA
            ARC+NESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRP +QTETEYVSQMLTK                    LQNWSGGAPNMYDISGSA
Subjt:  ----ARCDNESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTK--------------------LQNWSGGAPNMYDISGSA

Query:  HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESIRIEDQLSNQPY
        HFINKCDNGIVIHRNRDP+SGPIDL+QVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDES RIE +L    +
Subjt:  HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESIRIEDQLSNQPY

A0A6J1KLG2 twinkle homolog protein, chloroplastic/mitochondrial

5.5e-271

82.01

Show/hide

Query:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRNLGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALIS
        GG AVWMCFRAKCGWKGRTLA+ADGR S+++ G + LKQ KRKITVESLQLEPLCDELVAYFAERLISK+TLL+NSVMQKRSNNQI+IAFTY RRGALIS
Subjt:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRNLGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALIS

Query:  CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDGD
        CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPP  SQKDVPP DQDTKYQYLWNCKDYL+KASRIILATDGD
Subjt:  CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDGD

Query:  PPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLFNFKDYFDEIDAYYHKQFGNEFG
        PPGQALAEEIARRVGRE              RCWRVKWPKKNE +HFKDANEVLMYLGPEAL+EVVDNAEL+PIRGLFNFK+YFD+ID+YYHK+ GNEFG
Subjt:  PPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLFNFKDYFDEIDAYYHKQFGNEFG

Query:  ASTGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNASTGWKFVLCSMENKVRDHARKLLEKRIKKPFFAA-----------------------
          TGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLN S+GWKFVLCSMEN+VR+HARKLLEKRIKKPFF+A                       
Subjt:  ASTGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNASTGWKFVLCSMENKVRDHARKLLEKRIKKPFFAA-----------------------

Query:  -----RCDNESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTK--------------------LQNWSGGAPNMYDISGSA
             RC+NESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRP NQTETEYVSQMLTK                    LQNWSGGAPNMYDISGSA
Subjt:  -----RCDNESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTK--------------------LQNWSGGAPNMYDISGSA

Query:  HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESIRIEDQ
        HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDES RIE +
Subjt:  HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESIRIEDQ

SwissProt top hits

e value

%identity

Alignment

B5X582 Twinkle homolog protein, chloroplastic/mitochondrial

2.0e-201

60.73

Show/hide

Query:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRNLGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALIS
        G +A W CFR KCG KG     ADG  +  +     +++ +RKITVE ++LEPLCDE+  YFA R IS+ TL +N VMQKR  ++I IAFTY++RG L+S
Subjt:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRNLGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALIS

Query:  CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDGD
        CKYR + K F+QE  T +I YGLDDI+  S++IIVEGEIDKL+M EAGF NCVSVPDGAP  VS K++P  D+DTKY++LWNC DYL KASRI++ATDGD
Subjt:  CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDGD

Query:  PPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLFNFKDYFDEIDAYYHKQFGNEFG
         PGQA+AEEIARR+G+E              RCWRVKWPKK+E +HFKDANEVLM  GP  LKE + +AE YPI GLF+FKD+FDEIDAYY +  G+E+G
Subjt:  PPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLFNFKDYFDEIDAYYHKQFGNEFG

Query:  ASTGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNASTGWKFVLCSMENKVRDHARKLLEKRIKKPFFAA-----------------------
         STGWK L++LY+VVPGELT+VTGIPNSGKSEWIDA+LCNLN S GWKF LCSMENKVRDHARKLLEK IKKPFF A                       
Subjt:  ASTGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNASTGWKFVLCSMENKVRDHARKLLEKRIKKPFFAA-----------------------

Query:  -----RCDNESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTK--------------------LQNWSGGAPNMYDISGSA
             RC+ +SLPSI+WVL+ AKAAVLR+G+ GLVIDPYNELDHQR P QTETEYVSQMLTK                    LQ+W GGAPN+YDISGSA
Subjt:  -----RCDNESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTK--------------------LQNWSGGAPNMYDISGSA

Query:  HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESIRIEDQLSNQPY
        HFINKCDNGI++HRNRD ++GP+DL+Q+ VRKVRNKVAG IG+AYL Y+R TG + D+  +  + ++ S + Y
Subjt:  HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESIRIEDQLSNQPY

F4I6E6 Primase homolog protein

1.8e-85

58.7

Show/hide

Query:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRN-LGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALI
        G +A W C R KCG KG  +   DG+   ++ +G V     +RKITVES++LEPLCDE+  +FA R IS  TL +N VMQKR +++I IAFTY++RG L+
Subjt:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRN-LGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALI

Query:  SCKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDG
        SCKYR + KKF QE NT KI YGLDDI+  S+IIIVEGE DKL+M EAGF NCVSVPDGAP  VS K++P   +DT ++Y+WNC DYL KASRI++ATDG
Subjt:  SCKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDG

Query:  DPPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIR
        D PGQALAEE+ARR+G+E              RCW VKWPKK+E +HFKDANEVLM  GP  LKE + NAE YP++
Subjt:  DPPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIR

Arabidopsis top hits

e value

%identity

Alignment

AT1G30660.1 nucleic acid binding;nucleic acid binding

1.3e-86

58.7

Show/hide

Query:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRN-LGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALI
        G +A W C R KCG KG  +   DG+   ++ +G V     +RKITVES++LEPLCDE+  +FA R IS  TL +N VMQKR +++I IAFTY++RG L+
Subjt:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRN-LGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALI

Query:  SCKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDG
        SCKYR + KKF QE NT KI YGLDDI+  S+IIIVEGE DKL+M EAGF NCVSVPDGAP  VS K++P   +DT ++Y+WNC DYL KASRI++ATDG
Subjt:  SCKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDG

Query:  DPPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIR
        D PGQALAEE+ARR+G+E              RCW VKWPKK+E +HFKDANEVLM  GP  LKE + NAE YP++
Subjt:  DPPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIR

AT1G30680.1 toprim domain-containing protein

1.4e-202

60.73

Show/hide

Query:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRNLGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALIS
        G +A W CFR KCG KG     ADG  +  +     +++ +RKITVE ++LEPLCDE+  YFA R IS+ TL +N VMQKR  ++I IAFTY++RG L+S
Subjt:  GGTAVWMCFRAKCGWKGRTLAYADGRSSYRNLGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALIS

Query:  CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDGD
        CKYR + K F+QE  T +I YGLDDI+  S++IIVEGEIDKL+M EAGF NCVSVPDGAP  VS K++P  D+DTKY++LWNC DYL KASRI++ATDGD
Subjt:  CKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDGD

Query:  PPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLFNFKDYFDEIDAYYHKQFGNEFG
         PGQA+AEEIARR+G+E              RCWRVKWPKK+E +HFKDANEVLM  GP  LKE + +AE YPI GLF+FKD+FDEIDAYY +  G+E+G
Subjt:  PPGQALAEEIARRVGRERVVWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLFNFKDYFDEIDAYYHKQFGNEFG

Query:  ASTGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNASTGWKFVLCSMENKVRDHARKLLEKRIKKPFFAA-----------------------
         STGWK L++LY+VVPGELT+VTGIPNSGKSEWIDA+LCNLN S GWKF LCSMENKVRDHARKLLEK IKKPFF A                       
Subjt:  ASTGWKALNDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNASTGWKFVLCSMENKVRDHARKLLEKRIKKPFFAA-----------------------

Query:  -----RCDNESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTK--------------------LQNWSGGAPNMYDISGSA
             RC+ +SLPSI+WVL+ AKAAVLR+G+ GLVIDPYNELDHQR P QTETEYVSQMLTK                    LQ+W GGAPN+YDISGSA
Subjt:  -----RCDNESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTK--------------------LQNWSGGAPNMYDISGSA

Query:  HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESIRIEDQLSNQPY
        HFINKCDNGI++HRNRD ++GP+DL+Q+ VRKVRNKVAG IG+AYL Y+R TG + D+  +  + ++ S + Y
Subjt:  HFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESIRIEDQLSNQPY

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGGGGGACTGCTGTTTGGATGTGCTTTCGTGCAAAATGTGGTTGGAAAGGCCGTACTCTGGCCTATGCTGATGGTCGGTCATCGTATCGAAATTTAGGACATGTCGC
ACTTAAGCAGAACAAACGGAAGATTACAGTGGAGAGTCTACAACTTGAACCACTGTGCGATGAGCTGGTTGCTTATTTTGCTGAGCGATTGATATCCAAGAACACATTGT
TAAAAAATTCGGTTATGCAGAAAAGATCCAATAATCAGATCGCTATTGCATTTACGTATTATCGACGTGGAGCATTAATTAGTTGCAAGTATCGTGATGTCAACAAAAAG
TTCTGGCAGGAGGCCAATACTGAGAAAATATTTTATGGATTGGATGACATAGATGGCGCAAGTGATATCATCATAGTTGAAGGGGAGATAGACAAGCTTTCAATGGCAGA
AGCTGGTTTCCATAATTGCGTGAGTGTTCCAGATGGTGCACCACCATTAGTTTCCCAAAAGGATGTACCTCCTGCAGATCAGGATACGAAGTATCAGTATCTATGGAACT
GCAAAGACTACTTGAATAAGGCATCACGTATTATACTTGCTACTGATGGGGATCCTCCTGGTCAAGCTTTAGCAGAGGAGATTGCACGTCGTGTTGGGAGGGAAAGAGTA
GTTTGGCTAGTAACAGACATTTCCATTTCCATCTTTAGATGTTGGAGGGTCAAATGGCCAAAAAAGAATGAGGTCGATCATTTCAAAGATGCAAATGAGGTTCTGATGTA
CTTGGGCCCTGAGGCCCTGAAGGAAGTTGTTGACAATGCAGAGTTGTATCCTATACGTGGATTATTTAACTTCAAAGATTACTTCGACGAGATTGATGCATATTATCACA
AACAATTTGGAAATGAGTTTGGTGCCTCGACTGGATGGAAGGCTCTCAATGATTTGTACAATGTTGTCCCAGGGGAGCTTACCATTGTTACTGGTATTCCTAATTCAGGC
AAAAGCGAGTGGATTGATGCTCTGCTATGCAATCTTAATGCAAGTACTGGTTGGAAATTTGTTCTCTGCTCTATGGAAAATAAGGTTCGAGACCATGCAAGAAAACTATT
GGAGAAACGCATCAAGAAGCCTTTCTTTGCTGCGCGGTGTGACAATGAGTCCCTCCCAAGTATTAATTGGGTCTTGGATCTTGCAAAAGCAGCAGTTTTAAGGCATGGAG
TTTCTGGACTGGTAATTGACCCTTATAATGAGCTTGACCATCAACGGCCTCCAAACCAAACTGAAACAGAGTATGTGAGCCAGATGCTTACTAAGTTGCAGAACTGGTCT
GGAGGTGCACCTAATATGTATGATATAAGTGGAAGTGCACACTTCATAAACAAATGTGATAATGGAATTGTTATTCATCGTAATAGGGATCCAGACTCTGGTCCTATTGA
TCTCCTACAGGTATGCGTAAGGAAAGTGAGAAACAAGGTTGCTGGAACAATTGGGGAAGCTTATTTGGCATATAATAGGGTGACCGGAGAATTCTTGGATACGGACGAGT
CAATTAGAATAGAGGACCAACTGTCTAATCAACCATATTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGGTAVWMCFRAKCGWKGRTLAYADGRSSYRNLGHVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLKNSVMQKRSNNQIAIAFTYYRRGALISCKYRDVNKK
FWQEANTEKIFYGLDDIDGASDIIIVEGEIDKLSMAEAGFHNCVSVPDGAPPLVSQKDVPPADQDTKYQYLWNCKDYLNKASRIILATDGDPPGQALAEEIARRVGRERV
VWLVTDISISIFRCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPIRGLFNFKDYFDEIDAYYHKQFGNEFGASTGWKALNDLYNVVPGELTIVTGIPNSG
KSEWIDALLCNLNASTGWKFVLCSMENKVRDHARKLLEKRIKKPFFAARCDNESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETEYVSQMLTKLQNWS
GGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESIRIEDQLSNQPY

Lsi02G009880 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome