; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G010240 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G010240
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionsnRNA-activating protein complex subunit
Genome locationchr02:10700452..10704574
RNA-Seq ExpressionLsi02G010240
SyntenyLsi02G010240
Gene Ontology termsGO:0042795 - snRNA transcription by RNA polymerase II (biological process)
GO:0042796 - snRNA transcription by RNA polymerase III (biological process)
GO:0005634 - nucleus (cellular component)
GO:0019185 - snRNA-activating protein complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0001006 - RNA polymerase III type 3 promoter sequence-specific DNA binding (molecular function)
GO:0001046 - core promoter sequence-specific DNA binding (molecular function)
GO:0003681 - bent DNA binding (molecular function)
InterPro domainsIPR022042 - snRNA-activating protein complex, subunit 3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583805.1 snRNA-activating protein complex subunit, partial [Cucurbita argyrosperma subsp. sororia]1.3e-13588.06Show/hide
Query:  VKSLSSGKHETLQHPTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNS
        VKSLSS KHE LQHPTTVLFVE++HKSRKM+KTQEFLALGRQTLAELKDKIYC T+ LMEKAGQ DSSGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNS
Subjt:  VKSLSSGKHETLQHPTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNS

Query:  EDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAY
        EDEARKKW CIITGESQQKNSV+GEVSVSHVPHFRSVSM+K+RFCDLKFRLGAGYLYCHQ              GDCKHTIVIRDMRLIHPEDVHDR AY
Subjt:  EDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAY

Query:  PIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        PIVTFQLRTR +KCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDY+ D
Subjt:  PIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

TYK17049.1 snRNA-activating protein complex subunit-like isoform X1 [Cucumis melo var. makuwa]3.3e-13685.92Show/hide
Query:  MKPGSSNVTVKSLSSGKHETLQHPTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSK
        ++  +S+  VKSLS  KHE+L HPTTVLFVE++HKSRKMVK+QEFLALGRQTLAELKDKIYCSTD+LM+KA  QDSSGYFL+EDVFCNDLRNPSAIDYSK
Subjt:  MKPGSSNVTVKSLSSGKHETLQHPTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSK

Query:  PILDWLRNSEDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHP
        PILDWLRNSEDEARKKWECIITGESQQKNSVVGEVS  HVPHFRSVSM+KVRFCDLKFRLGAGYLYCHQ              GDCKHTIVIRDMRLIHP
Subjt:  PILDWLRNSEDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHP

Query:  EDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        EDVHDR AYPIVTFQLRTRA+KCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  EDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

TYK29378.1 snRNA-activating protein complex subunit-like isoform X3 [Cucumis melo var. makuwa]7.3e-13685.2Show/hide
Query:  MKPGSSNVTVKSLSSGKHETLQHPTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSK
        ++  +++  VKSL+ GKHE+L HP TVLFVE++HKSRKMVK+QEFLALGRQTLAELKDKIYCSTD+LM+KA QQDSSGYFL+EDVFCNDLRNPSAIDYSK
Subjt:  MKPGSSNVTVKSLSSGKHETLQHPTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSK

Query:  PILDWLRNSEDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHP
        PILDWLRNSEDEARKKWECIITGE QQKNSVVGEVS  HVPHFRSVSM+KVRFCDLKFRLGAGYLYCHQ              GDCKHTIVIRDMRLIHP
Subjt:  PILDWLRNSEDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHP

Query:  EDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        EDVHDR AYPIVTFQLRTRA+KCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  EDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

XP_038894484.1 snRNA-activating protein complex subunit isoform X3 [Benincasa hispida]2.5e-13688.81Show/hide
Query:  VKSLSSGKHETLQHPTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNS
        VKSLSSG+H TL+HPTTVLFVE++HKSRKMVKTQE L LG+Q LAELKDKIYCSTD+LMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSKPI DWL+NS
Subjt:  VKSLSSGKHETLQHPTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNS

Query:  EDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAY
        EDEARKKW CIITGESQQK+SVV EVSVSHVPHFRSV+MNKVRFCDLKFRLGAGYLYCHQ              GDCKHTIVIRDMRLIHPEDVHDRVAY
Subjt:  EDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAY

Query:  PIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        PIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  PIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

XP_038894485.1 snRNA-activating protein complex subunit isoform X4 [Benincasa hispida]2.5e-13688.81Show/hide
Query:  VKSLSSGKHETLQHPTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNS
        VKSLSSG+H TL+HPTTVLFVE++HKSRKMVKTQE L LG+Q LAELKDKIYCSTD+LMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSKPI DWL+NS
Subjt:  VKSLSSGKHETLQHPTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNS

Query:  EDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAY
        EDEARKKW CIITGESQQK+SVV EVSVSHVPHFRSV+MNKVRFCDLKFRLGAGYLYCHQ              GDCKHTIVIRDMRLIHPEDVHDRVAY
Subjt:  EDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAY

Query:  PIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        PIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  PIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

TrEMBL top hitse value%identityAlignment
A0A1S3CAL2 snRNA-activating protein complex subunit-like isoform X32.3e-13587.69Show/hide
Query:  VKSLSSGKHETLQHPTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNS
        VKSL+ GKHE+L HP TVLFVE++HKSRKMVK+QEFLALGRQTLAELKDKIYCSTD+LM+KA QQDSSGYFL+EDVFCNDLRNPSAIDYSKPILDWLRNS
Subjt:  VKSLSSGKHETLQHPTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNS

Query:  EDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAY
        EDEARKKWECIITGE QQKNSVVGEVS  HVPHFRSVSM+KVRFCDLKFRLGAGYLYCHQ              GDCKHTIVIRDMRLIHPEDVHDR AY
Subjt:  EDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAY

Query:  PIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        PIVTFQLRTRA+KCDVCNIYRAKK TLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  PIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

A0A1S4DZX0 snRNA-activating protein complex subunit-like6.1e-13688.43Show/hide
Query:  VKSLSSGKHETLQHPTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNS
        VKSLS  KHE+L HPTTVLFVE++HKSRKMVK+QEFLALGRQTLAELKDKIYCSTD+LM+KA  QDSSGYFL+EDVFCNDLRNPSAIDYSKPILDWLRNS
Subjt:  VKSLSSGKHETLQHPTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNS

Query:  EDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAY
        EDEARKKWECIITGESQQKNSVVGEVS  HVPHFRSVSM+KVRFCDLKFRLGAGYLYCHQ              GDCKHTIVIRDMRLIHPEDVHDR AY
Subjt:  EDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAY

Query:  PIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        PIVTFQLRTRA+KCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  PIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

A0A5D3D338 snRNA-activating protein complex subunit-like isoform X11.6e-13685.92Show/hide
Query:  MKPGSSNVTVKSLSSGKHETLQHPTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSK
        ++  +S+  VKSLS  KHE+L HPTTVLFVE++HKSRKMVK+QEFLALGRQTLAELKDKIYCSTD+LM+KA  QDSSGYFL+EDVFCNDLRNPSAIDYSK
Subjt:  MKPGSSNVTVKSLSSGKHETLQHPTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSK

Query:  PILDWLRNSEDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHP
        PILDWLRNSEDEARKKWECIITGESQQKNSVVGEVS  HVPHFRSVSM+KVRFCDLKFRLGAGYLYCHQ              GDCKHTIVIRDMRLIHP
Subjt:  PILDWLRNSEDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHP

Query:  EDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        EDVHDR AYPIVTFQLRTRA+KCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  EDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

A0A5D3E0W6 snRNA-activating protein complex subunit-like isoform X33.6e-13685.2Show/hide
Query:  MKPGSSNVTVKSLSSGKHETLQHPTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSK
        ++  +++  VKSL+ GKHE+L HP TVLFVE++HKSRKMVK+QEFLALGRQTLAELKDKIYCSTD+LM+KA QQDSSGYFL+EDVFCNDLRNPSAIDYSK
Subjt:  MKPGSSNVTVKSLSSGKHETLQHPTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSK

Query:  PILDWLRNSEDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHP
        PILDWLRNSEDEARKKWECIITGE QQKNSVVGEVS  HVPHFRSVSM+KVRFCDLKFRLGAGYLYCHQ              GDCKHTIVIRDMRLIHP
Subjt:  PILDWLRNSEDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHP

Query:  EDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        EDVHDR AYPIVTFQLRTRA+KCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  EDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

A0A6J1ENK2 snRNA-activating protein complex subunit6.1e-13688.06Show/hide
Query:  VKSLSSGKHETLQHPTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNS
        VKSLSS KHE LQHPTTVLFVE++HKSRKM+KTQEFLALGRQTLAELKDKIYC T+ LMEKAGQ DSSGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNS
Subjt:  VKSLSSGKHETLQHPTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNS

Query:  EDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAY
        EDEARKKW CIITGESQQKNSV+GEVSVSHVPHFRSVSM+K+RFCDLKFRLGAGYLYCHQ              GDCKHTIVIRDMRLIHPEDVHDR AY
Subjt:  EDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAY

Query:  PIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        PIVTFQLRTR +KCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDY+ D
Subjt:  PIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

SwissProt top hitse value%identityAlignment
Q4R6Y6 snRNA-activating protein complex subunit 35.4e-3333.97Show/hide
Query:  VLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTD--------SLMEKAGQQDS-----SGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNSEDEA
        +L+  IFHK ++    Q  L LG Q L EL+D I C +D        +  ++A +  S     S +F  E  F ND R P   D S+ I++W   S D  
Subjt:  VLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTD--------SLMEKAGQQDS-----SGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNSEDEA

Query:  RKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAYPIVT
          K                          F++  M    F DL  +LG  YLYCHQ              GDC+H IVI D+RL+H +D  DR  YP++ 
Subjt:  RKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAYPIVT

Query:  FQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL
         +     RKC VC +Y A+ VT +D +A E+PC+FC+ C+ +LHY  EGN L  +F+ + Y+
Subjt:  FQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL

Q5BK68 snRNA-activating protein complex subunit 33.2e-3333.97Show/hide
Query:  VLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTD--------SLMEKAGQQDS-----SGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNSEDEA
        +L+  IF+K R+    Q  L LG Q L EL+D I C +D        +  ++A +  S     S +F  E  F ND R P   D S+ I++W   S D  
Subjt:  VLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTD--------SLMEKAGQQDS-----SGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNSEDEA

Query:  RKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAYPIVT
          K                          F++  M    F DL  +LG  YLYCHQ              GDC+H +VI D+RL+H +D  DR  YP++T
Subjt:  RKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAYPIVT

Query:  FQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL
         +     RKC VC +Y A+ VT +D +A E+PC+FC+ C+ +LHY  EGN L  +F+ + Y+
Subjt:  FQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL

Q5E9M5 snRNA-activating protein complex subunit 35.4e-3333.59Show/hide
Query:  VLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTD--------SLMEKAGQQDS-----SGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNSEDEA
        +L+  IFHK ++    Q  L LG Q L EL+D I C +D        +  ++A +  S     S +F  E  F ND R P   D S+ I++W   S D  
Subjt:  VLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTD--------SLMEKAGQQDS-----SGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNSEDEA

Query:  RKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAYPIVT
          K                          F++  M    F DL  +LG  YLYCHQ              GDC+H +VI D+RL+H +D  DR  YP++ 
Subjt:  RKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAYPIVT

Query:  FQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL
         +     RKC VC +Y A+ VT +D +A E+PC+FC+ C+ +LHY  EGN L  +F+ + Y+
Subjt:  FQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL

Q8L627 snRNA-activating protein complex subunit1.4e-7658.82Show/hide
Query:  PTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITG
        P  +L VEI++ SRK VKTQEFL LGRQ L ELKD I+C+TD +M+KAG+ D SGYFLIEDVF NDLRNPSA DYS PILDWL NS+DEA KKWEC++TG
Subjt:  PTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITG

Query:  ESQQKNS-VVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARK
        E Q+K   V+GE     +P +R+  M    FCD++FR+GA Y+YCHQ              GDCKHTIVIRDMR+ HPEDV +R AYPI+ F  + R +K
Subjt:  ESQQKNS-VVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARK

Query:  CDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        C VC I RA KV +DDKWA EN  YFC+ C+ LLH S+EG  L  DF V DY+ +
Subjt:  CDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

Q9D2C9 snRNA-activating protein complex subunit 37.1e-3333.59Show/hide
Query:  VLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTD--------SLMEKAGQQDS-----SGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNSEDEA
        +L+  IF+K ++    Q  L LG Q L EL+D I C +D        +  ++A +  S     S +F  E  F ND R P   D S+ I++W   S D  
Subjt:  VLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTD--------SLMEKAGQQDS-----SGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNSEDEA

Query:  RKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAYPIVT
          K                          F++  M    F DL  +LG  YLYCHQ              GDC+H +VI D+RL+H +D  DR  YP++T
Subjt:  RKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAYPIVT

Query:  FQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL
         +     RKC VC +Y A+ VT +D +A E+PC+FC+ C+ +LHY  EGN L  +F+ + Y+
Subjt:  FQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL

Arabidopsis top hitse value%identityAlignment
AT1G28560.1 snRNA activating complex family protein9.7e-7858.82Show/hide
Query:  PTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITG
        P  +L VEI++ SRK VKTQEFL LGRQ L ELKD I+C+TD +M+KAG+ D SGYFLIEDVF NDLRNPSA DYS PILDWL NS+DEA KKWEC++TG
Subjt:  PTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITG

Query:  ESQQKNS-VVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARK
        E Q+K   V+GE     +P +R+  M    FCD++FR+GA Y+YCHQ              GDCKHTIVIRDMR+ HPEDV +R AYPI+ F  + R +K
Subjt:  ESQQKNS-VVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARK

Query:  CDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        C VC I RA KV +DDKWA EN  YFC+ C+ LLH S+EG  L  DF V DY+ +
Subjt:  CDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

AT1G28560.2 snRNA activating complex family protein9.7e-7858.82Show/hide
Query:  PTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITG
        P  +L VEI++ SRK VKTQEFL LGRQ L ELKD I+C+TD +M+KAG+ D SGYFLIEDVF NDLRNPSA DYS PILDWL NS+DEA KKWEC++TG
Subjt:  PTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITG

Query:  ESQQKNS-VVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARK
        E Q+K   V+GE     +P +R+  M    FCD++FR+GA Y+YCHQ              GDCKHTIVIRDMR+ HPEDV +R AYPI+ F  + R +K
Subjt:  ESQQKNS-VVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARK

Query:  CDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        C VC I RA KV +DDKWA EN  YFC+ C+ LLH S+EG  L  DF V DY+ +
Subjt:  CDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCTGGCTCTAGCAATGTGACGGTGAAATCACTGAGCAGTGGAAAACACGAAACTCTGCAGCATCCAACGACTGTACTTTTTGTAGAGATTTTCCATAAATCTCG
CAAGATGGTGAAGACTCAAGAGTTTTTGGCCCTTGGACGACAAACGTTAGCAGAACTGAAGGACAAGATTTATTGCTCGACAGATTCGTTAATGGAAAAGGCTGGGCAGC
AAGATTCGTCTGGATATTTCCTTATAGAAGATGTTTTCTGCAATGATTTGAGGAATCCTTCCGCAATAGATTATAGCAAACCTATACTTGATTGGCTTAGAAACTCGGAG
GATGAAGCGCGTAAGAAATGGGAATGCATCATAACTGGTGAATCACAACAGAAAAATTCAGTCGTTGGCGAAGTATCAGTTTCACATGTGCCTCATTTTAGATCAGTCAG
CATGAACAAGGTTCGATTTTGTGACCTGAAATTTAGGCTTGGGGCCGGGTATCTGTACTGTCATCAGATTGTGTGGCTTTCATTTCAAAGTAAAAGCCAAAGTCATATGG
GAGATTGCAAGCATACCATAGTGATTAGAGATATGAGGTTGATCCATCCTGAGGACGTACATGATCGTGTTGCTTATCCAATCGTTACATTTCAGCTTAGGACCCGAGCT
CGGAAATGTGATGTCTGTAACATTTACAGGGCTAAGAAGGTTACTCTTGACGATAAGTGGGCACAGGAAAACCCGTGCTACTTTTGTGAAGACTGCTATTTTCTTCTTCA
CTACTCGAAAGAAGGGAACCTCCTTTACAATGATTTCGTGGTGCACGATTACTTGCAAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGCCTGGCTCTAGCAATGTGACGGTGAAATCACTGAGCAGTGGAAAACACGAAACTCTGCAGCATCCAACGACTGTACTTTTTGTAGAGATTTTCCATAAATCTCG
CAAGATGGTGAAGACTCAAGAGTTTTTGGCCCTTGGACGACAAACGTTAGCAGAACTGAAGGACAAGATTTATTGCTCGACAGATTCGTTAATGGAAAAGGCTGGGCAGC
AAGATTCGTCTGGATATTTCCTTATAGAAGATGTTTTCTGCAATGATTTGAGGAATCCTTCCGCAATAGATTATAGCAAACCTATACTTGATTGGCTTAGAAACTCGGAG
GATGAAGCGCGTAAGAAATGGGAATGCATCATAACTGGTGAATCACAACAGAAAAATTCAGTCGTTGGCGAAGTATCAGTTTCACATGTGCCTCATTTTAGATCAGTCAG
CATGAACAAGGTTCGATTTTGTGACCTGAAATTTAGGCTTGGGGCCGGGTATCTGTACTGTCATCAGATTGTGTGGCTTTCATTTCAAAGTAAAAGCCAAAGTCATATGG
GAGATTGCAAGCATACCATAGTGATTAGAGATATGAGGTTGATCCATCCTGAGGACGTACATGATCGTGTTGCTTATCCAATCGTTACATTTCAGCTTAGGACCCGAGCT
CGGAAATGTGATGTCTGTAACATTTACAGGGCTAAGAAGGTTACTCTTGACGATAAGTGGGCACAGGAAAACCCGTGCTACTTTTGTGAAGACTGCTATTTTCTTCTTCA
CTACTCGAAAGAAGGGAACCTCCTTTACAATGATTTCGTGGTGCACGATTACTTGCAAGATTAGGTGACTAGGTTGTTTAAGAATGCTTCTCACTGATGCCCAATTCACA
GATGAAAATGCCTTAAATATTCATGCTCATTGAGATTCATTCAACAGTTTTGATGATGTTGAGTTGGTTCTGTTAGTAGCCAAAATCCAGTCATCTTGGCTGGTGCCACA
ACTCCAGAATTAGAGGCTAAAAGTAAATGGTTACTTATTTTATTTTTTTATTTAATTTTATTTTTACTTTTTGGGGTTGGTCGTCTTGGAGAATTTGTACAATGGAGGAC
TCTTCTTATATTGGGTTTTTATGAAAGGAAAGGTAAATTATTTTTTAGGGATTAAAAATGTAATTTTTAATATAACTTTTTTAAATCACAATTTGAACACAAACACTATG
CTCAATAATATTATGAAATGTTGTTCTACTTTAAA
Protein sequenceShow/hide protein sequence
MKPGSSNVTVKSLSSGKHETLQHPTTVLFVEIFHKSRKMVKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEDVFCNDLRNPSAIDYSKPILDWLRNSE
DEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNKVRFCDLKFRLGAGYLYCHQIVWLSFQSKSQSHMGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRA
RKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD